Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P04_pT_E07
(688 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U96074-1|AAC78728.1| 320|Homo sapiens translation initiation fa... 170 3e-42
CR457134-1|CAG33415.1| 320|Homo sapiens EIF3S4 protein. 170 3e-42
BT006889-1|AAP35535.1| 320|Homo sapiens eukaryotic translation ... 170 3e-42
BC008469-1|AAH08469.1| 320|Homo sapiens eukaryotic translation ... 170 3e-42
BC000733-1|AAH00733.1| 320|Homo sapiens eukaryotic translation ... 170 3e-42
AF094850-1|AAG15419.1| 320|Homo sapiens eukaryotic translation ... 170 3e-42
AF092453-1|AAG15396.1| 320|Homo sapiens eukaryotic translation ... 170 3e-42
AF020833-1|AAB71866.1| 320|Homo sapiens eukaryotic translation ... 170 3e-42
BC010939-1|AAH10939.1| 306|Homo sapiens poly(A) binding protein... 39 0.019
AF026029-1|AAC39596.1| 306|Homo sapiens poly(A) binding protein... 39 0.019
U53209-1|AAC50658.1| 282|Homo sapiens transformer-2 alpha protein. 38 0.034
BC017094-1|AAH17094.1| 282|Homo sapiens transformer-2 alpha pro... 38 0.034
AC023105-1|AAQ96870.1| 282|Homo sapiens unknown protein. 38 0.034
AB097048-1|BAC77401.1| 282|Homo sapiens putative MAPK activatin... 38 0.034
BC024238-1|AAH24238.1| 293|Homo sapiens MKI67 (FHA domain) inte... 37 0.077
BC022990-1|AAH22990.1| 293|Homo sapiens MKI67 (FHA domain) inte... 37 0.077
AC018737-1|AAY14830.1| 293|Homo sapiens unknown protein. 37 0.077
AB044971-1|BAB41210.1| 293|Homo sapiens nucleolar phosphoprotei... 37 0.077
D26068-1|BAA05063.1| 230|Homo sapiens KIAA0038 protein. 36 0.10
BC066928-1|AAH66928.1| 228|Homo sapiens eukaryotic translation ... 36 0.10
BC021214-1|AAH21214.1| 228|Homo sapiens eukaryotic translation ... 36 0.10
BC010021-1|AAH10021.1| 228|Homo sapiens eukaryotic translation ... 36 0.10
AF045555-2|AAF75557.1| 228|Homo sapiens wbscr1 protein. 36 0.10
AF045555-1|AAC04859.2| 248|Homo sapiens wbscr1 alternative spli... 36 0.10
AC005057-2|AAS07440.1| 136|Homo sapiens unknown protein. 36 0.10
AC005057-1|AAS07439.1| 156|Homo sapiens unknown protein. 36 0.10
X64044-1|CAA45409.1| 475|Homo sapiens splicing factor U2AF prot... 36 0.18
BC030574-1|AAH30574.1| 471|Homo sapiens U2 small nuclear RNA au... 36 0.18
BC008740-1|AAH08740.1| 471|Homo sapiens U2 small nuclear RNA au... 36 0.18
BC006137-1|AAH06137.1| 960|Homo sapiens RBM19 protein protein. 36 0.18
BC004289-1|AAH04289.1| 960|Homo sapiens RBM19 protein protein. 36 0.18
AB014582-1|BAA31657.2| 973|Homo sapiens KIAA0682 protein protein. 36 0.18
AB046799-1|BAB13405.1| 704|Homo sapiens KIAA1579 protein protein. 35 0.31
U02019-1|AAC50056.1| 286|Homo sapiens p37 AUF1 protein. 34 0.41
D55674-1|BAA09525.1| 355|Homo sapiens heterogeneous nuclear rib... 34 0.41
D55673-1|BAA09524.1| 215|Homo sapiens heterogeneous nuclear rib... 34 0.41
D55672-1|BAA09523.1| 306|Homo sapiens heterogeneous nuclear rib... 34 0.41
D55671-1|BAA09522.1| 267|Homo sapiens heterogeneous nuclear rib... 34 0.41
BC026015-1|AAH26015.1| 306|Homo sapiens heterogeneous nuclear r... 34 0.41
BC023977-1|AAH23977.1| 306|Homo sapiens heterogeneous nuclear r... 34 0.41
BC002401-1|AAH02401.1| 355|Homo sapiens heterogeneous nuclear r... 34 0.41
AF039575-1|AAB96683.1| 298|Homo sapiens heterogeneous nuclear r... 34 0.41
AF026126-3|AAC23476.1| 336|Homo sapiens heterogeneous nuclear r... 34 0.41
AF026126-2|AAC23475.1| 306|Homo sapiens heterogeneous nuclear r... 34 0.41
AF026126-1|AAC23474.1| 355|Homo sapiens heterogeneous nuclear r... 34 0.41
AC124016-1|AAY40913.1| 355|Homo sapiens unknown protein. 34 0.41
CR541823-1|CAG46622.1| 174|Homo sapiens RBM8A protein. 34 0.55
CR541805-1|CAG46604.1| 174|Homo sapiens RBM8A protein. 34 0.55
BC071577-1|AAH71577.1| 174|Homo sapiens RNA binding motif prote... 34 0.55
BC017088-1|AAH17088.1| 174|Homo sapiens RNA binding motif prote... 34 0.55
AF403012-1|AAL26999.1| 174|Homo sapiens ribonucleoprotein RBM8 ... 34 0.55
AF299118-1|AAG27091.1| 174|Homo sapiens RNA-binding protein Y14... 34 0.55
AF231512-1|AAG16782.1| 158|Homo sapiens RNA binding motif prote... 34 0.55
AF231511-1|AAG16781.1| 173|Homo sapiens RNA binding motif prote... 34 0.55
AF198620-1|AAF37551.1| 173|Homo sapiens RNA binding motif prote... 34 0.55
AF182415-1|AAG14951.1| 158|Homo sapiens MDS014 protein. 34 0.55
AF127761-1|AAD21089.1| 174|Homo sapiens ribonucleoprotein RBM8 ... 34 0.55
U23731-1|AAA70033.1| 414|Homo sapiens TAR DNA-binding protein-4... 33 0.72
EF434182-1|ABO32291.1| 414|Homo sapiens TDP43 splice variant 1 ... 33 0.72
EF434181-1|ABO32290.1| 416|Homo sapiens TDP43 protein. 33 0.72
CR533534-1|CAG38565.1| 414|Homo sapiens TARDBP protein. 33 0.72
BC095435-1|AAH95435.1| 414|Homo sapiens TAR DNA binding protein... 33 0.72
BC071657-1|AAH71657.1| 414|Homo sapiens TARDBP protein protein. 33 0.72
AL109811-2|CAI22099.1| 295|Homo sapiens TAR DNA binding protein... 33 0.72
AL109811-1|CAI22098.1| 414|Homo sapiens TAR DNA binding protein... 33 0.72
AK222754-1|BAD96474.1| 414|Homo sapiens TAR DNA binding protein... 33 0.72
Z95327-4|CAI42681.1| 225|Homo sapiens cleavage stimulation fact... 33 0.95
BC013889-1|AAH13889.1| 759|Homo sapiens RNA binding motif prote... 33 0.95
AK001239-1|BAA91575.1| 759|Homo sapiens protein ( Homo sapiens ... 33 0.95
U68063-1|AAB08701.1| 288|Homo sapiens transformer-2 beta protein. 33 1.3
U61267-1|AAC28242.1| 288|Homo sapiens htra2-beta protein. 33 1.3
BC005898-1|AAH05898.1| 288|Homo sapiens splicing factor, argini... 33 1.3
BC000451-1|AAH00451.1| 288|Homo sapiens splicing factor, argini... 33 1.3
BC000160-1|AAH00160.1| 288|Homo sapiens splicing factor, argini... 33 1.3
AK098191-1|BAC05256.1| 252|Homo sapiens protein ( Homo sapiens ... 33 1.3
AF057159-1|AAD19277.1| 288|Homo sapiens transformer-2-beta isof... 33 1.3
AB209208-1|BAD92445.1| 278|Homo sapiens splicing factor, argini... 33 1.3
Z95327-3|CAI42680.1| 577|Homo sapiens cleavage stimulation fact... 32 1.7
Z83819-6|CAB06072.2| 577|Homo sapiens cleavage stimulation fact... 32 1.7
X03910-1|CAA27544.1| 225|Homo sapiens protein ( Human mRNA for ... 32 1.7
U51586-1|AAB41656.1| 541|Homo sapiens siah binding protein 1 pr... 32 1.7
M85085-1|AAA35724.1| 577|Homo sapiens cleavage stimulation fact... 32 1.7
CR457143-1|CAG33424.1| 559|Homo sapiens SIAHBP1 protein. 32 1.7
BT009778-1|AAP88780.1| 577|Homo sapiens cleavage stimulation fa... 32 1.7
BC033135-1|AAH33135.1| 559|Homo sapiens Similar to cleavage sti... 32 1.7
BC017712-1|AAH17712.1| 577|Homo sapiens cleavage stimulation fa... 32 1.7
BC011979-1|AAH11979.1| 516|Homo sapiens SIAHBP1 protein protein. 32 1.7
BC011265-1|AAH11265.1| 516|Homo sapiens SIAHBP1 protein protein. 32 1.7
BC009734-1|AAH09734.1| 499|Homo sapiens SIAHBP1 protein protein. 32 1.7
BC008875-1|AAH08875.1| 542|Homo sapiens fuse-binding protein-in... 32 1.7
AF217197-1|AAF27522.2| 542|Homo sapiens FBP-interacting repress... 32 1.7
AF190744-1|AAF05605.1| 556|Homo sapiens poly-U binding splicing... 32 1.7
AF114818-1|AAF23589.1| 559|Homo sapiens Ro ribonucleoprotein-bi... 32 1.7
U23803-1|AAA65094.1| 305|Homo sapiens heterogeneous ribonucleop... 32 2.2
CR456986-1|CAG33267.1| 305|Homo sapiens HNRPA0 protein. 32 2.2
BC030249-1|AAH30249.1| 305|Homo sapiens heterogeneous nuclear r... 32 2.2
BC028976-1|AAH28976.1| 305|Homo sapiens heterogeneous nuclear r... 32 2.2
BC019271-1|AAH19271.1| 305|Homo sapiens heterogeneous nuclear r... 32 2.2
BC018949-1|AAH18949.1| 305|Homo sapiens heterogeneous nuclear r... 32 2.2
BC012980-1|AAH12980.1| 305|Homo sapiens heterogeneous nuclear r... 32 2.2
BC012457-1|AAH12457.1| 227|Homo sapiens Similar to nucleolar pr... 32 2.2
BC011972-1|AAH11972.1| 305|Homo sapiens heterogeneous nuclear r... 32 2.2
BC009284-1|AAH09284.1| 305|Homo sapiens heterogeneous nuclear r... 32 2.2
BC007271-1|AAH07271.1| 305|Homo sapiens heterogeneous nuclear r... 32 2.2
BC001008-1|AAH01008.1| 305|Homo sapiens heterogeneous nuclear r... 32 2.2
AK222716-1|BAD96436.1| 759|Homo sapiens RNA binding motif prote... 32 2.2
AF057159-3|AAD19278.1| 188|Homo sapiens transformer-2-beta isof... 32 2.2
AY236872-1|AAP75556.1| 419|Homo sapiens RNA binding motif singl... 31 2.9
U76713-1|AAC50956.1| 331|Homo sapiens ABBP-1 protein. 31 3.8
M65028-1|AAA36575.1| 284|Homo sapiens hnRNP type A/B protein pr... 31 3.8
U28686-1|AAB17212.1| 157|Homo sapiens RNPL protein. 31 5.1
BC006825-1|AAH06825.1| 157|Homo sapiens RNA binding motif (RNP1... 31 5.1
U03469-1|AAC52063.1| 477|Homo sapiens glucagon receptor protein. 30 6.7
L20316-1|AAA53628.1| 477|Homo sapiens glucagon receptor protein. 30 6.7
BC112041-1|AAI12042.1| 477|Homo sapiens glucagon receptor protein. 30 6.7
BC104854-1|AAI04855.1| 477|Homo sapiens glucagon receptor protein. 30 6.7
BC036708-1|AAH36708.1| 332|Homo sapiens heterogeneous nuclear r... 30 8.9
BC009359-1|AAH09359.1| 285|Homo sapiens heterogeneous nuclear r... 30 8.9
BC004561-1|AAH04561.1| 285|Homo sapiens heterogeneous nuclear r... 30 8.9
BC002625-1|AAH02625.1| 285|Homo sapiens heterogeneous nuclear r... 30 8.9
BC001616-1|AAH01616.1| 285|Homo sapiens heterogeneous nuclear r... 30 8.9
AK223425-1|BAD97145.1| 332|Homo sapiens heterogeneous nuclear r... 30 8.9
AK097657-1|BAC05134.1| 332|Homo sapiens protein ( Homo sapiens ... 30 8.9
>U96074-1|AAC78728.1| 320|Homo sapiens translation initiation
factor eIF3 p44 subunit protein.
Length = 320
Score = 170 bits (414), Expect = 3e-42
Identities = 96/232 (41%), Positives = 126/232 (54%), Gaps = 18/232 (7%)
Frame = -2
Query: 687 EVVENGXKIVTEYKYDNDNKKVKIVRTYKIEKRVVSKSIAKRKTWSKFGDSASDKPGPNP 508
EV+ K VTEYK D D KK KIVRT++IE R SK++A+RK W KFG+S D PGPN
Sbjct: 58 EVINGNIKTVTEYKIDEDGKKFKIVRTFRIETRKASKAVARRKNWKKFGNSEFDPPGPNV 117
Query: 507 ATTNVAEDVFMQFITSKEESQRPDDGELDGLKPPSSNVIFKCRTCQGDHLTLYCPFKHT- 331
ATT V++DV M FITSKE+ + E D + I CR C+GDH T CP+K T
Sbjct: 118 ATTTVSDDVSMTFITSKEDLNCQE--EEDPMNKLKGQKIVSCRICKGDHWTTRCPYKDTL 175
Query: 330 ---------QIXXXXXX-----XXXXXXXXXXXASNKYIPPS---SAGRIPGRDQPPVRR 202
Q+ + KY+PPS A R QP R
Sbjct: 176 GPMQKELAEQLGLSTGEKEKLPGELEPVQATQNKTGKYVPPSLRDGASRRGESMQPNRRA 235
Query: 201 EDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHF 46
+D IR++NLS E D+ +L + FG + ++YLAK+K+TG KGFA++ F
Sbjct: 236 DDNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQSKGFAFISF 287
>CR457134-1|CAG33415.1| 320|Homo sapiens EIF3S4 protein.
Length = 320
Score = 170 bits (414), Expect = 3e-42
Identities = 96/232 (41%), Positives = 126/232 (54%), Gaps = 18/232 (7%)
Frame = -2
Query: 687 EVVENGXKIVTEYKYDNDNKKVKIVRTYKIEKRVVSKSIAKRKTWSKFGDSASDKPGPNP 508
EV+ K VTEYK D D KK KIVRT++IE R SK++A+RK W KFG+S D PGPN
Sbjct: 58 EVINGNIKTVTEYKIDEDGKKFKIVRTFRIETRKASKAVARRKNWKKFGNSEFDPPGPNV 117
Query: 507 ATTNVAEDVFMQFITSKEESQRPDDGELDGLKPPSSNVIFKCRTCQGDHLTLYCPFKHT- 331
ATT V++DV M FITSKE+ + E D + I CR C+GDH T CP+K T
Sbjct: 118 ATTTVSDDVSMTFITSKEDLNCQE--EEDPMNKLKGQKIVSCRICKGDHWTTRCPYKDTL 175
Query: 330 ---------QIXXXXXX-----XXXXXXXXXXXASNKYIPPS---SAGRIPGRDQPPVRR 202
Q+ + KY+PPS A R QP R
Sbjct: 176 GPMQKELAEQLGLSTGEKEKLPGELEPVQATQNKTGKYVPPSLRDGASRRGESMQPNRRA 235
Query: 201 EDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHF 46
+D IR++NLS E D+ +L + FG + ++YLAK+K+TG KGFA++ F
Sbjct: 236 DDNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQSKGFAFISF 287
>BT006889-1|AAP35535.1| 320|Homo sapiens eukaryotic translation
initiation factor 3, subunit 4 delta, 44kDa protein.
Length = 320
Score = 170 bits (414), Expect = 3e-42
Identities = 96/232 (41%), Positives = 126/232 (54%), Gaps = 18/232 (7%)
Frame = -2
Query: 687 EVVENGXKIVTEYKYDNDNKKVKIVRTYKIEKRVVSKSIAKRKTWSKFGDSASDKPGPNP 508
EV+ K VTEYK D D KK KIVRT++IE R SK++A+RK W KFG+S D PGPN
Sbjct: 58 EVINGNIKTVTEYKIDEDGKKFKIVRTFRIETRKASKAVARRKNWKKFGNSEFDPPGPNV 117
Query: 507 ATTNVAEDVFMQFITSKEESQRPDDGELDGLKPPSSNVIFKCRTCQGDHLTLYCPFKHT- 331
ATT V++DV M FITSKE+ + E D + I CR C+GDH T CP+K T
Sbjct: 118 ATTTVSDDVSMTFITSKEDLNCQE--EEDPMNKLKGQKIVSCRICKGDHWTTRCPYKDTL 175
Query: 330 ---------QIXXXXXX-----XXXXXXXXXXXASNKYIPPS---SAGRIPGRDQPPVRR 202
Q+ + KY+PPS A R QP R
Sbjct: 176 GPMQKELAEQLGLSTGEKEKLPGELEPVQATQNKTGKYVPPSLRDGASRRGESMQPNRRA 235
Query: 201 EDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHF 46
+D IR++NLS E D+ +L + FG + ++YLAK+K+TG KGFA++ F
Sbjct: 236 DDNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQSKGFAFISF 287
>BC008469-1|AAH08469.1| 320|Homo sapiens eukaryotic translation
initiation factor 3, subunit 4 delta, 44kDa protein.
Length = 320
Score = 170 bits (414), Expect = 3e-42
Identities = 96/232 (41%), Positives = 126/232 (54%), Gaps = 18/232 (7%)
Frame = -2
Query: 687 EVVENGXKIVTEYKYDNDNKKVKIVRTYKIEKRVVSKSIAKRKTWSKFGDSASDKPGPNP 508
EV+ K VTEYK D D KK KIVRT++IE R SK++A+RK W KFG+S D PGPN
Sbjct: 58 EVINGNIKTVTEYKIDEDGKKFKIVRTFRIETRKASKAVARRKNWKKFGNSEFDPPGPNV 117
Query: 507 ATTNVAEDVFMQFITSKEESQRPDDGELDGLKPPSSNVIFKCRTCQGDHLTLYCPFKHT- 331
ATT V++DV M FITSKE+ + E D + I CR C+GDH T CP+K T
Sbjct: 118 ATTTVSDDVSMTFITSKEDLNCQE--EEDPMNKLKGQKIVSCRICKGDHWTTRCPYKDTL 175
Query: 330 ---------QIXXXXXX-----XXXXXXXXXXXASNKYIPPS---SAGRIPGRDQPPVRR 202
Q+ + KY+PPS A R QP R
Sbjct: 176 GPMQKELAEQLGLSTGEKEKLPGELEPVQATQNKTGKYVPPSLRDGASRRGESMQPNRRA 235
Query: 201 EDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHF 46
+D IR++NLS E D+ +L + FG + ++YLAK+K+TG KGFA++ F
Sbjct: 236 DDNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQSKGFAFISF 287
>BC000733-1|AAH00733.1| 320|Homo sapiens eukaryotic translation
initiation factor 3, subunit 4 delta, 44kDa protein.
Length = 320
Score = 170 bits (414), Expect = 3e-42
Identities = 96/232 (41%), Positives = 126/232 (54%), Gaps = 18/232 (7%)
Frame = -2
Query: 687 EVVENGXKIVTEYKYDNDNKKVKIVRTYKIEKRVVSKSIAKRKTWSKFGDSASDKPGPNP 508
EV+ K VTEYK D D KK KIVRT++IE R SK++A+RK W KFG+S D PGPN
Sbjct: 58 EVINGNIKTVTEYKIDEDGKKFKIVRTFRIETRKASKAVARRKNWKKFGNSEFDPPGPNV 117
Query: 507 ATTNVAEDVFMQFITSKEESQRPDDGELDGLKPPSSNVIFKCRTCQGDHLTLYCPFKHT- 331
ATT V++DV M FITSKE+ + E D + I CR C+GDH T CP+K T
Sbjct: 118 ATTTVSDDVSMTFITSKEDLNCQE--EEDPMNKLKGQKIVSCRICKGDHWTTRCPYKDTL 175
Query: 330 ---------QIXXXXXX-----XXXXXXXXXXXASNKYIPPS---SAGRIPGRDQPPVRR 202
Q+ + KY+PPS A R QP R
Sbjct: 176 GPMQKELAEQLGLSTGEKEKLPGELEPVQATQNKTGKYVPPSLRDGASRRGESMQPNRRA 235
Query: 201 EDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHF 46
+D IR++NLS E D+ +L + FG + ++YLAK+K+TG KGFA++ F
Sbjct: 236 DDNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQSKGFAFISF 287
>AF094850-1|AAG15419.1| 320|Homo sapiens eukaryotic translation
initiation factor 3 subunit p42/p44 protein.
Length = 320
Score = 170 bits (414), Expect = 3e-42
Identities = 96/232 (41%), Positives = 126/232 (54%), Gaps = 18/232 (7%)
Frame = -2
Query: 687 EVVENGXKIVTEYKYDNDNKKVKIVRTYKIEKRVVSKSIAKRKTWSKFGDSASDKPGPNP 508
EV+ K VTEYK D D KK KIVRT++IE R SK++A+RK W KFG+S D PGPN
Sbjct: 58 EVINGNIKTVTEYKIDEDGKKFKIVRTFRIETRKASKAVARRKNWKKFGNSEFDPPGPNV 117
Query: 507 ATTNVAEDVFMQFITSKEESQRPDDGELDGLKPPSSNVIFKCRTCQGDHLTLYCPFKHT- 331
ATT V++DV M FITSKE+ + E D + I CR C+GDH T CP+K T
Sbjct: 118 ATTTVSDDVSMTFITSKEDLNCQE--EEDPMNKLKGQKIVSCRICKGDHWTTRCPYKDTL 175
Query: 330 ---------QIXXXXXX-----XXXXXXXXXXXASNKYIPPS---SAGRIPGRDQPPVRR 202
Q+ + KY+PPS A R QP R
Sbjct: 176 GPMQKELAEQLGLSTGEKEKLPGELEPVQATQNKTGKYVPPSLRDGASRRGESMQPNRRA 235
Query: 201 EDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHF 46
+D IR++NLS E D+ +L + FG + ++YLAK+K+TG KGFA++ F
Sbjct: 236 DDNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQSKGFAFISF 287
>AF092453-1|AAG15396.1| 320|Homo sapiens eukaryotic translation
initiation factor 3 subunit p42/p44 protein.
Length = 320
Score = 170 bits (414), Expect = 3e-42
Identities = 96/232 (41%), Positives = 126/232 (54%), Gaps = 18/232 (7%)
Frame = -2
Query: 687 EVVENGXKIVTEYKYDNDNKKVKIVRTYKIEKRVVSKSIAKRKTWSKFGDSASDKPGPNP 508
EV+ K VTEYK D D KK KIVRT++IE R SK++A+RK W KFG+S D PGPN
Sbjct: 58 EVINGNIKTVTEYKIDEDGKKFKIVRTFRIETRKASKAVARRKNWKKFGNSEFDPPGPNV 117
Query: 507 ATTNVAEDVFMQFITSKEESQRPDDGELDGLKPPSSNVIFKCRTCQGDHLTLYCPFKHT- 331
ATT V++DV M FITSKE+ + E D + I CR C+GDH T CP+K T
Sbjct: 118 ATTTVSDDVSMTFITSKEDLNCQE--EEDPMNKLKGQKIVSCRICKGDHWTTRCPYKDTL 175
Query: 330 ---------QIXXXXXX-----XXXXXXXXXXXASNKYIPPS---SAGRIPGRDQPPVRR 202
Q+ + KY+PPS A R QP R
Sbjct: 176 GPMQKELAEQLGLSTGEKEKLPGELEPVQATQNKTGKYVPPSLRDGASRRGESMQPNRRA 235
Query: 201 EDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHF 46
+D IR++NLS E D+ +L + FG + ++YLAK+K+TG KGFA++ F
Sbjct: 236 DDNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQSKGFAFISF 287
>AF020833-1|AAB71866.1| 320|Homo sapiens eukaryotic translation
initiation factor 3 subunit protein.
Length = 320
Score = 170 bits (414), Expect = 3e-42
Identities = 96/232 (41%), Positives = 126/232 (54%), Gaps = 18/232 (7%)
Frame = -2
Query: 687 EVVENGXKIVTEYKYDNDNKKVKIVRTYKIEKRVVSKSIAKRKTWSKFGDSASDKPGPNP 508
EV+ K VTEYK D D KK KIVRT++IE R SK++A+RK W KFG+S D PGPN
Sbjct: 58 EVINGNIKTVTEYKIDEDGKKFKIVRTFRIETRKASKAVARRKNWKKFGNSEFDPPGPNV 117
Query: 507 ATTNVAEDVFMQFITSKEESQRPDDGELDGLKPPSSNVIFKCRTCQGDHLTLYCPFKHT- 331
ATT V++DV M FITSKE+ + E D + I CR C+GDH T CP+K T
Sbjct: 118 ATTTVSDDVSMTFITSKEDLNCQE--EEDPMNKLKGQKIVSCRICKGDHWTTRCPYKDTL 175
Query: 330 ---------QIXXXXXX-----XXXXXXXXXXXASNKYIPPS---SAGRIPGRDQPPVRR 202
Q+ + KY+PPS A R QP R
Sbjct: 176 GPMQKELAEQLGLSTGEKEKLPGELEPVQATQNKTGKYVPPSLRDGASRRGESMQPNRRA 235
Query: 201 EDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHF 46
+D IR++NLS E D+ +L + FG + ++YLAK+K+TG KGFA++ F
Sbjct: 236 DDNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQSKGFAFISF 287
>BC010939-1|AAH10939.1| 306|Homo sapiens poly(A) binding protein,
nuclear 1 protein.
Length = 306
Score = 38.7 bits (86), Expect = 0.019
Identities = 20/70 (28%), Positives = 37/70 (52%)
Frame = -2
Query: 255 PPSSAGRIPGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTG 76
PP +AG + + + D +I + N+ A +++ G G V+++ + +K +G
Sbjct: 152 PPGNAGPVIMSIEEKMEA-DARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSG 210
Query: 75 HCKGFAYVHF 46
H KGFAY+ F
Sbjct: 211 HPKGFAYIEF 220
>AF026029-1|AAC39596.1| 306|Homo sapiens poly(A) binding protein II
protein.
Length = 306
Score = 38.7 bits (86), Expect = 0.019
Identities = 20/70 (28%), Positives = 37/70 (52%)
Frame = -2
Query: 255 PPSSAGRIPGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTG 76
PP +AG + + + D +I + N+ A +++ G G V+++ + +K +G
Sbjct: 152 PPGNAGPVIMSIEEKMEA-DARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSG 210
Query: 75 HCKGFAYVHF 46
H KGFAY+ F
Sbjct: 211 HPKGFAYIEF 220
>U53209-1|AAC50658.1| 282|Homo sapiens transformer-2 alpha protein.
Length = 282
Score = 37.9 bits (84), Expect = 0.034
Identities = 20/76 (26%), Positives = 39/76 (51%)
Frame = -2
Query: 270 SNKYIPPSSAGRIPGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAK 91
S + P S+ R G P + T + + LS + E D+ ++ +GP+ + +
Sbjct: 96 SRSHSPMSNRRRHTGSRANP---DPNTCLGVFGLSLYTTERDLREVFSRYGPLSGVNVVY 152
Query: 90 EKSTGHCKGFAYVHFK 43
++ TG +GFA+V+F+
Sbjct: 153 DQRTGRSRGFAFVYFE 168
>BC017094-1|AAH17094.1| 282|Homo sapiens transformer-2 alpha
protein.
Length = 282
Score = 37.9 bits (84), Expect = 0.034
Identities = 20/76 (26%), Positives = 39/76 (51%)
Frame = -2
Query: 270 SNKYIPPSSAGRIPGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAK 91
S + P S+ R G P + T + + LS + E D+ ++ +GP+ + +
Sbjct: 96 SRSHSPMSNRRRHTGSRANP---DPNTCLGVFGLSLYTTERDLREVFSRYGPLSGVNVVY 152
Query: 90 EKSTGHCKGFAYVHFK 43
++ TG +GFA+V+F+
Sbjct: 153 DQRTGRSRGFAFVYFE 168
>AC023105-1|AAQ96870.1| 282|Homo sapiens unknown protein.
Length = 282
Score = 37.9 bits (84), Expect = 0.034
Identities = 20/76 (26%), Positives = 39/76 (51%)
Frame = -2
Query: 270 SNKYIPPSSAGRIPGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAK 91
S + P S+ R G P + T + + LS + E D+ ++ +GP+ + +
Sbjct: 96 SRSHSPMSNRRRHTGSRANP---DPNTCLGVFGLSLYTTERDLREVFSRYGPLSGVNVVY 152
Query: 90 EKSTGHCKGFAYVHFK 43
++ TG +GFA+V+F+
Sbjct: 153 DQRTGRSRGFAFVYFE 168
>AB097048-1|BAC77401.1| 282|Homo sapiens putative MAPK activating
protein protein.
Length = 282
Score = 37.9 bits (84), Expect = 0.034
Identities = 20/76 (26%), Positives = 39/76 (51%)
Frame = -2
Query: 270 SNKYIPPSSAGRIPGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAK 91
S + P S+ R G P + T + + LS + E D+ ++ +GP+ + +
Sbjct: 96 SRSHSPMSNRRRHTGSRANP---DPNTCLGVFGLSLYTTERDLREVFSRYGPLSGVNVVY 152
Query: 90 EKSTGHCKGFAYVHFK 43
++ TG +GFA+V+F+
Sbjct: 153 DQRTGRSRGFAFVYFE 168
>BC024238-1|AAH24238.1| 293|Homo sapiens MKI67 (FHA domain)
interacting nucleolar phosphoprotein protein.
Length = 293
Score = 36.7 bits (81), Expect = 0.077
Identities = 18/59 (30%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Frame = -2
Query: 207 RREDVT--AIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKXQ 37
++E +T + + +L N E I FG V + L++ K TG+ KG+A+V F+ +
Sbjct: 38 KQEQLTPGVVYVRHLPNLLDETQIFSYFSQFGTVTRFRLSRSKRTGNSKGYAFVEFESE 96
>BC022990-1|AAH22990.1| 293|Homo sapiens MKI67 (FHA domain)
interacting nucleolar phosphoprotein protein.
Length = 293
Score = 36.7 bits (81), Expect = 0.077
Identities = 18/59 (30%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Frame = -2
Query: 207 RREDVT--AIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKXQ 37
++E +T + + +L N E I FG V + L++ K TG+ KG+A+V F+ +
Sbjct: 38 KQEQLTPGVVYVRHLPNLLDETQIFSYFSQFGTVTRFRLSRSKRTGNSKGYAFVEFESE 96
>AC018737-1|AAY14830.1| 293|Homo sapiens unknown protein.
Length = 293
Score = 36.7 bits (81), Expect = 0.077
Identities = 18/59 (30%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Frame = -2
Query: 207 RREDVT--AIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKXQ 37
++E +T + + +L N E I FG V + L++ K TG+ KG+A+V F+ +
Sbjct: 38 KQEQLTPGVVYVRHLPNLLDETQIFSYFSQFGTVTRFRLSRSKRTGNSKGYAFVEFESE 96
>AB044971-1|BAB41210.1| 293|Homo sapiens nucleolar phosphoprotein
Nopp34 protein.
Length = 293
Score = 36.7 bits (81), Expect = 0.077
Identities = 18/59 (30%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Frame = -2
Query: 207 RREDVT--AIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKXQ 37
++E +T + + +L N E I FG V + L++ K TG+ KG+A+V F+ +
Sbjct: 38 KQEQLTPGVVYVRHLPNLLDETQIFSYFSQFGTVTRFRLSRSKRTGNSKGYAFVEFESE 96
>D26068-1|BAA05063.1| 230|Homo sapiens KIAA0038 protein.
Length = 230
Score = 36.3 bits (80), Expect = 0.10
Identities = 22/67 (32%), Positives = 30/67 (44%)
Frame = -2
Query: 246 SAGRIPGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCK 67
SAG R Q + E + NL V+ DID + K + + L ++K T K
Sbjct: 26 SAGGHGSRSQKELPTEPPYTAYVGNLPFNTVQGDIDAIFKDLS-IRSVRLVRDKDTDKFK 84
Query: 66 GFAYVHF 46
GF YV F
Sbjct: 85 GFCYVEF 91
>BC066928-1|AAH66928.1| 228|Homo sapiens eukaryotic translation
initiation factor 4H protein.
Length = 228
Score = 36.3 bits (80), Expect = 0.10
Identities = 22/67 (32%), Positives = 30/67 (44%)
Frame = -2
Query: 246 SAGRIPGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCK 67
SAG R Q + E + NL V+ DID + K + + L ++K T K
Sbjct: 24 SAGGHGSRSQKELPTEPPYTAYVGNLPFNTVQGDIDAIFKDLS-IRSVRLVRDKDTDKFK 82
Query: 66 GFAYVHF 46
GF YV F
Sbjct: 83 GFCYVEF 89
>BC021214-1|AAH21214.1| 228|Homo sapiens eukaryotic translation
initiation factor 4H protein.
Length = 228
Score = 36.3 bits (80), Expect = 0.10
Identities = 22/67 (32%), Positives = 30/67 (44%)
Frame = -2
Query: 246 SAGRIPGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCK 67
SAG R Q + E + NL V+ DID + K + + L ++K T K
Sbjct: 24 SAGGHGSRSQKELPTEPPYTAYVGNLPFNTVQGDIDAIFKDLS-IRSVRLVRDKDTDKFK 82
Query: 66 GFAYVHF 46
GF YV F
Sbjct: 83 GFCYVEF 89
>BC010021-1|AAH10021.1| 228|Homo sapiens eukaryotic translation
initiation factor 4H protein.
Length = 228
Score = 36.3 bits (80), Expect = 0.10
Identities = 22/67 (32%), Positives = 30/67 (44%)
Frame = -2
Query: 246 SAGRIPGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCK 67
SAG R Q + E + NL V+ DID + K + + L ++K T K
Sbjct: 24 SAGGHGSRSQKELPTEPPYTAYVGNLPFNTVQGDIDAIFKDLS-IRSVRLVRDKDTDKFK 82
Query: 66 GFAYVHF 46
GF YV F
Sbjct: 83 GFCYVEF 89
>AF045555-2|AAF75557.1| 228|Homo sapiens wbscr1 protein.
Length = 228
Score = 36.3 bits (80), Expect = 0.10
Identities = 22/67 (32%), Positives = 30/67 (44%)
Frame = -2
Query: 246 SAGRIPGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCK 67
SAG R Q + E + NL V+ DID + K + + L ++K T K
Sbjct: 24 SAGGHGSRSQKELPTEPPYTAYVGNLPFNTVQGDIDAIFKDLS-IRSVRLVRDKDTDKFK 82
Query: 66 GFAYVHF 46
GF YV F
Sbjct: 83 GFCYVEF 89
>AF045555-1|AAC04859.2| 248|Homo sapiens wbscr1 alternative spliced
product protein.
Length = 248
Score = 36.3 bits (80), Expect = 0.10
Identities = 22/67 (32%), Positives = 30/67 (44%)
Frame = -2
Query: 246 SAGRIPGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCK 67
SAG R Q + E + NL V+ DID + K + + L ++K T K
Sbjct: 24 SAGGHGSRSQKELPTEPPYTAYVGNLPFNTVQGDIDAIFKDLS-IRSVRLVRDKDTDKFK 82
Query: 66 GFAYVHF 46
GF YV F
Sbjct: 83 GFCYVEF 89
>AC005057-2|AAS07440.1| 136|Homo sapiens unknown protein.
Length = 136
Score = 36.3 bits (80), Expect = 0.10
Identities = 22/67 (32%), Positives = 30/67 (44%)
Frame = -2
Query: 246 SAGRIPGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCK 67
SAG R Q + E + NL V+ DID + K + + L ++K T K
Sbjct: 24 SAGGHGSRSQKELPTEPPYTAYVGNLPFNTVQGDIDAIFKDLS-IRSVRLVRDKDTDKFK 82
Query: 66 GFAYVHF 46
GF YV F
Sbjct: 83 GFCYVEF 89
>AC005057-1|AAS07439.1| 156|Homo sapiens unknown protein.
Length = 156
Score = 36.3 bits (80), Expect = 0.10
Identities = 22/67 (32%), Positives = 30/67 (44%)
Frame = -2
Query: 246 SAGRIPGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCK 67
SAG R Q + E + NL V+ DID + K + + L ++K T K
Sbjct: 24 SAGGHGSRSQKELPTEPPYTAYVGNLPFNTVQGDIDAIFKDLS-IRSVRLVRDKDTDKFK 82
Query: 66 GFAYVHF 46
GF YV F
Sbjct: 83 GFCYVEF 89
>X64044-1|CAA45409.1| 475|Homo sapiens splicing factor U2AF
protein.
Length = 475
Score = 35.5 bits (78), Expect = 0.18
Identities = 14/45 (31%), Positives = 25/45 (55%)
Frame = -2
Query: 180 ISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHF 46
I L N+ + + +L+ FGP+ L K+ +TG KG+A+ +
Sbjct: 263 IGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKGYAFCEY 307
>BC030574-1|AAH30574.1| 471|Homo sapiens U2 small nuclear RNA
auxiliary factor 2 protein.
Length = 471
Score = 35.5 bits (78), Expect = 0.18
Identities = 14/45 (31%), Positives = 25/45 (55%)
Frame = -2
Query: 180 ISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHF 46
I L N+ + + +L+ FGP+ L K+ +TG KG+A+ +
Sbjct: 263 IGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKGYAFCEY 307
>BC008740-1|AAH08740.1| 471|Homo sapiens U2 small nuclear RNA
auxiliary factor 2 protein.
Length = 471
Score = 35.5 bits (78), Expect = 0.18
Identities = 14/45 (31%), Positives = 25/45 (55%)
Frame = -2
Query: 180 ISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHF 46
I L N+ + + +L+ FGP+ L K+ +TG KG+A+ +
Sbjct: 263 IGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKGYAFCEY 307
>BC006137-1|AAH06137.1| 960|Homo sapiens RBM19 protein protein.
Length = 960
Score = 35.5 bits (78), Expect = 0.18
Identities = 18/65 (27%), Positives = 33/65 (50%)
Frame = -2
Query: 240 GRIPGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGF 61
GRI G ++ + + + NL + E D++ L +GP+ +L+ + T KGF
Sbjct: 386 GRILGENEEEEDLAESGRLFVRNLPYTSTEEDLEKLFSKYGPLSELHYPIDSLTKKPKGF 445
Query: 60 AYVHF 46
A++ F
Sbjct: 446 AFITF 450
>BC004289-1|AAH04289.1| 960|Homo sapiens RBM19 protein protein.
Length = 960
Score = 35.5 bits (78), Expect = 0.18
Identities = 18/65 (27%), Positives = 33/65 (50%)
Frame = -2
Query: 240 GRIPGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGF 61
GRI G ++ + + + NL + E D++ L +GP+ +L+ + T KGF
Sbjct: 386 GRILGENEEEEDLAESGRLFVRNLPYTSTEEDLEKLFSKYGPLSELHYPIDSLTKKPKGF 445
Query: 60 AYVHF 46
A++ F
Sbjct: 446 AFITF 450
>AB014582-1|BAA31657.2| 973|Homo sapiens KIAA0682 protein protein.
Length = 973
Score = 35.5 bits (78), Expect = 0.18
Identities = 18/65 (27%), Positives = 33/65 (50%)
Frame = -2
Query: 240 GRIPGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGF 61
GRI G ++ + + + NL + E D++ L +GP+ +L+ + T KGF
Sbjct: 399 GRILGENEEEEDLAESGRLFVRNLPYTSTEEDLEKLFSKYGPLSELHYPIDSLTKKPKGF 458
Query: 60 AYVHF 46
A++ F
Sbjct: 459 AFITF 463
>AB046799-1|BAB13405.1| 704|Homo sapiens KIAA1579 protein protein.
Length = 704
Score = 34.7 bits (76), Expect = 0.31
Identities = 12/45 (26%), Positives = 26/45 (57%)
Frame = -2
Query: 180 ISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHF 46
I+N+ + ++LV+ +G + + +L + TGH KG+ +V +
Sbjct: 172 ITNVPISFTSEEFEELVRAYGNIERCFLVYSEVTGHSKGYGFVEY 216
>U02019-1|AAC50056.1| 286|Homo sapiens p37 AUF1 protein.
Length = 286
Score = 34.3 bits (75), Expect = 0.41
Identities = 19/65 (29%), Positives = 29/65 (44%)
Frame = -2
Query: 231 PGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYV 52
P R + +E V I + LS E I + GFG V + L + T +GF ++
Sbjct: 148 PKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFI 207
Query: 51 HFKXQ 37
FK +
Sbjct: 208 TFKEE 212
>D55674-1|BAA09525.1| 355|Homo sapiens heterogeneous nuclear
ribonucleoprotein D (hnRNP D) protein.
Length = 355
Score = 34.3 bits (75), Expect = 0.41
Identities = 19/65 (29%), Positives = 29/65 (44%)
Frame = -2
Query: 231 PGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYV 52
P R + +E V I + LS E I + GFG V + L + T +GF ++
Sbjct: 169 PKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFI 228
Query: 51 HFKXQ 37
FK +
Sbjct: 229 TFKEE 233
>D55673-1|BAA09524.1| 215|Homo sapiens heterogeneous nuclear
ribonucleoprotein D (hnRNP D) protein.
Length = 215
Score = 34.3 bits (75), Expect = 0.41
Identities = 19/65 (29%), Positives = 29/65 (44%)
Frame = -2
Query: 231 PGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYV 52
P R + +E V I + LS E I + GFG V + L + T +GF ++
Sbjct: 78 PKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFI 137
Query: 51 HFKXQ 37
FK +
Sbjct: 138 TFKEE 142
>D55672-1|BAA09523.1| 306|Homo sapiens heterogeneous nuclear
ribonucleoprotein D (hnRNP D) protein.
Length = 306
Score = 34.3 bits (75), Expect = 0.41
Identities = 19/65 (29%), Positives = 29/65 (44%)
Frame = -2
Query: 231 PGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYV 52
P R + +E V I + LS E I + GFG V + L + T +GF ++
Sbjct: 169 PKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFI 228
Query: 51 HFKXQ 37
FK +
Sbjct: 229 TFKEE 233
>D55671-1|BAA09522.1| 267|Homo sapiens heterogeneous nuclear
ribonucleoprotein D (hnRNP D) protein.
Length = 267
Score = 34.3 bits (75), Expect = 0.41
Identities = 19/65 (29%), Positives = 29/65 (44%)
Frame = -2
Query: 231 PGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYV 52
P R + +E V I + LS E I + GFG V + L + T +GF ++
Sbjct: 81 PKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFI 140
Query: 51 HFKXQ 37
FK +
Sbjct: 141 TFKEE 145
>BC026015-1|AAH26015.1| 306|Homo sapiens heterogeneous nuclear
ribonucleoprotein D (AU-rich element RNA binding protein
protein.
Length = 306
Score = 34.3 bits (75), Expect = 0.41
Identities = 19/65 (29%), Positives = 29/65 (44%)
Frame = -2
Query: 231 PGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYV 52
P R + +E V I + LS E I + GFG V + L + T +GF ++
Sbjct: 169 PKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFI 228
Query: 51 HFKXQ 37
FK +
Sbjct: 229 TFKEE 233
>BC023977-1|AAH23977.1| 306|Homo sapiens heterogeneous nuclear
ribonucleoprotein D (AU-rich element RNA binding protein
protein.
Length = 306
Score = 34.3 bits (75), Expect = 0.41
Identities = 19/65 (29%), Positives = 29/65 (44%)
Frame = -2
Query: 231 PGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYV 52
P R + +E V I + LS E I + GFG V + L + T +GF ++
Sbjct: 169 PKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFI 228
Query: 51 HFKXQ 37
FK +
Sbjct: 229 TFKEE 233
>BC002401-1|AAH02401.1| 355|Homo sapiens heterogeneous nuclear
ribonucleoprotein D (AU-rich element RNA binding protein
protein.
Length = 355
Score = 34.3 bits (75), Expect = 0.41
Identities = 19/65 (29%), Positives = 29/65 (44%)
Frame = -2
Query: 231 PGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYV 52
P R + +E V I + LS E I + GFG V + L + T +GF ++
Sbjct: 169 PKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFI 228
Query: 51 HFKXQ 37
FK +
Sbjct: 229 TFKEE 233
>AF039575-1|AAB96683.1| 298|Homo sapiens heterogeneous nuclear
ribonucleoprotein D0B protein.
Length = 298
Score = 34.3 bits (75), Expect = 0.41
Identities = 19/65 (29%), Positives = 29/65 (44%)
Frame = -2
Query: 231 PGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYV 52
P R + +E V I + LS E I + GFG V + L + T +GF ++
Sbjct: 161 PKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFI 220
Query: 51 HFKXQ 37
FK +
Sbjct: 221 TFKEE 225
>AF026126-3|AAC23476.1| 336|Homo sapiens heterogeneous nuclear
ribonucleoprotein D protein.
Length = 336
Score = 34.3 bits (75), Expect = 0.41
Identities = 19/65 (29%), Positives = 29/65 (44%)
Frame = -2
Query: 231 PGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYV 52
P R + +E V I + LS E I + GFG V + L + T +GF ++
Sbjct: 150 PKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFI 209
Query: 51 HFKXQ 37
FK +
Sbjct: 210 TFKEE 214
>AF026126-2|AAC23475.1| 306|Homo sapiens heterogeneous nuclear
ribonucleoprotein D protein.
Length = 306
Score = 34.3 bits (75), Expect = 0.41
Identities = 19/65 (29%), Positives = 29/65 (44%)
Frame = -2
Query: 231 PGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYV 52
P R + +E V I + LS E I + GFG V + L + T +GF ++
Sbjct: 169 PKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFI 228
Query: 51 HFKXQ 37
FK +
Sbjct: 229 TFKEE 233
>AF026126-1|AAC23474.1| 355|Homo sapiens heterogeneous nuclear
ribonucleoprotein D protein.
Length = 355
Score = 34.3 bits (75), Expect = 0.41
Identities = 19/65 (29%), Positives = 29/65 (44%)
Frame = -2
Query: 231 PGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYV 52
P R + +E V I + LS E I + GFG V + L + T +GF ++
Sbjct: 169 PKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFI 228
Query: 51 HFKXQ 37
FK +
Sbjct: 229 TFKEE 233
>AC124016-1|AAY40913.1| 355|Homo sapiens unknown protein.
Length = 355
Score = 34.3 bits (75), Expect = 0.41
Identities = 19/65 (29%), Positives = 29/65 (44%)
Frame = -2
Query: 231 PGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYV 52
P R + +E V I + LS E I + GFG V + L + T +GF ++
Sbjct: 169 PKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFI 228
Query: 51 HFKXQ 37
FK +
Sbjct: 229 TFKEE 233
>CR541823-1|CAG46622.1| 174|Homo sapiens RBM8A protein.
Length = 174
Score = 33.9 bits (74), Expect = 0.55
Identities = 16/61 (26%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Frame = -2
Query: 222 DQP-PVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHF 46
D+P P R + + ++ + A E DI D +G + ++L ++ TG+ KG+ V +
Sbjct: 62 DEPGPQRSVEGWILFVTGVHEEATEEDIHDKFAEYGEIKNIHLNLDRRTGYLKGYTLVEY 121
Query: 45 K 43
+
Sbjct: 122 E 122
>CR541805-1|CAG46604.1| 174|Homo sapiens RBM8A protein.
Length = 174
Score = 33.9 bits (74), Expect = 0.55
Identities = 16/61 (26%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Frame = -2
Query: 222 DQP-PVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHF 46
D+P P R + + ++ + A E DI D +G + ++L ++ TG+ KG+ V +
Sbjct: 62 DEPGPQRSVEGWILFVTGVHEEATEEDIHDKFAEYGEIKNIHLNLDRRTGYLKGYTLVEY 121
Query: 45 K 43
+
Sbjct: 122 E 122
>BC071577-1|AAH71577.1| 174|Homo sapiens RNA binding motif protein
8A protein.
Length = 174
Score = 33.9 bits (74), Expect = 0.55
Identities = 16/61 (26%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Frame = -2
Query: 222 DQP-PVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHF 46
D+P P R + + ++ + A E DI D +G + ++L ++ TG+ KG+ V +
Sbjct: 62 DEPGPQRSVEGWILFVTGVHEEATEEDIHDKFAEYGEIKNIHLNLDRRTGYLKGYTLVEY 121
Query: 45 K 43
+
Sbjct: 122 E 122
>BC017088-1|AAH17088.1| 174|Homo sapiens RNA binding motif protein
8A protein.
Length = 174
Score = 33.9 bits (74), Expect = 0.55
Identities = 16/61 (26%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Frame = -2
Query: 222 DQP-PVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHF 46
D+P P R + + ++ + A E DI D +G + ++L ++ TG+ KG+ V +
Sbjct: 62 DEPGPQRSVEGWILFVTGVHEEATEEDIHDKFAEYGEIKNIHLNLDRRTGYLKGYTLVEY 121
Query: 45 K 43
+
Sbjct: 122 E 122
>AF403012-1|AAL26999.1| 174|Homo sapiens ribonucleoprotein RBM8
protein.
Length = 174
Score = 33.9 bits (74), Expect = 0.55
Identities = 16/61 (26%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Frame = -2
Query: 222 DQP-PVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHF 46
D+P P R + + ++ + A E DI D +G + ++L ++ TG+ KG+ V +
Sbjct: 62 DEPGPQRSVEGWILFVTGVHEEATEEDIHDKFAEYGEIKNIHLNLDRRTGYLKGYTLVEY 121
Query: 45 K 43
+
Sbjct: 122 E 122
>AF299118-1|AAG27091.1| 174|Homo sapiens RNA-binding protein Y14
protein.
Length = 174
Score = 33.9 bits (74), Expect = 0.55
Identities = 16/61 (26%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Frame = -2
Query: 222 DQP-PVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHF 46
D+P P R + + ++ + A E DI D +G + ++L ++ TG+ KG+ V +
Sbjct: 62 DEPGPQRSVEGWILFVTGVHEEATEEDIHDKFAEYGEIKNIHLNLDRRTGYLKGYTLVEY 121
Query: 45 K 43
+
Sbjct: 122 E 122
>AF231512-1|AAG16782.1| 158|Homo sapiens RNA binding motif protein
8B protein.
Length = 158
Score = 33.9 bits (74), Expect = 0.55
Identities = 16/61 (26%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Frame = -2
Query: 222 DQP-PVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHF 46
D+P P R + + ++ + A E DI D +G + ++L ++ TG+ KG+ V +
Sbjct: 46 DEPGPQRSVEGWILFVTGVHEEATEEDIHDKFAEYGEIKNIHLNLDRRTGYLKGYTLVEY 105
Query: 45 K 43
+
Sbjct: 106 E 106
>AF231511-1|AAG16781.1| 173|Homo sapiens RNA binding motif protein
8A protein.
Length = 173
Score = 33.9 bits (74), Expect = 0.55
Identities = 16/61 (26%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Frame = -2
Query: 222 DQP-PVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHF 46
D+P P R + + ++ + A E DI D +G + ++L ++ TG+ KG+ V +
Sbjct: 61 DEPGPQRSVEGWILFVTGVHEEATEEDIHDKFAEYGEIKNIHLNLDRRTGYLKGYTLVEY 120
Query: 45 K 43
+
Sbjct: 121 E 121
>AF198620-1|AAF37551.1| 173|Homo sapiens RNA binding motif protein
8 protein.
Length = 173
Score = 33.9 bits (74), Expect = 0.55
Identities = 16/61 (26%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Frame = -2
Query: 222 DQP-PVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHF 46
D+P P R + + ++ + A E DI D +G + ++L ++ TG+ KG+ V +
Sbjct: 61 DEPGPQRSVEGWILFVTGVHEEATEEDIHDKFAEYGEIKNIHLNLDRRTGYLKGYTLVEY 120
Query: 45 K 43
+
Sbjct: 121 E 121
>AF182415-1|AAG14951.1| 158|Homo sapiens MDS014 protein.
Length = 158
Score = 33.9 bits (74), Expect = 0.55
Identities = 16/61 (26%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Frame = -2
Query: 222 DQP-PVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHF 46
D+P P R + + ++ + A E DI D +G + ++L ++ TG+ KG+ V +
Sbjct: 46 DEPGPQRSVEGWILFVTGVHEEATEEDIHDKFAEYGEIKNIHLNLDRRTGYLKGYTLVEY 105
Query: 45 K 43
+
Sbjct: 106 E 106
>AF127761-1|AAD21089.1| 174|Homo sapiens ribonucleoprotein RBM8
protein.
Length = 174
Score = 33.9 bits (74), Expect = 0.55
Identities = 16/61 (26%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Frame = -2
Query: 222 DQP-PVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHF 46
D+P P R + + ++ + A E DI D +G + ++L ++ TG+ KG+ V +
Sbjct: 62 DEPGPQRSVEGWILFVTGVHEEATEEDIHDKFAEYGEIKNIHLNLDRRTGYLKGYTLVEY 121
Query: 45 K 43
+
Sbjct: 122 E 122
>U23731-1|AAA70033.1| 414|Homo sapiens TAR DNA-binding protein-43
protein.
Length = 414
Score = 33.5 bits (73), Expect = 0.72
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = -2
Query: 153 EADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHF 46
E D+ + FG V + + K+ TGH KGF +V F
Sbjct: 117 EQDLKEYFSTFGEVLMVQVKKDLKTGHSKGFGFVRF 152
>EF434182-1|ABO32291.1| 414|Homo sapiens TDP43 splice variant 1
protein.
Length = 414
Score = 33.5 bits (73), Expect = 0.72
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = -2
Query: 153 EADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHF 46
E D+ + FG V + + K+ TGH KGF +V F
Sbjct: 117 EQDLKEYFSTFGEVLMVQVKKDLKTGHSKGFGFVRF 152
>EF434181-1|ABO32290.1| 416|Homo sapiens TDP43 protein.
Length = 416
Score = 33.5 bits (73), Expect = 0.72
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = -2
Query: 153 EADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHF 46
E D+ + FG V + + K+ TGH KGF +V F
Sbjct: 117 EQDLKEYFSTFGEVLMVQVKKDLKTGHSKGFGFVRF 152
>CR533534-1|CAG38565.1| 414|Homo sapiens TARDBP protein.
Length = 414
Score = 33.5 bits (73), Expect = 0.72
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = -2
Query: 153 EADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHF 46
E D+ + FG V + + K+ TGH KGF +V F
Sbjct: 117 EQDLKEYFSTFGEVLMVQVKKDLKTGHSKGFGFVRF 152
>BC095435-1|AAH95435.1| 414|Homo sapiens TAR DNA binding protein
protein.
Length = 414
Score = 33.5 bits (73), Expect = 0.72
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = -2
Query: 153 EADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHF 46
E D+ + FG V + + K+ TGH KGF +V F
Sbjct: 117 EQDLKEYFSTFGEVLMVQVKKDLKTGHSKGFGFVRF 152
>BC071657-1|AAH71657.1| 414|Homo sapiens TARDBP protein protein.
Length = 414
Score = 33.5 bits (73), Expect = 0.72
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = -2
Query: 153 EADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHF 46
E D+ + FG V + + K+ TGH KGF +V F
Sbjct: 117 EQDLKEYFSTFGEVLMVQVKKDLKTGHSKGFGFVRF 152
>AL109811-2|CAI22099.1| 295|Homo sapiens TAR DNA binding protein
protein.
Length = 295
Score = 33.5 bits (73), Expect = 0.72
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = -2
Query: 153 EADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHF 46
E D+ + FG V + + K+ TGH KGF +V F
Sbjct: 117 EQDLKEYFSTFGEVLMVQVKKDLKTGHSKGFGFVRF 152
>AL109811-1|CAI22098.1| 414|Homo sapiens TAR DNA binding protein
protein.
Length = 414
Score = 33.5 bits (73), Expect = 0.72
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = -2
Query: 153 EADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHF 46
E D+ + FG V + + K+ TGH KGF +V F
Sbjct: 117 EQDLKEYFSTFGEVLMVQVKKDLKTGHSKGFGFVRF 152
>AK222754-1|BAD96474.1| 414|Homo sapiens TAR DNA binding protein
variant protein.
Length = 414
Score = 33.5 bits (73), Expect = 0.72
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = -2
Query: 153 EADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHF 46
E D+ + FG V + + K+ TGH KGF +V F
Sbjct: 117 EQDLKEYFSTFGEVLMVQVKKDLKTGHSKGFGFVRF 152
>Z95327-4|CAI42681.1| 225|Homo sapiens cleavage stimulation factor,
3' pre-RNA, subunit 2, 64kDa protein.
Length = 225
Score = 33.1 bits (72), Expect = 0.95
Identities = 14/49 (28%), Positives = 24/49 (48%)
Frame = -2
Query: 183 RISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKXQ 37
R+ N+ A E + D+ GPV L ++ TG KG+ + ++ Q
Sbjct: 10 RVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQ 58
>BC013889-1|AAH13889.1| 759|Homo sapiens RNA binding motif protein
28 protein.
Length = 759
Score = 33.1 bits (72), Expect = 0.95
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = -2
Query: 180 ISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHF 46
+ L A +++L GPV + ++ EK + C+GF YV F
Sbjct: 8 VGRLPPSARSEQLEELFSQVGPVKQCFVVTEKGSKACRGFGYVTF 52
Score = 30.7 bits (66), Expect = 5.1
Identities = 15/48 (31%), Positives = 25/48 (52%)
Frame = -2
Query: 180 ISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKXQ 37
I NLS + E ++ +L++ FG + + + T H KG A+ F Q
Sbjct: 339 IRNLSFDSEEEELGELLQQFGELKYVRIVLHPDTEHSKGCAFAQFMTQ 386
>AK001239-1|BAA91575.1| 759|Homo sapiens protein ( Homo sapiens
cDNA FLJ10377 fis, clone NT2RM2001989, weakly similar to
NUCLEOLAR PROTEIN NOP4. ).
Length = 759
Score = 33.1 bits (72), Expect = 0.95
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = -2
Query: 180 ISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHF 46
+ L A +++L GPV + ++ EK + C+GF YV F
Sbjct: 8 VGRLPPSARSEQLEELFSQVGPVKQCFVVTEKGSKACRGFGYVTF 52
Score = 30.7 bits (66), Expect = 5.1
Identities = 15/48 (31%), Positives = 25/48 (52%)
Frame = -2
Query: 180 ISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKXQ 37
I NLS + E ++ +L++ FG + + + T H KG A+ F Q
Sbjct: 339 IRNLSFDSEEEELGELLQQFGELKYVRIVLHPDTEHSKGCAFAQFMTQ 386
>U68063-1|AAB08701.1| 288|Homo sapiens transformer-2 beta protein.
Length = 288
Score = 32.7 bits (71), Expect = 1.3
Identities = 17/76 (22%), Positives = 38/76 (50%)
Frame = -2
Query: 270 SNKYIPPSSAGRIPGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAK 91
S+ + P S+ R G P + + + LS + E D+ ++ +GP+ + +
Sbjct: 95 SHSHSPMSTRRRHVGNRANP---DPNCCLGVFGLSLYTTERDLREVFSKYGPIADVSIVY 151
Query: 90 EKSTGHCKGFAYVHFK 43
++ + +GFA+V+F+
Sbjct: 152 DQQSRRSRGFAFVYFE 167
>U61267-1|AAC28242.1| 288|Homo sapiens htra2-beta protein.
Length = 288
Score = 32.7 bits (71), Expect = 1.3
Identities = 17/76 (22%), Positives = 38/76 (50%)
Frame = -2
Query: 270 SNKYIPPSSAGRIPGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAK 91
S+ + P S+ R G P + + + LS + E D+ ++ +GP+ + +
Sbjct: 95 SHSHSPMSTRRRHVGNRANP---DPNCCLGVFGLSLYTTERDLREVFSKYGPIADVSIVY 151
Query: 90 EKSTGHCKGFAYVHFK 43
++ + +GFA+V+F+
Sbjct: 152 DQQSRRSRGFAFVYFE 167
>BC005898-1|AAH05898.1| 288|Homo sapiens splicing factor,
arginine/serine-rich 10 (transformer 2 homolog,
Drosophila) protein.
Length = 288
Score = 32.7 bits (71), Expect = 1.3
Identities = 17/76 (22%), Positives = 38/76 (50%)
Frame = -2
Query: 270 SNKYIPPSSAGRIPGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAK 91
S+ + P S+ R G P + + + LS + E D+ ++ +GP+ + +
Sbjct: 95 SHSHSPMSTRRRHVGNRANP---DPNCCLGVFGLSLYTTERDLREVFSKYGPIADVSIVY 151
Query: 90 EKSTGHCKGFAYVHFK 43
++ + +GFA+V+F+
Sbjct: 152 DQQSRRSRGFAFVYFE 167
>BC000451-1|AAH00451.1| 288|Homo sapiens splicing factor,
arginine/serine-rich 10 (transformer 2 homolog,
Drosophila) protein.
Length = 288
Score = 32.7 bits (71), Expect = 1.3
Identities = 17/76 (22%), Positives = 38/76 (50%)
Frame = -2
Query: 270 SNKYIPPSSAGRIPGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAK 91
S+ + P S+ R G P + + + LS + E D+ ++ +GP+ + +
Sbjct: 95 SHSHSPMSTRRRHVGNRANP---DPNCCLGVFGLSLYTTERDLREVFSKYGPIADVSIVY 151
Query: 90 EKSTGHCKGFAYVHFK 43
++ + +GFA+V+F+
Sbjct: 152 DQQSRRSRGFAFVYFE 167
>BC000160-1|AAH00160.1| 288|Homo sapiens splicing factor,
arginine/serine-rich 10 (transformer 2 homolog,
Drosophila) protein.
Length = 288
Score = 32.7 bits (71), Expect = 1.3
Identities = 17/76 (22%), Positives = 38/76 (50%)
Frame = -2
Query: 270 SNKYIPPSSAGRIPGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAK 91
S+ + P S+ R G P + + + LS + E D+ ++ +GP+ + +
Sbjct: 95 SHSHSPMSTRRRHVGNRANP---DPNCCLGVFGLSLYTTERDLREVFSKYGPIADVSIVY 151
Query: 90 EKSTGHCKGFAYVHFK 43
++ + +GFA+V+F+
Sbjct: 152 DQQSRRSRGFAFVYFE 167
>AK098191-1|BAC05256.1| 252|Homo sapiens protein ( Homo sapiens
cDNA FLJ40872 fis, clone TUTER2000283, highly similar to
Homo sapiens transformer-2-beta (SFRS10) gene. ).
Length = 252
Score = 32.7 bits (71), Expect = 1.3
Identities = 17/76 (22%), Positives = 38/76 (50%)
Frame = -2
Query: 270 SNKYIPPSSAGRIPGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAK 91
S+ + P S+ R G P + + + LS + E D+ ++ +GP+ + +
Sbjct: 59 SHSHSPMSTRRRHVGNRANP---DPNCCLGVFGLSLYTTERDLREVFSKYGPIADVSIVY 115
Query: 90 EKSTGHCKGFAYVHFK 43
++ + +GFA+V+F+
Sbjct: 116 DQQSRRSRGFAFVYFE 131
>AF057159-1|AAD19277.1| 288|Homo sapiens transformer-2-beta isoform
1 protein.
Length = 288
Score = 32.7 bits (71), Expect = 1.3
Identities = 17/76 (22%), Positives = 38/76 (50%)
Frame = -2
Query: 270 SNKYIPPSSAGRIPGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAK 91
S+ + P S+ R G P + + + LS + E D+ ++ +GP+ + +
Sbjct: 95 SHSHSPMSTRRRHVGNRANP---DPNCCLGVFGLSLYTTERDLREVFSKYGPIADVSIVY 151
Query: 90 EKSTGHCKGFAYVHFK 43
++ + +GFA+V+F+
Sbjct: 152 DQQSRRSRGFAFVYFE 167
>AB209208-1|BAD92445.1| 278|Homo sapiens splicing factor,
arginine/serine-rich 10 (transformer 2 homolog,
Drosophila) va protein.
Length = 278
Score = 32.7 bits (71), Expect = 1.3
Identities = 17/76 (22%), Positives = 38/76 (50%)
Frame = -2
Query: 270 SNKYIPPSSAGRIPGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAK 91
S+ + P S+ R G P + + + LS + E D+ ++ +GP+ + +
Sbjct: 83 SHSHSPMSTRRRHVGNRANP---DPNCCLGVFGLSLYTTERDLREVFSKYGPIADVSIVY 139
Query: 90 EKSTGHCKGFAYVHFK 43
++ + +GFA+V+F+
Sbjct: 140 DQQSRRSRGFAFVYFE 155
>Z95327-3|CAI42680.1| 577|Homo sapiens cleavage stimulation factor,
3' pre-RNA, subunit 2, 64kDa protein.
Length = 577
Score = 32.3 bits (70), Expect = 1.7
Identities = 14/59 (23%), Positives = 27/59 (45%)
Frame = -2
Query: 213 PVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKXQ 37
P + ++ + N+ A E + D+ GPV L ++ TG KG+ + ++ Q
Sbjct: 9 PAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQ 67
>Z83819-6|CAB06072.2| 577|Homo sapiens cleavage stimulation factor,
3' pre-RNA, subunit 2, 64kDa protein.
Length = 577
Score = 32.3 bits (70), Expect = 1.7
Identities = 14/59 (23%), Positives = 27/59 (45%)
Frame = -2
Query: 213 PVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKXQ 37
P + ++ + N+ A E + D+ GPV L ++ TG KG+ + ++ Q
Sbjct: 9 PAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQ 67
>X03910-1|CAA27544.1| 225|Homo sapiens protein ( Human mRNA for
hnRNP C protein cross-reacting with C1 and C2 hnRNP
core proteins. ).
Length = 225
Score = 32.3 bits (70), Expect = 1.7
Identities = 18/65 (27%), Positives = 28/65 (43%)
Frame = -2
Query: 231 PGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYV 52
P R + +E V I + LS E I + GFG V + L + T +GF ++
Sbjct: 159 PKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFI 218
Query: 51 HFKXQ 37
F +
Sbjct: 219 TFNQE 223
>U51586-1|AAB41656.1| 541|Homo sapiens siah binding protein 1
protein.
Length = 541
Score = 32.3 bits (70), Expect = 1.7
Identities = 17/71 (23%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Frame = -2
Query: 252 PSSAGRI-PGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTG 76
PS+ G+ P DQ I ++++ + DI + + FG + LA++ +TG
Sbjct: 187 PSNIGQAQPIIDQLAEEARAFNRIYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTG 246
Query: 75 HCKGFAYVHFK 43
KG+ ++ ++
Sbjct: 247 KHKGYGFIEYE 257
>M85085-1|AAA35724.1| 577|Homo sapiens cleavage stimulation factor
protein.
Length = 577
Score = 32.3 bits (70), Expect = 1.7
Identities = 14/59 (23%), Positives = 27/59 (45%)
Frame = -2
Query: 213 PVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKXQ 37
P + ++ + N+ A E + D+ GPV L ++ TG KG+ + ++ Q
Sbjct: 9 PAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQ 67
>CR457143-1|CAG33424.1| 559|Homo sapiens SIAHBP1 protein.
Length = 559
Score = 32.3 bits (70), Expect = 1.7
Identities = 17/71 (23%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Frame = -2
Query: 252 PSSAGRI-PGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTG 76
PS+ G+ P DQ I ++++ + DI + + FG + LA++ +TG
Sbjct: 205 PSNIGQAQPIIDQLAEEARAFNRIYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTG 264
Query: 75 HCKGFAYVHFK 43
KG+ ++ ++
Sbjct: 265 KHKGYGFIEYE 275
>BT009778-1|AAP88780.1| 577|Homo sapiens cleavage stimulation
factor, 3' pre-RNA, subunit 2, 64kDa protein.
Length = 577
Score = 32.3 bits (70), Expect = 1.7
Identities = 14/59 (23%), Positives = 27/59 (45%)
Frame = -2
Query: 213 PVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKXQ 37
P + ++ + N+ A E + D+ GPV L ++ TG KG+ + ++ Q
Sbjct: 9 PAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQ 67
>BC033135-1|AAH33135.1| 559|Homo sapiens Similar to cleavage
stimulation factor, 3' pre-RNA, subunit 2, 64kD protein.
Length = 559
Score = 32.3 bits (70), Expect = 1.7
Identities = 14/59 (23%), Positives = 27/59 (45%)
Frame = -2
Query: 213 PVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKXQ 37
P + ++ + N+ A E + D+ GPV L ++ TG KG+ + ++ Q
Sbjct: 8 PAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQ 66
>BC017712-1|AAH17712.1| 577|Homo sapiens cleavage stimulation
factor, 3' pre-RNA, subunit 2, 64kDa protein.
Length = 577
Score = 32.3 bits (70), Expect = 1.7
Identities = 14/59 (23%), Positives = 27/59 (45%)
Frame = -2
Query: 213 PVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKXQ 37
P + ++ + N+ A E + D+ GPV L ++ TG KG+ + ++ Q
Sbjct: 9 PAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQ 67
>BC011979-1|AAH11979.1| 516|Homo sapiens SIAHBP1 protein protein.
Length = 516
Score = 32.3 bits (70), Expect = 1.7
Identities = 17/71 (23%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Frame = -2
Query: 252 PSSAGRI-PGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTG 76
PS+ G+ P DQ I ++++ + DI + + FG + LA++ +TG
Sbjct: 162 PSNIGQAQPIIDQLAEEARAFNRIYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTG 221
Query: 75 HCKGFAYVHFK 43
KG+ ++ ++
Sbjct: 222 KHKGYGFIEYE 232
>BC011265-1|AAH11265.1| 516|Homo sapiens SIAHBP1 protein protein.
Length = 516
Score = 32.3 bits (70), Expect = 1.7
Identities = 17/71 (23%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Frame = -2
Query: 252 PSSAGRI-PGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTG 76
PS+ G+ P DQ I ++++ + DI + + FG + LA++ +TG
Sbjct: 162 PSNIGQAQPIIDQLAEEARAFNRIYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTG 221
Query: 75 HCKGFAYVHFK 43
KG+ ++ ++
Sbjct: 222 KHKGYGFIEYE 232
>BC009734-1|AAH09734.1| 499|Homo sapiens SIAHBP1 protein protein.
Length = 499
Score = 32.3 bits (70), Expect = 1.7
Identities = 17/71 (23%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Frame = -2
Query: 252 PSSAGRI-PGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTG 76
PS+ G+ P DQ I ++++ + DI + + FG + LA++ +TG
Sbjct: 145 PSNIGQAQPIIDQLAEEARAFNRIYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTG 204
Query: 75 HCKGFAYVHFK 43
KG+ ++ ++
Sbjct: 205 KHKGYGFIEYE 215
>BC008875-1|AAH08875.1| 542|Homo sapiens fuse-binding
protein-interacting repressor protein.
Length = 542
Score = 32.3 bits (70), Expect = 1.7
Identities = 17/71 (23%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Frame = -2
Query: 252 PSSAGRI-PGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTG 76
PS+ G+ P DQ I ++++ + DI + + FG + LA++ +TG
Sbjct: 188 PSNIGQAQPIIDQLAEEARAFNRIYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTG 247
Query: 75 HCKGFAYVHFK 43
KG+ ++ ++
Sbjct: 248 KHKGYGFIEYE 258
>AF217197-1|AAF27522.2| 542|Homo sapiens FBP-interacting repressor
protein.
Length = 542
Score = 32.3 bits (70), Expect = 1.7
Identities = 17/71 (23%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Frame = -2
Query: 252 PSSAGRI-PGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTG 76
PS+ G+ P DQ I ++++ + DI + + FG + LA++ +TG
Sbjct: 188 PSNIGQAQPIIDQLAEEARAFNRIYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTG 247
Query: 75 HCKGFAYVHFK 43
KG+ ++ ++
Sbjct: 248 KHKGYGFIEYE 258
>AF190744-1|AAF05605.1| 556|Homo sapiens poly-U binding splicing
factor PUF60 protein.
Length = 556
Score = 32.3 bits (70), Expect = 1.7
Identities = 17/71 (23%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Frame = -2
Query: 252 PSSAGRI-PGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTG 76
PS+ G+ P DQ I ++++ + DI + + FG + LA++ +TG
Sbjct: 202 PSNIGQAQPIIDQLAEEARAFNRIYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTG 261
Query: 75 HCKGFAYVHFK 43
KG+ ++ ++
Sbjct: 262 KHKGYGFIEYE 272
>AF114818-1|AAF23589.1| 559|Homo sapiens Ro
ribonucleoprotein-binding protein 1 protein.
Length = 559
Score = 32.3 bits (70), Expect = 1.7
Identities = 17/71 (23%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Frame = -2
Query: 252 PSSAGRI-PGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTG 76
PS+ G+ P DQ I ++++ + DI + + FG + LA++ +TG
Sbjct: 205 PSNIGQAQPIIDQLAEEARAFNRIYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTG 264
Query: 75 HCKGFAYVHFK 43
KG+ ++ ++
Sbjct: 265 KHKGYGFIEYE 275
>U23803-1|AAA65094.1| 305|Homo sapiens heterogeneous
ribonucleoprotein A0 protein.
Length = 305
Score = 31.9 bits (69), Expect = 2.2
Identities = 15/57 (26%), Positives = 26/57 (45%)
Frame = -2
Query: 213 PVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFK 43
P V + + L E D+ + FG V K + +K +G +GF +V+F+
Sbjct: 91 PGAHAKVKKLFVGGLKGDVAEGDLIEHFSQFGTVEKAEIIADKQSGKKRGFGFVYFQ 147
>CR456986-1|CAG33267.1| 305|Homo sapiens HNRPA0 protein.
Length = 305
Score = 31.9 bits (69), Expect = 2.2
Identities = 15/57 (26%), Positives = 26/57 (45%)
Frame = -2
Query: 213 PVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFK 43
P V + + L E D+ + FG V K + +K +G +GF +V+F+
Sbjct: 91 PGAHAKVKKLFVGGLKGDVAEGDLIEHFSQFGTVEKAEIIADKQSGKKRGFGFVYFQ 147
>BC030249-1|AAH30249.1| 305|Homo sapiens heterogeneous nuclear
ribonucleoprotein A0 protein.
Length = 305
Score = 31.9 bits (69), Expect = 2.2
Identities = 15/57 (26%), Positives = 26/57 (45%)
Frame = -2
Query: 213 PVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFK 43
P V + + L E D+ + FG V K + +K +G +GF +V+F+
Sbjct: 91 PGAHAKVKKLFVGGLKGDVAEGDLIEHFSQFGTVEKAEIIADKQSGKKRGFGFVYFQ 147
>BC028976-1|AAH28976.1| 305|Homo sapiens heterogeneous nuclear
ribonucleoprotein A0 protein.
Length = 305
Score = 31.9 bits (69), Expect = 2.2
Identities = 15/57 (26%), Positives = 26/57 (45%)
Frame = -2
Query: 213 PVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFK 43
P V + + L E D+ + FG V K + +K +G +GF +V+F+
Sbjct: 91 PGAHAKVKKLFVGGLKGDVAEGDLIEHFSQFGTVEKAEIIADKQSGKKRGFGFVYFQ 147
>BC019271-1|AAH19271.1| 305|Homo sapiens heterogeneous nuclear
ribonucleoprotein A0 protein.
Length = 305
Score = 31.9 bits (69), Expect = 2.2
Identities = 15/57 (26%), Positives = 26/57 (45%)
Frame = -2
Query: 213 PVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFK 43
P V + + L E D+ + FG V K + +K +G +GF +V+F+
Sbjct: 91 PGAHAKVKKLFVGGLKGDVAEGDLIEHFSQFGTVEKAEIIADKQSGKKRGFGFVYFQ 147
>BC018949-1|AAH18949.1| 305|Homo sapiens heterogeneous nuclear
ribonucleoprotein A0 protein.
Length = 305
Score = 31.9 bits (69), Expect = 2.2
Identities = 15/57 (26%), Positives = 26/57 (45%)
Frame = -2
Query: 213 PVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFK 43
P V + + L E D+ + FG V K + +K +G +GF +V+F+
Sbjct: 91 PGAHAKVKKLFVGGLKGDVAEGDLIEHFSQFGTVEKAEIIADKQSGKKRGFGFVYFQ 147
>BC012980-1|AAH12980.1| 305|Homo sapiens heterogeneous nuclear
ribonucleoprotein A0 protein.
Length = 305
Score = 31.9 bits (69), Expect = 2.2
Identities = 15/57 (26%), Positives = 26/57 (45%)
Frame = -2
Query: 213 PVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFK 43
P V + + L E D+ + FG V K + +K +G +GF +V+F+
Sbjct: 91 PGAHAKVKKLFVGGLKGDVAEGDLIEHFSQFGTVEKAEIIADKQSGKKRGFGFVYFQ 147
>BC012457-1|AAH12457.1| 227|Homo sapiens Similar to nucleolar
protein interacting with the FHA domain of pKi-67
protein.
Length = 227
Score = 31.9 bits (69), Expect = 2.2
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = -2
Query: 123 FGPVHKLYLAKEKSTGHCKGFAYVHFKXQ 37
FG V + L++ K TG+ KG+A+V F+ +
Sbjct: 2 FGTVTRFRLSRSKRTGNSKGYAFVEFESE 30
>BC011972-1|AAH11972.1| 305|Homo sapiens heterogeneous nuclear
ribonucleoprotein A0 protein.
Length = 305
Score = 31.9 bits (69), Expect = 2.2
Identities = 15/57 (26%), Positives = 26/57 (45%)
Frame = -2
Query: 213 PVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFK 43
P V + + L E D+ + FG V K + +K +G +GF +V+F+
Sbjct: 91 PGAHAKVKKLFVGGLKGDVAEGDLIEHFSQFGTVEKAEIIADKQSGKKRGFGFVYFQ 147
>BC009284-1|AAH09284.1| 305|Homo sapiens heterogeneous nuclear
ribonucleoprotein A0 protein.
Length = 305
Score = 31.9 bits (69), Expect = 2.2
Identities = 15/57 (26%), Positives = 26/57 (45%)
Frame = -2
Query: 213 PVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFK 43
P V + + L E D+ + FG V K + +K +G +GF +V+F+
Sbjct: 91 PGAHAKVKKLFVGGLKGDVAEGDLIEHFSQFGTVEKAEIIADKQSGKKRGFGFVYFQ 147
>BC007271-1|AAH07271.1| 305|Homo sapiens heterogeneous nuclear
ribonucleoprotein A0 protein.
Length = 305
Score = 31.9 bits (69), Expect = 2.2
Identities = 15/57 (26%), Positives = 26/57 (45%)
Frame = -2
Query: 213 PVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFK 43
P V + + L E D+ + FG V K + +K +G +GF +V+F+
Sbjct: 91 PGAHAKVKKLFVGGLKGDVAEGDLIEHFSQFGTVEKAEIIADKQSGKKRGFGFVYFQ 147
>BC001008-1|AAH01008.1| 305|Homo sapiens heterogeneous nuclear
ribonucleoprotein A0 protein.
Length = 305
Score = 31.9 bits (69), Expect = 2.2
Identities = 15/57 (26%), Positives = 26/57 (45%)
Frame = -2
Query: 213 PVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFK 43
P V + + L E D+ + FG V K + +K +G +GF +V+F+
Sbjct: 91 PGAHAKVKKLFVGGLKGDVAEGDLIEHFSQFGTVEKAEIIADKQSGKKRGFGFVYFQ 147
>AK222716-1|BAD96436.1| 759|Homo sapiens RNA binding motif protein
28 variant protein.
Length = 759
Score = 31.9 bits (69), Expect = 2.2
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = -2
Query: 180 ISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHF 46
+ L A + +L GPV + ++ EK + C+GF YV F
Sbjct: 8 VGRLPPSARSEQLGELFSQVGPVKQCFVVTEKGSKACRGFGYVTF 52
Score = 30.7 bits (66), Expect = 5.1
Identities = 15/48 (31%), Positives = 25/48 (52%)
Frame = -2
Query: 180 ISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKXQ 37
I NLS + E ++ +L++ FG + + + T H KG A+ F Q
Sbjct: 339 IRNLSFDSEEEELGELLQQFGELKYVRIVLHPDTEHSKGCAFAQFMTQ 386
>AF057159-3|AAD19278.1| 188|Homo sapiens transformer-2-beta isoform
3 protein.
Length = 188
Score = 31.9 bits (69), Expect = 2.2
Identities = 11/46 (23%), Positives = 27/46 (58%)
Frame = -2
Query: 180 ISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFK 43
+ LS + E D+ ++ +GP+ + + ++ + +GFA+V+F+
Sbjct: 22 VFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFE 67
>AY236872-1|AAP75556.1| 419|Homo sapiens RNA binding motif single
stranded interacting protein 3 isoform transcript vari
protein.
Length = 419
Score = 31.5 bits (68), Expect = 2.9
Identities = 15/60 (25%), Positives = 32/60 (53%)
Frame = -2
Query: 207 RREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKXQGRC 28
+ +D T + ISNL E ++++++K FGPV + ++ + G +G + + +C
Sbjct: 134 QEQDPTNLYISNLPISMDEQELENMLKPFGPVISTRILRD-ANGVSRGVGFARMESTEKC 192
>U76713-1|AAC50956.1| 331|Homo sapiens ABBP-1 protein.
Length = 331
Score = 31.1 bits (67), Expect = 3.8
Identities = 20/72 (27%), Positives = 32/72 (44%), Gaps = 2/72 (2%)
Frame = -2
Query: 252 PSSAGRIPGRDQPPVRR--EDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKST 79
P + R RDQ + ED + + LS + D+ D FG V + + +T
Sbjct: 46 PRAGIRTAPRDQINASKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNT 105
Query: 78 GHCKGFAYVHFK 43
G +GF ++ FK
Sbjct: 106 GRSRGFGFILFK 117
>M65028-1|AAA36575.1| 284|Homo sapiens hnRNP type A/B protein
protein.
Length = 284
Score = 31.1 bits (67), Expect = 3.8
Identities = 20/72 (27%), Positives = 32/72 (44%), Gaps = 2/72 (2%)
Frame = -2
Query: 252 PSSAGRIPGRDQPPVRR--EDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKST 79
P + R RDQ + ED + + LS + D+ D FG V + + +T
Sbjct: 46 PRAGIRTAPRDQINASKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNT 105
Query: 78 GHCKGFAYVHFK 43
G +GF ++ FK
Sbjct: 106 GRSRGFGFILFK 117
>U28686-1|AAB17212.1| 157|Homo sapiens RNPL protein.
Length = 157
Score = 30.7 bits (66), Expect = 5.1
Identities = 10/36 (27%), Positives = 21/36 (58%)
Frame = -2
Query: 153 EADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHF 46
E ++D FGP+ ++ + K++ T +GF ++ F
Sbjct: 19 EQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITF 54
>BC006825-1|AAH06825.1| 157|Homo sapiens RNA binding motif (RNP1,
RRM) protein 3 protein.
Length = 157
Score = 30.7 bits (66), Expect = 5.1
Identities = 10/36 (27%), Positives = 21/36 (58%)
Frame = -2
Query: 153 EADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHF 46
E ++D FGP+ ++ + K++ T +GF ++ F
Sbjct: 19 EQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITF 54
>U03469-1|AAC52063.1| 477|Homo sapiens glucagon receptor protein.
Length = 477
Score = 30.3 bits (65), Expect = 6.7
Identities = 12/41 (29%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +1
Query: 334 VLEWTI-QCQMVSLTCTTLKDNIAGWWLKTIKLPVIWALTL 453
V+ W + +C ++ C T DN+ WW+ ++ PV A+ +
Sbjct: 279 VVPWAVVKCLFENVQCWTSNDNMGFWWI--LRFPVFLAILI 317
>L20316-1|AAA53628.1| 477|Homo sapiens glucagon receptor protein.
Length = 477
Score = 30.3 bits (65), Expect = 6.7
Identities = 12/41 (29%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +1
Query: 334 VLEWTI-QCQMVSLTCTTLKDNIAGWWLKTIKLPVIWALTL 453
V+ W + +C ++ C T DN+ WW+ ++ PV A+ +
Sbjct: 279 VVPWAVVKCLFENVQCWTSNDNMGFWWI--LRFPVFLAILI 317
>BC112041-1|AAI12042.1| 477|Homo sapiens glucagon receptor protein.
Length = 477
Score = 30.3 bits (65), Expect = 6.7
Identities = 12/41 (29%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +1
Query: 334 VLEWTI-QCQMVSLTCTTLKDNIAGWWLKTIKLPVIWALTL 453
V+ W + +C ++ C T DN+ WW+ ++ PV A+ +
Sbjct: 279 VVPWAVVKCLFENVQCWTSNDNMGFWWI--LRFPVFLAILI 317
>BC104854-1|AAI04855.1| 477|Homo sapiens glucagon receptor protein.
Length = 477
Score = 30.3 bits (65), Expect = 6.7
Identities = 12/41 (29%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +1
Query: 334 VLEWTI-QCQMVSLTCTTLKDNIAGWWLKTIKLPVIWALTL 453
V+ W + +C ++ C T DN+ WW+ ++ PV A+ +
Sbjct: 279 VVPWAVVKCLFENVQCWTSNDNMGFWWI--LRFPVFLAILI 317
>BC036708-1|AAH36708.1| 332|Homo sapiens heterogeneous nuclear
ribonucleoprotein A/B protein.
Length = 332
Score = 29.9 bits (64), Expect = 8.9
Identities = 15/53 (28%), Positives = 25/53 (47%)
Frame = -2
Query: 201 EDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFK 43
ED + + LS + D+ D FG V + + +TG +GF ++ FK
Sbjct: 67 EDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFK 119
>BC009359-1|AAH09359.1| 285|Homo sapiens heterogeneous nuclear
ribonucleoprotein A/B protein.
Length = 285
Score = 29.9 bits (64), Expect = 8.9
Identities = 15/53 (28%), Positives = 25/53 (47%)
Frame = -2
Query: 201 EDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFK 43
ED + + LS + D+ D FG V + + +TG +GF ++ FK
Sbjct: 67 EDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFK 119
>BC004561-1|AAH04561.1| 285|Homo sapiens heterogeneous nuclear
ribonucleoprotein A/B protein.
Length = 285
Score = 29.9 bits (64), Expect = 8.9
Identities = 15/53 (28%), Positives = 25/53 (47%)
Frame = -2
Query: 201 EDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFK 43
ED + + LS + D+ D FG V + + +TG +GF ++ FK
Sbjct: 67 EDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFK 119
>BC002625-1|AAH02625.1| 285|Homo sapiens heterogeneous nuclear
ribonucleoprotein A/B protein.
Length = 285
Score = 29.9 bits (64), Expect = 8.9
Identities = 15/53 (28%), Positives = 25/53 (47%)
Frame = -2
Query: 201 EDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFK 43
ED + + LS + D+ D FG V + + +TG +GF ++ FK
Sbjct: 67 EDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFK 119
>BC001616-1|AAH01616.1| 285|Homo sapiens heterogeneous nuclear
ribonucleoprotein A/B protein.
Length = 285
Score = 29.9 bits (64), Expect = 8.9
Identities = 15/53 (28%), Positives = 25/53 (47%)
Frame = -2
Query: 201 EDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFK 43
ED + + LS + D+ D FG V + + +TG +GF ++ FK
Sbjct: 67 EDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFK 119
>AK223425-1|BAD97145.1| 332|Homo sapiens heterogeneous nuclear
ribonucleoprotein AB isoform a variant protein.
Length = 332
Score = 29.9 bits (64), Expect = 8.9
Identities = 15/53 (28%), Positives = 25/53 (47%)
Frame = -2
Query: 201 EDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFK 43
ED + + LS + D+ D FG V + + +TG +GF ++ FK
Sbjct: 67 EDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFK 119
>AK097657-1|BAC05134.1| 332|Homo sapiens protein ( Homo sapiens
cDNA FLJ40338 fis, clone TESTI2032067, highly similar to
Rattus norvegicus mRNA for type A/B hnRNP protein p40.
).
Length = 332
Score = 29.9 bits (64), Expect = 8.9
Identities = 15/53 (28%), Positives = 25/53 (47%)
Frame = -2
Query: 201 EDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFK 43
ED + + LS + D+ D FG V + + +TG +GF ++ FK
Sbjct: 67 EDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFK 119
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,846,597
Number of Sequences: 237096
Number of extensions: 1596481
Number of successful extensions: 4443
Number of sequences better than 10.0: 123
Number of HSP's better than 10.0 without gapping: 4188
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4435
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7839245960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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