Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_pT_E13
         (792 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z93778-8|CAB07848.4|  437|Caenorhabditis elegans Hypothetical pr...   364   e-101
AL034364-5|CAA22255.4|  437|Caenorhabditis elegans Hypothetical ...   364   e-101
AF136150-1|AAF61419.1|  437|Caenorhabditis elegans homogentisate...   364   e-101
U95181-1|AAD00776.1|  437|Caenorhabditis elegans 2,5 dihydroxyph...   360   e-100
AC024775-1|AAK68455.1|  456|Caenorhabditis elegans Hypothetical ...    30   2.2  
Z50872-1|CAA90754.2| 1052|Caenorhabditis elegans Hypothetical pr...    29   2.9  
D63575-1|BAA09794.1|  146|Caenorhabditis elegans galectin protein.     28   6.7  

>Z93778-8|CAB07848.4|  437|Caenorhabditis elegans Hypothetical
           protein W06D4.1 protein.
          Length = 437

 Score =  364 bits (895), Expect = e-101
 Identities = 165/238 (69%), Positives = 183/238 (76%)
 Frame = -2

Query: 791 RGYILEVFDGHFKLPDXGPIGXNGLANPRDFXTPVAHYVDEETPGFQIFNKYQGFLFVAE 612
           RGYILEV+  HF+LPD GPIG NGLANPRDF  PVA + D +   F I NKYQG  F A+
Sbjct: 200 RGYILEVYGTHFQLPDLGPIGANGLANPRDFEAPVAWFEDLDVE-FTIINKYQGSWFQAK 258

Query: 611 QNHNPFDVVAWHGNYVPYKYDLNNFMVINAVLYDHCDPSIFTVLTCPSAKPGIAIADFVI 432
           Q H+PFDVV WHGNYVPYKYDL  FMVIN V +DHCDPSIFTVLT PS K G AIADFVI
Sbjct: 259 QGHSPFDVVGWHGNYVPYKYDLKKFMVINTVSFDHCDPSIFTVLTAPSVKHGTAIADFVI 318

Query: 431 FPPRWSVQEHTFRPPYYHRNCMSEFMGLILGSYEAKEGGFLPGGASLHSMMTPHGPDDKC 252
           FPPRW   ++TFRPPYYHRNCMSE+MGLI G YEAKEGGF PGG SLHSMMTPHGPD  C
Sbjct: 319 FPPRWGCADNTFRPPYYHRNCMSEYMGLITGCYEAKEGGFKPGGGSLHSMMTPHGPDFNC 378

Query: 251 FNAASNGALVPQKIAVGTQAFMFESSLSLAITKWGAETCQKLDPKYYECWQNLPKHFS 78
           F  ASN  L PQ++A GT +FMFESSL++AIT W     Q +D  YY+ WQ L KHF+
Sbjct: 379 FEMASNADLKPQRVAEGTMSFMFESSLNMAITNWA--VYQNVDKDYYKDWQPLKKHFT 434


>AL034364-5|CAA22255.4|  437|Caenorhabditis elegans Hypothetical
           protein W06D4.1 protein.
          Length = 437

 Score =  364 bits (895), Expect = e-101
 Identities = 165/238 (69%), Positives = 183/238 (76%)
 Frame = -2

Query: 791 RGYILEVFDGHFKLPDXGPIGXNGLANPRDFXTPVAHYVDEETPGFQIFNKYQGFLFVAE 612
           RGYILEV+  HF+LPD GPIG NGLANPRDF  PVA + D +   F I NKYQG  F A+
Sbjct: 200 RGYILEVYGTHFQLPDLGPIGANGLANPRDFEAPVAWFEDLDVE-FTIINKYQGSWFQAK 258

Query: 611 QNHNPFDVVAWHGNYVPYKYDLNNFMVINAVLYDHCDPSIFTVLTCPSAKPGIAIADFVI 432
           Q H+PFDVV WHGNYVPYKYDL  FMVIN V +DHCDPSIFTVLT PS K G AIADFVI
Sbjct: 259 QGHSPFDVVGWHGNYVPYKYDLKKFMVINTVSFDHCDPSIFTVLTAPSVKHGTAIADFVI 318

Query: 431 FPPRWSVQEHTFRPPYYHRNCMSEFMGLILGSYEAKEGGFLPGGASLHSMMTPHGPDDKC 252
           FPPRW   ++TFRPPYYHRNCMSE+MGLI G YEAKEGGF PGG SLHSMMTPHGPD  C
Sbjct: 319 FPPRWGCADNTFRPPYYHRNCMSEYMGLITGCYEAKEGGFKPGGGSLHSMMTPHGPDFNC 378

Query: 251 FNAASNGALVPQKIAVGTQAFMFESSLSLAITKWGAETCQKLDPKYYECWQNLPKHFS 78
           F  ASN  L PQ++A GT +FMFESSL++AIT W     Q +D  YY+ WQ L KHF+
Sbjct: 379 FEMASNADLKPQRVAEGTMSFMFESSLNMAITNWA--VYQNVDKDYYKDWQPLKKHFT 434


>AF136150-1|AAF61419.1|  437|Caenorhabditis elegans homogentisate
           1,2-dioxygenase protein.
          Length = 437

 Score =  364 bits (895), Expect = e-101
 Identities = 165/238 (69%), Positives = 183/238 (76%)
 Frame = -2

Query: 791 RGYILEVFDGHFKLPDXGPIGXNGLANPRDFXTPVAHYVDEETPGFQIFNKYQGFLFVAE 612
           RGYILEV+  HF+LPD GPIG NGLANPRDF  PVA + D +   F I NKYQG  F A+
Sbjct: 200 RGYILEVYGTHFQLPDLGPIGANGLANPRDFEAPVAWFEDLDVE-FTIINKYQGSWFQAK 258

Query: 611 QNHNPFDVVAWHGNYVPYKYDLNNFMVINAVLYDHCDPSIFTVLTCPSAKPGIAIADFVI 432
           Q H+PFDVV WHGNYVPYKYDL  FMVIN V +DHCDPSIFTVLT PS K G AIADFVI
Sbjct: 259 QGHSPFDVVGWHGNYVPYKYDLKKFMVINTVSFDHCDPSIFTVLTAPSVKHGTAIADFVI 318

Query: 431 FPPRWSVQEHTFRPPYYHRNCMSEFMGLILGSYEAKEGGFLPGGASLHSMMTPHGPDDKC 252
           FPPRW   ++TFRPPYYHRNCMSE+MGLI G YEAKEGGF PGG SLHSMMTPHGPD  C
Sbjct: 319 FPPRWGCADNTFRPPYYHRNCMSEYMGLITGCYEAKEGGFKPGGGSLHSMMTPHGPDFNC 378

Query: 251 FNAASNGALVPQKIAVGTQAFMFESSLSLAITKWGAETCQKLDPKYYECWQNLPKHFS 78
           F  ASN  L PQ++A GT +FMFESSL++AIT W     Q +D  YY+ WQ L KHF+
Sbjct: 379 FEMASNADLKPQRVAEGTMSFMFESSLNMAITNWA--VYQNVDKDYYKDWQPLKKHFT 434


>U95181-1|AAD00776.1|  437|Caenorhabditis elegans 2,5
           dihydroxyphenylacetate oxidase protein.
          Length = 437

 Score =  360 bits (886), Expect = e-100
 Identities = 163/238 (68%), Positives = 183/238 (76%)
 Frame = -2

Query: 791 RGYILEVFDGHFKLPDXGPIGXNGLANPRDFXTPVAHYVDEETPGFQIFNKYQGFLFVAE 612
           RGYILEV+  HF+LPD GPIG NGLANPRDF  PVA + D +   F I NKYQG  F A+
Sbjct: 200 RGYILEVYGTHFQLPDLGPIGANGLANPRDFEAPVAWFEDLDGE-FTIINKYQGSWFQAK 258

Query: 611 QNHNPFDVVAWHGNYVPYKYDLNNFMVINAVLYDHCDPSIFTVLTCPSAKPGIAIADFVI 432
           Q H+PF+VV WHGNYVPYKYDL  FMVIN V +DHCDPSIFTVLT PS K G AIADFVI
Sbjct: 259 QGHSPFEVVGWHGNYVPYKYDLKKFMVINTVSFDHCDPSIFTVLTAPSVKHGTAIADFVI 318

Query: 431 FPPRWSVQEHTFRPPYYHRNCMSEFMGLILGSYEAKEGGFLPGGASLHSMMTPHGPDDKC 252
           FPPRW   ++TFRPPYYHRNCMSE+MGLI G YEAKEGGF PGG SLHSMMTPHGPD  C
Sbjct: 319 FPPRWGCADNTFRPPYYHRNCMSEYMGLITGCYEAKEGGFKPGGGSLHSMMTPHGPDFNC 378

Query: 251 FNAASNGALVPQKIAVGTQAFMFESSLSLAITKWGAETCQKLDPKYYECWQNLPKHFS 78
           F  ASN  L PQ++A GT +FMFESSL++AIT W     Q +D  YY+ WQ L KH++
Sbjct: 379 FEMASNADLKPQRVAEGTMSFMFESSLNMAITNWA--VYQNVDKDYYKDWQPLKKHYT 434


>AC024775-1|AAK68455.1|  456|Caenorhabditis elegans Hypothetical
           protein Y41D4A.5 protein.
          Length = 456

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 20/48 (41%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
 Frame = +3

Query: 72  FIRE-MLWQVLPTFVIFG-VQFLTGFRAPLGDGQTQRRFKHKSLSSYC 209
           FIRE M  + L +  IFG V  L   RA +   Q Q +F H+ ++SYC
Sbjct: 308 FIREQMKAETLHSIDIFGLVMTLRKQRASMVQTQDQFQFVHRCIASYC 355


>Z50872-1|CAA90754.2| 1052|Caenorhabditis elegans Hypothetical
           protein C05D12.2 protein.
          Length = 1052

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = -3

Query: 544 TTLWLSTLFCTIIVTLQYLRC*RVLLQNLGSP 449
           T  W S +F  ++V LQ + C     QN G+P
Sbjct: 3   TKQWCSIIFIVVLVFLQEITCQSAKCQNFGTP 34


>D63575-1|BAA09794.1|  146|Caenorhabditis elegans galectin protein.
          Length = 146

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 15/44 (34%), Positives = 20/44 (45%)
 Frame = -1

Query: 486 GVDVSFCKTWDRHR*FRNIPTQMVCAGAHFQTSLLPQKLYERVH 355
           G+ +SFC  +   +   NIP Q    GA  +  LLP     R H
Sbjct: 5   GIGISFCNEFFNPQTPVNIPVQGFSNGARLRLVLLPTSADSRFH 48


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,577,316
Number of Sequences: 27780
Number of extensions: 450953
Number of successful extensions: 1104
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1019
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1096
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1924757034
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)