Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_pT_D22
         (589 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               22   3.9  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          21   9.0  
DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    21   9.0  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      21   9.0  

>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -3

Query: 533 FQEWXQDKCDVKGQPFCSLPN 471
           F++  Q KC+ +G  F  +PN
Sbjct: 762 FKDLVQKKCEERGILFMPIPN 782


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = -3

Query: 269 HVILFXRRKLSVLSNII 219
           HV L+ ++ L+VL NI+
Sbjct: 349 HVKLYTKQGLNVLGNIV 365


>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +3

Query: 21  TSRSTYLCNKXDYF 62
           +SR  Y C++ DYF
Sbjct: 111 SSRMEYECSRIDYF 124


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = -3

Query: 269 HVILFXRRKLSVLSNII 219
           HV L+ ++ L+VL NI+
Sbjct: 349 HVKLYTKQGLNVLGNIV 365


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,464
Number of Sequences: 438
Number of extensions: 3392
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17115420
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)