Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_pT_E02
         (706 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D83735-1|BAA12090.1|  309|Homo sapiens neutral calponin protein.       34   0.43 
CR541831-1|CAG46630.1|  309|Homo sapiens CNN2 protein.                 34   0.43 
CR541810-1|CAG46609.1|  309|Homo sapiens CNN2 protein.                 34   0.43 
BC141833-1|AAI41834.1|  309|Homo sapiens calponin 2 protein.           34   0.43 
BC141818-1|AAI41819.1|  309|Homo sapiens calponin 2 protein.           34   0.43 
AK222924-1|BAD96644.1|  309|Homo sapiens calponin 2 isoform a va...    34   0.43 

>D83735-1|BAA12090.1|  309|Homo sapiens neutral calponin protein.
          Length = 309

 Score = 34.3 bits (75), Expect = 0.43
 Identities = 16/31 (51%), Positives = 18/31 (58%)
 Frame = -2

Query: 654 CPIGTVFKIGDADGTGNCEDPEDVPGCEDYY 562
           CP GTV   G   GTG+C DP +VP    YY
Sbjct: 274 CPQGTVAD-GAPSGTGDCPDPGEVPEYPPYY 303


>CR541831-1|CAG46630.1|  309|Homo sapiens CNN2 protein.
          Length = 309

 Score = 34.3 bits (75), Expect = 0.43
 Identities = 16/31 (51%), Positives = 18/31 (58%)
 Frame = -2

Query: 654 CPIGTVFKIGDADGTGNCEDPEDVPGCEDYY 562
           CP GTV   G   GTG+C DP +VP    YY
Sbjct: 274 CPQGTVAD-GAPSGTGDCPDPGEVPEYPPYY 303


>CR541810-1|CAG46609.1|  309|Homo sapiens CNN2 protein.
          Length = 309

 Score = 34.3 bits (75), Expect = 0.43
 Identities = 16/31 (51%), Positives = 18/31 (58%)
 Frame = -2

Query: 654 CPIGTVFKIGDADGTGNCEDPEDVPGCEDYY 562
           CP GTV   G   GTG+C DP +VP    YY
Sbjct: 274 CPQGTVAD-GAPSGTGDCPDPGEVPEYPPYY 303


>BC141833-1|AAI41834.1|  309|Homo sapiens calponin 2 protein.
          Length = 309

 Score = 34.3 bits (75), Expect = 0.43
 Identities = 16/31 (51%), Positives = 18/31 (58%)
 Frame = -2

Query: 654 CPIGTVFKIGDADGTGNCEDPEDVPGCEDYY 562
           CP GTV   G   GTG+C DP +VP    YY
Sbjct: 274 CPQGTVAD-GAPSGTGDCPDPGEVPEYPPYY 303


>BC141818-1|AAI41819.1|  309|Homo sapiens calponin 2 protein.
          Length = 309

 Score = 34.3 bits (75), Expect = 0.43
 Identities = 16/31 (51%), Positives = 18/31 (58%)
 Frame = -2

Query: 654 CPIGTVFKIGDADGTGNCEDPEDVPGCEDYY 562
           CP GTV   G   GTG+C DP +VP    YY
Sbjct: 274 CPQGTVAD-GAPSGTGDCPDPGEVPEYPPYY 303


>AK222924-1|BAD96644.1|  309|Homo sapiens calponin 2 isoform a
           variant protein.
          Length = 309

 Score = 34.3 bits (75), Expect = 0.43
 Identities = 16/31 (51%), Positives = 18/31 (58%)
 Frame = -2

Query: 654 CPIGTVFKIGDADGTGNCEDPEDVPGCEDYY 562
           CP GTV   G   GTG+C DP +VP    YY
Sbjct: 274 CPQGTVAD-GAPSGTGDCPDPGEVPEYPPYY 303


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,087,895
Number of Sequences: 237096
Number of extensions: 1560413
Number of successful extensions: 3598
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3437
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3598
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8175213644
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)