Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_pT_E06
         (567 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    21   6.5  
DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    21   8.6  
DQ026032-1|AAY87891.1|  566|Apis mellifera nicotinic acetylcholi...    21   8.6  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    21   8.6  
AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly pro...    21   8.6  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    21   8.6  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             21   8.6  

>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 14/57 (24%), Positives = 26/57 (45%)
 Frame = -3

Query: 268  TLEGNDYVLRVAQFGHTVCLSGFMALDVPKPMGPLWILGDVFIGKYYTEFDAGNRQL 98
            T +G DY LR+    H V ++ +  ++       L I  D  +     E +AG +++
Sbjct: 1453 TFDGKDYPLRLGPCWHAV-MTTYPRINPDNHNEKLHIPKDKSVSVLSRENEAGQKEV 1508


>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 10/30 (33%), Positives = 14/30 (46%)
 Frame = -3

Query: 313 PHLPRVTFTIAGNDFTLEGNDYVLRVAQFG 224
           PH+P  + +I      +EG  YV  V   G
Sbjct: 273 PHVPEYSSSIIMELHNIEGTHYVKIVYYLG 302


>DQ026032-1|AAY87891.1|  566|Apis mellifera nicotinic acetylcholine
           receptor alpha3subunit protein.
          Length = 566

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 10/24 (41%), Positives = 11/24 (45%)
 Frame = -2

Query: 281 RERLHARGQRLRAPGGAIRAHGVP 210
           R+ LH R       G A R HG P
Sbjct: 425 RDELHPRELEAVNLGSACRIHGSP 448


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 10/30 (33%), Positives = 14/30 (46%)
 Frame = -3

Query: 313 PHLPRVTFTIAGNDFTLEGNDYVLRVAQFG 224
           PH+P  + +I      +EG  YV  V   G
Sbjct: 288 PHVPEYSSSIIMELHNIEGTHYVKIVYYLG 317


>AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly
           protein 8 protein.
          Length = 416

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 10/16 (62%), Positives = 11/16 (68%), Gaps = 1/16 (6%)
 Frame = -3

Query: 304 PR-VTFTIAGNDFTLE 260
           PR  TFTI G  FTL+
Sbjct: 233 PRYTTFTINGESFTLQ 248


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 6/10 (60%), Positives = 6/10 (60%)
 Frame = -1

Query: 219 RCACPASWRW 190
           R  CPA W W
Sbjct: 380 RNGCPADWLW 389


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 8/29 (27%), Positives = 15/29 (51%)
 Frame = +2

Query: 152  PQDPQRAHGLRHVQRHEAGQAHRVPELRH 238
            PQ PQ+    +  Q+ +  Q +  P+L +
Sbjct: 1447 PQQPQQQQQQQQQQQQQQQQLNHYPDLHN 1475


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 143,652
Number of Sequences: 438
Number of extensions: 3067
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 16440594
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)