Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P04_pT_D20
(387 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U94586-1|AAB52726.1| 81|Homo sapiens NADH:ubiquinone oxidoredu... 47 2e-05
CR541716-1|CAG46517.1| 81|Homo sapiens NDUFA4 protein. 47 2e-05
CR407618-1|CAG28546.1| 81|Homo sapiens NDUFA4 protein. 47 2e-05
BC105295-1|AAI05296.1| 81|Homo sapiens NADH dehydrogenase (ubi... 47 2e-05
BC101796-1|AAI01797.1| 81|Homo sapiens NADH dehydrogenase (ubi... 47 2e-05
BC101794-1|AAI01795.1| 81|Homo sapiens NADH dehydrogenase (ubi... 47 2e-05
AF201077-1|AAF09253.1| 81|Homo sapiens NADH:ubiquinone oxidore... 47 2e-05
CR457176-1|CAG33457.1| 87|Homo sapiens LOC56901 protein. 45 1e-04
BC011910-1|AAH11910.1| 87|Homo sapiens NADH dehydrogenase (ubi... 45 1e-04
AF164796-1|AAF80760.1| 87|Homo sapiens NADH:ubiquinone oxidore... 45 1e-04
D42054-1|BAA07654.2| 475|Homo sapiens KIAA0092 protein. 29 4.0
BC039711-1|AAH39711.1| 270|Homo sapiens CEP57 protein protein. 29 4.0
BC029385-1|AAH29385.1| 450|Homo sapiens CEP57 protein protein. 29 4.0
BC001233-1|AAH01233.1| 500|Homo sapiens centrosomal protein 57k... 29 4.0
AY239292-1|AAP72184.1| 500|Homo sapiens proliferation-inducing ... 29 4.0
AY225092-1|AAO73938.1| 500|Homo sapiens translokin protein. 29 4.0
>U94586-1|AAB52726.1| 81|Homo sapiens NADH:ubiquinone
oxidoreductase MLRQ subunit protein.
Length = 81
Score = 47.2 bits (107), Expect = 2e-05
Identities = 20/34 (58%), Positives = 25/34 (73%)
Frame = -3
Query: 259 ALIPLYVCVGIGCGGAVFYTLRLALRNPDVSWNK 158
+LIPL+V +G G GA Y LRLAL NPDV W++
Sbjct: 14 SLIPLFVFIGTGATGATLYLLRLALFNPDVCWDR 47
Score = 34.3 bits (75), Expect = 0.14
Identities = 17/35 (48%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = -1
Query: 156 RPXPEPWEAYR-NKQYKFYSPIRDYSKEESPAPKY 55
R PEPW N QYKFYS DYSK + P +
Sbjct: 47 RNNPEPWNKLGPNDQYKFYSVNVDYSKLKKERPDF 81
>CR541716-1|CAG46517.1| 81|Homo sapiens NDUFA4 protein.
Length = 81
Score = 47.2 bits (107), Expect = 2e-05
Identities = 20/34 (58%), Positives = 25/34 (73%)
Frame = -3
Query: 259 ALIPLYVCVGIGCGGAVFYTLRLALRNPDVSWNK 158
+LIPL+V +G G GA Y LRLAL NPDV W++
Sbjct: 14 SLIPLFVFIGTGATGATLYLLRLALFNPDVCWDR 47
Score = 34.3 bits (75), Expect = 0.14
Identities = 17/35 (48%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = -1
Query: 156 RPXPEPWEAYR-NKQYKFYSPIRDYSKEESPAPKY 55
R PEPW N QYKFYS DYSK + P +
Sbjct: 47 RNNPEPWNKLGPNDQYKFYSVNVDYSKLKKERPDF 81
>CR407618-1|CAG28546.1| 81|Homo sapiens NDUFA4 protein.
Length = 81
Score = 47.2 bits (107), Expect = 2e-05
Identities = 20/34 (58%), Positives = 25/34 (73%)
Frame = -3
Query: 259 ALIPLYVCVGIGCGGAVFYTLRLALRNPDVSWNK 158
+LIPL+V +G G GA Y LRLAL NPDV W++
Sbjct: 14 SLIPLFVFIGTGATGATLYLLRLALFNPDVCWDR 47
Score = 34.3 bits (75), Expect = 0.14
Identities = 17/35 (48%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = -1
Query: 156 RPXPEPWEAYR-NKQYKFYSPIRDYSKEESPAPKY 55
R PEPW N QYKFYS DYSK + P +
Sbjct: 47 RNNPEPWNKLGPNDQYKFYSVNVDYSKLKKERPDF 81
>BC105295-1|AAI05296.1| 81|Homo sapiens NADH dehydrogenase
(ubiquinone) 1 alpha subcomplex, 4, 9kDa protein.
Length = 81
Score = 47.2 bits (107), Expect = 2e-05
Identities = 20/34 (58%), Positives = 25/34 (73%)
Frame = -3
Query: 259 ALIPLYVCVGIGCGGAVFYTLRLALRNPDVSWNK 158
+LIPL+V +G G GA Y LRLAL NPDV W++
Sbjct: 14 SLIPLFVFIGTGATGATLYLLRLALFNPDVCWDR 47
Score = 34.3 bits (75), Expect = 0.14
Identities = 17/35 (48%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = -1
Query: 156 RPXPEPWEAYR-NKQYKFYSPIRDYSKEESPAPKY 55
R PEPW N QYKFYS DYSK + P +
Sbjct: 47 RNNPEPWNKLGPNDQYKFYSVNVDYSKLKKERPDF 81
>BC101796-1|AAI01797.1| 81|Homo sapiens NADH dehydrogenase
(ubiquinone) 1 alpha subcomplex, 4, 9kDa protein.
Length = 81
Score = 47.2 bits (107), Expect = 2e-05
Identities = 20/34 (58%), Positives = 25/34 (73%)
Frame = -3
Query: 259 ALIPLYVCVGIGCGGAVFYTLRLALRNPDVSWNK 158
+LIPL+V +G G GA Y LRLAL NPDV W++
Sbjct: 14 SLIPLFVFIGTGATGATLYLLRLALFNPDVCWDR 47
Score = 34.3 bits (75), Expect = 0.14
Identities = 17/35 (48%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = -1
Query: 156 RPXPEPWEAYR-NKQYKFYSPIRDYSKEESPAPKY 55
R PEPW N QYKFYS DYSK + P +
Sbjct: 47 RNNPEPWNKLGPNDQYKFYSVNVDYSKLKKERPDF 81
>BC101794-1|AAI01795.1| 81|Homo sapiens NADH dehydrogenase
(ubiquinone) 1 alpha subcomplex, 4, 9kDa protein.
Length = 81
Score = 47.2 bits (107), Expect = 2e-05
Identities = 20/34 (58%), Positives = 25/34 (73%)
Frame = -3
Query: 259 ALIPLYVCVGIGCGGAVFYTLRLALRNPDVSWNK 158
+LIPL+V +G G GA Y LRLAL NPDV W++
Sbjct: 14 SLIPLFVFIGTGATGATLYLLRLALFNPDVCWDR 47
Score = 34.3 bits (75), Expect = 0.14
Identities = 17/35 (48%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = -1
Query: 156 RPXPEPWEAYR-NKQYKFYSPIRDYSKEESPAPKY 55
R PEPW N QYKFYS DYSK + P +
Sbjct: 47 RNNPEPWNKLGPNDQYKFYSVNVDYSKLKKERPDF 81
>AF201077-1|AAF09253.1| 81|Homo sapiens NADH:ubiquinone
oxidoreductase MLRQ subunit protein.
Length = 81
Score = 47.2 bits (107), Expect = 2e-05
Identities = 20/34 (58%), Positives = 25/34 (73%)
Frame = -3
Query: 259 ALIPLYVCVGIGCGGAVFYTLRLALRNPDVSWNK 158
+LIPL+V +G G GA Y LRLAL NPDV W++
Sbjct: 14 SLIPLFVFIGTGATGATLYLLRLALFNPDVCWDR 47
Score = 34.3 bits (75), Expect = 0.14
Identities = 17/35 (48%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = -1
Query: 156 RPXPEPWEAYR-NKQYKFYSPIRDYSKEESPAPKY 55
R PEPW N QYKFYS DYSK + P +
Sbjct: 47 RNNPEPWNKLGPNDQYKFYSVNVDYSKLKKERPDF 81
>CR457176-1|CAG33457.1| 87|Homo sapiens LOC56901 protein.
Length = 87
Score = 44.8 bits (101), Expect = 1e-04
Identities = 18/37 (48%), Positives = 25/37 (67%)
Frame = -3
Query: 256 LIPLYVCVGIGCGGAVFYTLRLALRNPDVSWNKKTXP 146
+IP+ + +G G A Y LRLALR+PDV W++K P
Sbjct: 20 IIPMIGLICLGMGSAALYLLRLALRSPDVCWDRKNNP 56
Score = 30.7 bits (66), Expect = 1.7
Identities = 14/36 (38%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Frame = -1
Query: 159 RRPXPEPWEAYR-NKQYKFYSPIRDYSKEESPAPKY 55
R+ PEPW N QYKF + DY K + P +
Sbjct: 52 RKNNPEPWNRLSPNDQYKFLAVSTDYKKLKKDRPDF 87
>BC011910-1|AAH11910.1| 87|Homo sapiens NADH dehydrogenase
(ubiquinone) 1 alpha subcomplex, 4-like 2 protein.
Length = 87
Score = 44.8 bits (101), Expect = 1e-04
Identities = 18/37 (48%), Positives = 25/37 (67%)
Frame = -3
Query: 256 LIPLYVCVGIGCGGAVFYTLRLALRNPDVSWNKKTXP 146
+IP+ + +G G A Y LRLALR+PDV W++K P
Sbjct: 20 IIPMIGLICLGMGSAALYLLRLALRSPDVCWDRKNNP 56
Score = 30.7 bits (66), Expect = 1.7
Identities = 14/36 (38%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Frame = -1
Query: 159 RRPXPEPWEAYR-NKQYKFYSPIRDYSKEESPAPKY 55
R+ PEPW N QYKF + DY K + P +
Sbjct: 52 RKNNPEPWNRLSPNDQYKFLAVSTDYKKLKKDRPDF 87
>AF164796-1|AAF80760.1| 87|Homo sapiens NADH:ubiquinone
oxidoreductase MLRQ subunit homolog protein.
Length = 87
Score = 44.8 bits (101), Expect = 1e-04
Identities = 18/37 (48%), Positives = 25/37 (67%)
Frame = -3
Query: 256 LIPLYVCVGIGCGGAVFYTLRLALRNPDVSWNKKTXP 146
+IP+ + +G G A Y LRLALR+PDV W++K P
Sbjct: 20 IIPMIGLICLGMGSAALYLLRLALRSPDVCWDRKNNP 56
Score = 30.7 bits (66), Expect = 1.7
Identities = 14/36 (38%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Frame = -1
Query: 159 RRPXPEPWEAYR-NKQYKFYSPIRDYSKEESPAPKY 55
R+ PEPW N QYKF + DY K + P +
Sbjct: 52 RKNNPEPWNRLSPNDQYKFLAVSTDYKKLKKDRPDF 87
>D42054-1|BAA07654.2| 475|Homo sapiens KIAA0092 protein.
Length = 475
Score = 29.5 bits (63), Expect = 4.0
Identities = 13/45 (28%), Positives = 24/45 (53%)
Frame = +1
Query: 154 SSCSKIHQDYAKPDAEYRTQLHHILSPHIHTEGSKPYASSNLRGS 288
+S S + +A+P + + H SP++ KP+ +S+LR S
Sbjct: 10 ASGSHLSNSFAEPSRSNGSMVRHSSSPYVVYPSDKPFLNSDLRRS 54
>BC039711-1|AAH39711.1| 270|Homo sapiens CEP57 protein protein.
Length = 270
Score = 29.5 bits (63), Expect = 4.0
Identities = 13/45 (28%), Positives = 24/45 (53%)
Frame = +1
Query: 154 SSCSKIHQDYAKPDAEYRTQLHHILSPHIHTEGSKPYASSNLRGS 288
+S S + +A+P + + H SP++ KP+ +S+LR S
Sbjct: 9 ASGSHLSNSFAEPSRSNGSMVRHSSSPYVVYPSDKPFLNSDLRRS 53
>BC029385-1|AAH29385.1| 450|Homo sapiens CEP57 protein protein.
Length = 450
Score = 29.5 bits (63), Expect = 4.0
Identities = 13/45 (28%), Positives = 24/45 (53%)
Frame = +1
Query: 154 SSCSKIHQDYAKPDAEYRTQLHHILSPHIHTEGSKPYASSNLRGS 288
+S S + +A+P + + H SP++ KP+ +S+LR S
Sbjct: 9 ASGSHLSNSFAEPSRSNGSMVRHSSSPYVVYPSDKPFLNSDLRRS 53
>BC001233-1|AAH01233.1| 500|Homo sapiens centrosomal protein 57kDa
protein.
Length = 500
Score = 29.5 bits (63), Expect = 4.0
Identities = 13/45 (28%), Positives = 24/45 (53%)
Frame = +1
Query: 154 SSCSKIHQDYAKPDAEYRTQLHHILSPHIHTEGSKPYASSNLRGS 288
+S S + +A+P + + H SP++ KP+ +S+LR S
Sbjct: 9 ASGSHLSNSFAEPSRSNGSMVRHSSSPYVVYPSDKPFLNSDLRRS 53
>AY239292-1|AAP72184.1| 500|Homo sapiens proliferation-inducing
protein 8 protein.
Length = 500
Score = 29.5 bits (63), Expect = 4.0
Identities = 13/45 (28%), Positives = 24/45 (53%)
Frame = +1
Query: 154 SSCSKIHQDYAKPDAEYRTQLHHILSPHIHTEGSKPYASSNLRGS 288
+S S + +A+P + + H SP++ KP+ +S+LR S
Sbjct: 9 ASGSHLSNSFAEPSRSNGSMVRHSSSPYVVYPSDKPFLNSDLRRS 53
>AY225092-1|AAO73938.1| 500|Homo sapiens translokin protein.
Length = 500
Score = 29.5 bits (63), Expect = 4.0
Identities = 13/45 (28%), Positives = 24/45 (53%)
Frame = +1
Query: 154 SSCSKIHQDYAKPDAEYRTQLHHILSPHIHTEGSKPYASSNLRGS 288
+S S + +A+P + + H SP++ KP+ +S+LR S
Sbjct: 9 ASGSHLSNSFAEPSRSNGSMVRHSSSPYVVYPSDKPFLNSDLRRS 53
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 56,644,118
Number of Sequences: 237096
Number of extensions: 1171077
Number of successful extensions: 3106
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 3016
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3106
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2641190740
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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