Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P04_pT_E13
(792 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ869053-1|ABJ09600.1| 459|Apis mellifera capa-like receptor pr... 25 0.81
DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like recept... 24 1.4
Z26318-1|CAA81227.1| 544|Apis mellifera royal jelly protein RJP... 23 2.5
DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein. 22 5.7
AB208108-1|BAE72140.1| 92|Apis mellifera Broad complex zinc fi... 22 7.5
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 21 9.9
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 21 9.9
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 21 9.9
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 21 9.9
DQ015969-1|AAY81926.1| 397|Apis mellifera stargazin related pro... 21 9.9
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 21 9.9
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 21 9.9
>DQ869053-1|ABJ09600.1| 459|Apis mellifera capa-like receptor
protein.
Length = 459
Score = 25.0 bits (52), Expect = 0.81
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = +3
Query: 330 LVRTKNQPHELAHTVSVVIRRSESVLLHRPSGWEYYEISDGD 455
L+ T+ +E+ + + SVL+H +G Y+ISD D
Sbjct: 410 LLTTEKDNNEIVTAQFLNQLKKSSVLVHTKNGRLKYQISDND 451
>DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like receptor
2 protein.
Length = 581
Score = 24.2 bits (50), Expect = 1.4
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +3
Query: 78 REMLWQVLPTFVIFGVQFLTG 140
R+ L+ VLP VI+ V F+TG
Sbjct: 47 RDPLYIVLPITVIYAVIFVTG 67
>Z26318-1|CAA81227.1| 544|Apis mellifera royal jelly protein
RJP57-1 protein.
Length = 544
Score = 23.4 bits (48), Expect = 2.5
Identities = 11/44 (25%), Positives = 19/44 (43%), Gaps = 6/44 (13%)
Frame = -3
Query: 127 WTPNITNVGKTCQSISRI------KQKSNXIHKNKILYDMYHFD 14
W + +G CQ ++ K +N H K++Y+ H D
Sbjct: 4 WLLLVVCLGIACQDVTSAAVNHQRKSANNLAHSMKVIYEWKHID 47
>DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein.
Length = 828
Score = 22.2 bits (45), Expect = 5.7
Identities = 13/46 (28%), Positives = 21/46 (45%)
Frame = +2
Query: 29 VIQNLIFVNXIRLLLYPRNALAGFANIRNIWGPIFDRFPRPTW*WP 166
++ N I N + +L+ P+ L + W P+ D P TW P
Sbjct: 505 LLPNWILENILDMLVLPKLTL----EVEE-WNPLTDTVPIHTWIHP 545
>AB208108-1|BAE72140.1| 92|Apis mellifera Broad complex zinc
finger domain-Z3 isoform protein.
Length = 92
Score = 21.8 bits (44), Expect = 7.5
Identities = 6/14 (42%), Positives = 10/14 (71%)
Frame = -2
Query: 113 YECWQNLPKHFSDK 72
+ C+ +L +HF DK
Sbjct: 15 FSCYYSLKRHFQDK 28
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 21.4 bits (43), Expect = 9.9
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -2
Query: 587 VAWHGNYVPYKYDL 546
V+W GNY K DL
Sbjct: 250 VSWRGNYSCLKVDL 263
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 21.4 bits (43), Expect = 9.9
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -2
Query: 587 VAWHGNYVPYKYDL 546
V+W GNY K DL
Sbjct: 301 VSWRGNYSCLKVDL 314
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 21.4 bits (43), Expect = 9.9
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -2
Query: 587 VAWHGNYVPYKYDL 546
V+W GNY K DL
Sbjct: 250 VSWRGNYSCLKVDL 263
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 21.4 bits (43), Expect = 9.9
Identities = 12/37 (32%), Positives = 18/37 (48%)
Frame = +2
Query: 194 PEFLLQFSAALVLHWMQR*NICRQAREVSSWNAETHR 304
P L FS+ V ++ + A + SSW +THR
Sbjct: 146 PTTCLVFSSGSVSCVPSVKHVAKCATDFSSWPYDTHR 182
>DQ015969-1|AAY81926.1| 397|Apis mellifera stargazin related
protein STG-1 protein.
Length = 397
Score = 21.4 bits (43), Expect = 9.9
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = +1
Query: 403 CSCTDHLGGNITKSAMAIPGFAEG 474
C C D+LGG + SA + A G
Sbjct: 13 CWCCDNLGGPGSSSAGGVVTGASG 36
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 21.4 bits (43), Expect = 9.9
Identities = 8/21 (38%), Positives = 13/21 (61%)
Frame = -1
Query: 177 FFESGHHQVGRGNLSKIGPQI 115
F+ +G +VG G SK+ Q+
Sbjct: 1287 FWVTGSTRVGEGQSSKVAAQV 1307
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 21.4 bits (43), Expect = 9.9
Identities = 8/21 (38%), Positives = 13/21 (61%)
Frame = -1
Query: 177 FFESGHHQVGRGNLSKIGPQI 115
F+ +G +VG G SK+ Q+
Sbjct: 1283 FWVTGSTRVGEGQSSKVAAQV 1303
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 234,747
Number of Sequences: 438
Number of extensions: 5695
Number of successful extensions: 14
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25003662
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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