Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_pT_E05
         (535 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071732-1|AAL49354.1|  157|Drosophila melanogaster RH44960p pro...   152   3e-37
AY071136-1|AAL48758.1|  157|Drosophila melanogaster RE17737p pro...   152   3e-37
AE014297-251|AAF52027.1|  157|Drosophila melanogaster CG2099-PA ...   152   3e-37
DQ902587-1|ABI94369.1| 2009|Drosophila melanogaster calmodulin-b...    30   1.7  
AE013599-870|AAF58934.2| 1504|Drosophila melanogaster CG8809-PA ...    29   3.0  
AF181640-1|AAD55426.1|  852|Drosophila melanogaster BcDNA.GH0981...    28   9.2  
AE014297-3670|AAF56367.1|  863|Drosophila melanogaster CG11168-P...    28   9.2  
AE014134-398|AAN10427.1|  852|Drosophila melanogaster CG4272-PB,...    28   9.2  
AE014134-397|AAF51264.2|  852|Drosophila melanogaster CG4272-PA,...    28   9.2  

>AY071732-1|AAL49354.1|  157|Drosophila melanogaster RH44960p
           protein.
          Length = 157

 Score =  152 bits (369), Expect = 3e-37
 Identities = 66/103 (64%), Positives = 83/103 (80%)
 Frame = -3

Query: 359 RHGRLYAKAVFTGYKRGLRNQHENTALLKVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIP 180
           RHGRL+AKAVFTGYKRGLRNQHEN A+LK+EGA+ +    FY GK CVYVY+A+ +  +P
Sbjct: 46  RHGRLFAKAVFTGYKRGLRNQHENQAILKIEGARRKEHGSFYVGKRCVYVYKAETKKCVP 105

Query: 179 GGPRGKKTKLRAIWGKVTRPHGNSGSVRAKFKSNLPAQAMGHK 51
             P  +KT++RA+WGKVTR HGN+G+VRA+F  NLP  AMGH+
Sbjct: 106 QHPE-RKTRVRAVWGKVTRIHGNTGAVRARFNRNLPGHAMGHR 147


>AY071136-1|AAL48758.1|  157|Drosophila melanogaster RE17737p
           protein.
          Length = 157

 Score =  152 bits (369), Expect = 3e-37
 Identities = 66/103 (64%), Positives = 83/103 (80%)
 Frame = -3

Query: 359 RHGRLYAKAVFTGYKRGLRNQHENTALLKVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIP 180
           RHGRL+AKAVFTGYKRGLRNQHEN A+LK+EGA+ +    FY GK CVYVY+A+ +  +P
Sbjct: 46  RHGRLFAKAVFTGYKRGLRNQHENQAILKIEGARRKEHGSFYVGKRCVYVYKAETKKCVP 105

Query: 179 GGPRGKKTKLRAIWGKVTRPHGNSGSVRAKFKSNLPAQAMGHK 51
             P  +KT++RA+WGKVTR HGN+G+VRA+F  NLP  AMGH+
Sbjct: 106 QHPE-RKTRVRAVWGKVTRIHGNTGAVRARFNRNLPGHAMGHR 147


>AE014297-251|AAF52027.1|  157|Drosophila melanogaster CG2099-PA
           protein.
          Length = 157

 Score =  152 bits (369), Expect = 3e-37
 Identities = 66/103 (64%), Positives = 83/103 (80%)
 Frame = -3

Query: 359 RHGRLYAKAVFTGYKRGLRNQHENTALLKVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIP 180
           RHGRL+AKAVFTGYKRGLRNQHEN A+LK+EGA+ +    FY GK CVYVY+A+ +  +P
Sbjct: 46  RHGRLFAKAVFTGYKRGLRNQHENQAILKIEGARRKEHGSFYVGKRCVYVYKAETKKCVP 105

Query: 179 GGPRGKKTKLRAIWGKVTRPHGNSGSVRAKFKSNLPAQAMGHK 51
             P  +KT++RA+WGKVTR HGN+G+VRA+F  NLP  AMGH+
Sbjct: 106 QHPE-RKTRVRAVWGKVTRIHGNTGAVRARFNRNLPGHAMGHR 147


>DQ902587-1|ABI94369.1| 2009|Drosophila melanogaster
            calmodulin-binding transcriptionactivator protein.
          Length = 2009

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 13/42 (30%), Positives = 22/42 (52%)
 Frame = -1

Query: 409  QQLLWSPQRSFAKHQSPATAGCTQRPYSQDISVVYATSTRTP 284
            + +  SP+   +   +PAT+     P S  +S+  +TST TP
Sbjct: 954  EAMCMSPEHRSSSQPTPATSSAGSIPSSVSVSISVSTSTHTP 995


>AE013599-870|AAF58934.2| 1504|Drosophila melanogaster CG8809-PA
           protein.
          Length = 1504

 Score = 29.5 bits (63), Expect = 3.0
 Identities = 13/42 (30%), Positives = 22/42 (52%)
 Frame = -1

Query: 409 QQLLWSPQRSFAKHQSPATAGCTQRPYSQDISVVYATSTRTP 284
           + +  SP+   +   +PAT+     P S  +S+  +TST TP
Sbjct: 405 EAMCMSPEHRSSSQPTPATSSAGSIPSSVSVSISVSTSTPTP 446


>AF181640-1|AAD55426.1|  852|Drosophila melanogaster BcDNA.GH09817
           protein.
          Length = 852

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 22/84 (26%), Positives = 35/84 (41%)
 Frame = +3

Query: 105 ARVAMWAGHLAPDSTQLGFFATGTSGNWCPLLSSVHIDAMLASIKDCIITVFCSFNLEES 284
           A+   +AG+   DS   G FA+G+  N  P    ++      S +  I +   ++    +
Sbjct: 589 AQSQSYAGYAQLDSLDSGLFASGS--NATPSYGELYQSLSYGSTQ--ITSYTAAYQQHSA 644

Query: 285 GVLVLVA*TTLISCEYGLCVQPAV 356
              V VA     SC Y  C  P+V
Sbjct: 645 SPAVAVAPGAPSSCAYSSCAVPSV 668


>AE014297-3670|AAF56367.1|  863|Drosophila melanogaster CG11168-PA
           protein.
          Length = 863

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 16/37 (43%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
 Frame = +3

Query: 24  LEGYS-ITRILVSHSLGREVRLELGSDTARVAMWAGH 131
           L G+S I R+L+SH+   +V    GS    +A WAGH
Sbjct: 58  LNGHSNIVRLLLSHNALLDVPDIRGSTPLFLAAWAGH 94


>AE014134-398|AAN10427.1|  852|Drosophila melanogaster CG4272-PB,
           isoform B protein.
          Length = 852

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 22/84 (26%), Positives = 35/84 (41%)
 Frame = +3

Query: 105 ARVAMWAGHLAPDSTQLGFFATGTSGNWCPLLSSVHIDAMLASIKDCIITVFCSFNLEES 284
           A+   +AG+   DS   G FA+G+  N  P    ++      S +  I +   ++    +
Sbjct: 589 AQSQSYAGYAQLDSLDSGLFASGS--NATPSYGELYQSLSYGSTQ--ITSYTAAYQQHSA 644

Query: 285 GVLVLVA*TTLISCEYGLCVQPAV 356
              V VA     SC Y  C  P+V
Sbjct: 645 SPAVAVAPGAPSSCAYSSCAVPSV 668


>AE014134-397|AAF51264.2|  852|Drosophila melanogaster CG4272-PA,
           isoform A protein.
          Length = 852

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 22/84 (26%), Positives = 35/84 (41%)
 Frame = +3

Query: 105 ARVAMWAGHLAPDSTQLGFFATGTSGNWCPLLSSVHIDAMLASIKDCIITVFCSFNLEES 284
           A+   +AG+   DS   G FA+G+  N  P    ++      S +  I +   ++    +
Sbjct: 589 AQSQSYAGYAQLDSLDSGLFASGS--NATPSYGELYQSLSYGSTQ--ITSYTAAYQQHSA 644

Query: 285 GVLVLVA*TTLISCEYGLCVQPAV 356
              V VA     SC Y  C  P+V
Sbjct: 645 SPAVAVAPGAPSSCAYSSCAVPSV 668


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,120,657
Number of Sequences: 53049
Number of extensions: 520030
Number of successful extensions: 1306
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1262
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1303
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 2012211456
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)