Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P04_pT_E03
(607 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB090821-1|BAC57917.1| 353|Anopheles gambiae gag-like protein p... 31 0.022
AB090813-1|BAC57901.1| 724|Anopheles gambiae gag-like protein p... 30 0.050
M93691-1|AAA29366.1| 574|Anopheles gambiae protein ( Anopheles ... 27 0.36
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal... 27 0.62
AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein. 26 0.82
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different... 25 2.5
AJ438610-1|CAD27473.1| 838|Anopheles gambiae putative microtubu... 24 4.4
>AB090821-1|BAC57917.1| 353|Anopheles gambiae gag-like protein
protein.
Length = 353
Score = 31.5 bits (68), Expect = 0.022
Identities = 15/26 (57%), Positives = 19/26 (73%), Gaps = 1/26 (3%)
Frame = +2
Query: 425 RDRQPQRE-VVHAQREAQRRQLDQHQ 499
+ RQPQR+ VV Q++ QRRQ QHQ
Sbjct: 78 QQRQPQRQAVVGTQQQQQRRQQQQHQ 103
>AB090813-1|BAC57901.1| 724|Anopheles gambiae gag-like protein
protein.
Length = 724
Score = 30.3 bits (65), Expect = 0.050
Identities = 14/41 (34%), Positives = 26/41 (63%)
Frame = +2
Query: 395 RQQGDRRVEGRDRQPQREVVHAQREAQRRQLDQHQDVDQRQ 517
+QQG+R V + RQ +++ H Q++ Q++Q Q Q Q++
Sbjct: 291 QQQGERYVPPQLRQQRQQQQHQQQQQQQQQQRQQQQRQQQR 331
Score = 30.3 bits (65), Expect = 0.050
Identities = 15/50 (30%), Positives = 25/50 (50%)
Frame = +2
Query: 368 PAPSSDYNSRQQGDRRVEGRDRQPQREVVHAQREAQRRQLDQHQDVDQRQ 517
P +QQ ++ + + +Q Q++ QR+ Q+RQ Q Q QRQ
Sbjct: 299 PPQLRQQRQQQQHQQQQQQQQQQRQQQQRQQQRQQQQRQQQQQQQQQQRQ 348
Score = 29.9 bits (64), Expect = 0.067
Identities = 15/40 (37%), Positives = 24/40 (60%)
Frame = +2
Query: 395 RQQGDRRVEGRDRQPQREVVHAQREAQRRQLDQHQDVDQR 514
RQQ R+ + + +Q QR+ QR+ Q++Q QHQ Q+
Sbjct: 331 RQQQQRQQQQQQQQQQRQ--QQQRQQQQQQQQQHQQQQQQ 368
Score = 27.1 bits (57), Expect = 0.47
Identities = 12/43 (27%), Positives = 25/43 (58%)
Frame = +2
Query: 389 NSRQQGDRRVEGRDRQPQREVVHAQREAQRRQLDQHQDVDQRQ 517
+ +QQ ++ + + +Q Q++ QR+ Q++Q Q + QRQ
Sbjct: 311 HQQQQQQQQQQRQQQQRQQQRQQQQRQQQQQQQQQQRQQQQRQ 353
Score = 26.6 bits (56), Expect = 0.62
Identities = 15/40 (37%), Positives = 24/40 (60%)
Frame = +2
Query: 395 RQQGDRRVEGRDRQPQREVVHAQREAQRRQLDQHQDVDQR 514
RQQ RR E R+RQ Q++ Q++ Q++Q Q + Q+
Sbjct: 175 RQQRLRRRE-RERQQQQQQQQQQQQQQQQQQQQQRQQQQQ 213
Score = 25.4 bits (53), Expect = 1.4
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = +2
Query: 395 RQQGDRRVEGRDRQPQREVVHAQREAQRRQLDQHQDVDQRQ 517
RQQ ++ + + +Q QR+ Q++ ++Q Q Q Q+Q
Sbjct: 336 RQQQQQQQQQQRQQQQRQQQQQQQQQHQQQQQQWQQQQQQQ 376
>M93691-1|AAA29366.1| 574|Anopheles gambiae protein ( Anopheles
gambiae RT2 retroposon. ).
Length = 574
Score = 27.5 bits (58), Expect = 0.36
Identities = 9/31 (29%), Positives = 20/31 (64%)
Frame = +2
Query: 425 RDRQPQREVVHAQREAQRRQLDQHQDVDQRQ 517
+ RQPQR+ V ++ Q+ ++ Q Q + +++
Sbjct: 308 QQRQPQRQAVAGSQQQQQERMQQQQQLQRKR 338
>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
growth factor receptorprotein.
Length = 1433
Score = 26.6 bits (56), Expect = 0.62
Identities = 15/61 (24%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Frame = +2
Query: 341 RGTLQPHAYPAPSSDYNSRQQGDRRVEGRD-RQPQREVVHA-QREAQRRQLDQHQDVDQR 514
+G++ PH P P++ +++ + +QP + + H Q++ Q++Q Q Q Q
Sbjct: 1263 QGSMGPHTPPPPNTPNGMPTHQHSQIQLQPIQQPLQTLQHQYQQQLQQQQQQQQQQQQQH 1322
Query: 515 Q 517
Q
Sbjct: 1323 Q 1323
Score = 24.2 bits (50), Expect = 3.3
Identities = 12/48 (25%), Positives = 22/48 (45%)
Frame = +2
Query: 350 LQPHAYPAPSSDYNSRQQGDRRVEGRDRQPQREVVHAQREAQRRQLDQ 493
LQP P + + +QQ ++ + + +Q Q+ H Q + Q Q
Sbjct: 1290 LQPIQQPLQTLQHQYQQQLQQQQQQQQQQQQQHQQHQQHQLQHHHQPQ 1337
>AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.
Length = 1036
Score = 26.2 bits (55), Expect = 0.82
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -1
Query: 484 LSTLCLALGMHNFPLGLAVAALY 416
L+ LC G+HN P+G A +A Y
Sbjct: 541 LNGLCKLYGLHNIPVGGADSAKY 563
>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
differentiation regulator protein.
Length = 1283
Score = 24.6 bits (51), Expect = 2.5
Identities = 9/45 (20%), Positives = 25/45 (55%)
Frame = +2
Query: 383 DYNSRQQGDRRVEGRDRQPQREVVHAQREAQRRQLDQHQDVDQRQ 517
+ R+Q ++ ++++ + E QRE ++R+ +Q + +R+
Sbjct: 476 EQREREQREKEQREKEQREKEERERQQREKEQREREQREKERERE 520
>AJ438610-1|CAD27473.1| 838|Anopheles gambiae putative microtubule
binding protein protein.
Length = 838
Score = 23.8 bits (49), Expect = 4.4
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = -3
Query: 437 AGGRGPLHAGRPAVGSCSPRTG 372
+GGR PLHA + + PR G
Sbjct: 423 SGGRPPLHALKDFINKEPPRPG 444
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 340,990
Number of Sequences: 2352
Number of extensions: 5436
Number of successful extensions: 27
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 58870980
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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