Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P04_pT_D16
(745 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Y08999-1|CAA70203.1| 370|Homo sapiens Sop2p-like protein protein. 109 8e-24
AK223015-1|BAD96735.1| 365|Homo sapiens actin related protein 2... 109 1e-23
BC054027-1|AAH54027.1| 370|Homo sapiens actin related protein 2... 109 1e-23
BC047889-1|AAH47889.2| 370|Homo sapiens actin related protein 2... 109 1e-23
BC039594-1|AAH39594.2| 370|Homo sapiens actin related protein 2... 109 1e-23
AB209059-1|BAD92296.1| 401|Homo sapiens actin related protein 2... 106 7e-23
BC007555-1|AAH07555.1| 372|Homo sapiens actin related protein 2... 95 3e-19
BC002988-1|AAH02988.2| 372|Homo sapiens actin related protein 2... 95 3e-19
BC002562-1|AAH02562.1| 372|Homo sapiens actin related protein 2... 95 3e-19
AF006084-1|AAB64189.1| 372|Homo sapiens p41-Arc protein. 95 3e-19
BC104483-1|AAI04484.1| 495|Homo sapiens SUV420H1 protein protein. 36 0.20
BC103498-1|AAI03499.1| 885|Homo sapiens suppressor of variegati... 36 0.20
BC099714-1|AAH99714.1| 885|Homo sapiens suppressor of variegati... 36 0.20
BC098121-1|AAH98121.1| 471|Homo sapiens SUV420H1 protein protein. 36 0.20
BC012933-1|AAH12933.1| 414|Homo sapiens SUV420H1 protein protein. 36 0.20
AK000046-1|BAA90905.1| 414|Homo sapiens protein ( Homo sapiens ... 36 0.20
AL133230-3|CAI21688.2| 946|Homo sapiens chromosome 20 open read... 30 7.6
>Y08999-1|CAA70203.1| 370|Homo sapiens Sop2p-like protein protein.
Length = 370
Score = 109 bits (263), Expect = 8e-24
Identities = 47/121 (38%), Positives = 81/121 (66%), Gaps = 1/121 (0%)
Frame = -2
Query: 744 YLPFLGCSWITXNSLIVAGHSCIPLLYCHDGDD-IKYVAKLDNTQRKESGGLSAMKKFQS 568
+LP L S+++ NS++ AGH C P+L+ +D + +V+KLD ++ +SAM++F++
Sbjct: 246 FLPLLSVSFVSENSVVAAGHDCCPMLFIYDDRGCLTFVSKLDIPKQSIQRNMSAMERFRN 305
Query: 567 LDRHARIETSDTFLDSIHQNAISCINIYKGTKSHTNKFSTSGLDGQLVIWDLDTLERSFE 388
+D+ A E +T L+++HQN+I+ ++IY+ K KF T+G+DG + IWD TLE S +
Sbjct: 306 MDKRATTEDRNTALETLHQNSITQVSIYEVDKQDCRKFCTTGIDGAMTIWDFKTLESSIQ 365
Query: 387 G 385
G
Sbjct: 366 G 366
>AK223015-1|BAD96735.1| 365|Homo sapiens actin related protein 2/3
complex subunit 1A variant protein.
Length = 365
Score = 109 bits (262), Expect = 1e-23
Identities = 47/121 (38%), Positives = 81/121 (66%), Gaps = 1/121 (0%)
Frame = -2
Query: 744 YLPFLGCSWITXNSLIVAGHSCIPLLYCHDGDD-IKYVAKLDNTQRKESGGLSAMKKFQS 568
+LP L S+++ NS++ AGH C P+L+ +D + +V+KLD ++ +SAM++F++
Sbjct: 241 FLPLLSVSFVSENSVVAAGHDCCPMLFNYDDHGCLTFVSKLDIPKQSIQRNMSAMERFRN 300
Query: 567 LDRHARIETSDTFLDSIHQNAISCINIYKGTKSHTNKFSTSGLDGQLVIWDLDTLERSFE 388
+D+ A E +T L+++HQN+I+ ++IY+ K KF T+G+DG + IWD TLE S +
Sbjct: 301 MDKRATTEDRNTALETLHQNSITQVSIYEVDKQDCRKFCTTGIDGAMTIWDFKTLESSIQ 360
Query: 387 G 385
G
Sbjct: 361 G 361
>BC054027-1|AAH54027.1| 370|Homo sapiens actin related protein 2/3
complex, subunit 1A, 41kDa protein.
Length = 370
Score = 109 bits (261), Expect = 1e-23
Identities = 47/121 (38%), Positives = 81/121 (66%), Gaps = 1/121 (0%)
Frame = -2
Query: 744 YLPFLGCSWITXNSLIVAGHSCIPLLYCHDGDD-IKYVAKLDNTQRKESGGLSAMKKFQS 568
+LP L S+++ NS++ AGH C P+L+ +D + +V+KLD ++ +SAM++F++
Sbjct: 246 FLPLLSVSFVSENSVVAAGHDCCPMLFNYDDRGCLTFVSKLDIPKQSIQRNMSAMERFRN 305
Query: 567 LDRHARIETSDTFLDSIHQNAISCINIYKGTKSHTNKFSTSGLDGQLVIWDLDTLERSFE 388
+D+ A E +T L+++HQN+I+ ++IY+ K KF T+G+DG + IWD TLE S +
Sbjct: 306 MDKRATTEDRNTALETLHQNSITQVSIYEVDKQDCRKFCTTGIDGAMTIWDFKTLESSIQ 365
Query: 387 G 385
G
Sbjct: 366 G 366
>BC047889-1|AAH47889.2| 370|Homo sapiens actin related protein 2/3
complex, subunit 1A, 41kDa protein.
Length = 370
Score = 109 bits (261), Expect = 1e-23
Identities = 47/121 (38%), Positives = 81/121 (66%), Gaps = 1/121 (0%)
Frame = -2
Query: 744 YLPFLGCSWITXNSLIVAGHSCIPLLYCHDGDD-IKYVAKLDNTQRKESGGLSAMKKFQS 568
+LP L S+++ NS++ AGH C P+L+ +D + +V+KLD ++ +SAM++F++
Sbjct: 246 FLPLLSVSFVSENSVVAAGHDCCPMLFNYDDRGCLTFVSKLDIPKQSIQRNMSAMERFRN 305
Query: 567 LDRHARIETSDTFLDSIHQNAISCINIYKGTKSHTNKFSTSGLDGQLVIWDLDTLERSFE 388
+D+ A E +T L+++HQN+I+ ++IY+ K KF T+G+DG + IWD TLE S +
Sbjct: 306 MDKRATTEDRNTALETLHQNSITQVSIYEVDKQDCRKFCTTGIDGAMTIWDFKTLESSIQ 365
Query: 387 G 385
G
Sbjct: 366 G 366
>BC039594-1|AAH39594.2| 370|Homo sapiens actin related protein 2/3
complex, subunit 1A, 41kDa protein.
Length = 370
Score = 109 bits (261), Expect = 1e-23
Identities = 47/121 (38%), Positives = 81/121 (66%), Gaps = 1/121 (0%)
Frame = -2
Query: 744 YLPFLGCSWITXNSLIVAGHSCIPLLYCHDGDD-IKYVAKLDNTQRKESGGLSAMKKFQS 568
+LP L S+++ NS++ AGH C P+L+ +D + +V+KLD ++ +SAM++F++
Sbjct: 246 FLPLLSVSFVSENSVVAAGHDCCPMLFNYDDRGCLTFVSKLDIPKQSIQRNMSAMERFRN 305
Query: 567 LDRHARIETSDTFLDSIHQNAISCINIYKGTKSHTNKFSTSGLDGQLVIWDLDTLERSFE 388
+D+ A E +T L+++HQN+I+ ++IY+ K KF T+G+DG + IWD TLE S +
Sbjct: 306 MDKRATTEDRNTALETLHQNSITQVSIYEVDKQDCRKFCTTGIDGAMTIWDFKTLESSIQ 365
Query: 387 G 385
G
Sbjct: 366 G 366
>AB209059-1|BAD92296.1| 401|Homo sapiens actin related protein 2/3
complex subunit 1A variant protein.
Length = 401
Score = 106 bits (255), Expect = 7e-23
Identities = 46/120 (38%), Positives = 80/120 (66%), Gaps = 1/120 (0%)
Frame = -2
Query: 744 YLPFLGCSWITXNSLIVAGHSCIPLLYCHDGDD-IKYVAKLDNTQRKESGGLSAMKKFQS 568
+LP L S+++ NS++ AGH C P+L+ +D + +V+KLD ++ +SAM++F++
Sbjct: 277 FLPLLSVSFVSENSVVAAGHDCCPMLFNYDDRGCLTFVSKLDIPKQSIQRNMSAMERFRN 336
Query: 567 LDRHARIETSDTFLDSIHQNAISCINIYKGTKSHTNKFSTSGLDGQLVIWDLDTLERSFE 388
+D+ A E +T L+++HQN+I+ ++IY+ K KF T+G+DG + IWD TLE S +
Sbjct: 337 MDKRATTEDRNTALETLHQNSITQVSIYEVDKQDCRKFCTTGIDGAMTIWDFKTLESSIQ 396
>BC007555-1|AAH07555.1| 372|Homo sapiens actin related protein 2/3
complex, subunit 1B, 41kDa protein.
Length = 372
Score = 94.7 bits (225), Expect = 3e-19
Identities = 45/123 (36%), Positives = 78/123 (63%), Gaps = 5/123 (4%)
Frame = -2
Query: 741 LPFLGCSWITXNSLIVAGHSCIPLLYCHDGDD--IKYVAKLDNTQRKESGGLSAMKKFQS 568
LP L ++IT NSL+ AGH C P+L+ +D + + +LD ++ GL+A ++FQ+
Sbjct: 245 LPLLALTFITDNSLVAAGHDCFPVLFTYDAAAGMLSFGGRLDVPKQSSQRGLTARERFQN 304
Query: 567 LDRHARIE---TSDTFLDSIHQNAISCINIYKGTKSHTNKFSTSGLDGQLVIWDLDTLER 397
LD+ A E + LDS+H+N++S I++ G K+ ++F T+G+DG + IWD+ +LE
Sbjct: 305 LDKKASSEGGTAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVKSLES 364
Query: 396 SFE 388
+ +
Sbjct: 365 ALK 367
>BC002988-1|AAH02988.2| 372|Homo sapiens actin related protein 2/3
complex, subunit 1B, 41kDa protein.
Length = 372
Score = 94.7 bits (225), Expect = 3e-19
Identities = 45/123 (36%), Positives = 78/123 (63%), Gaps = 5/123 (4%)
Frame = -2
Query: 741 LPFLGCSWITXNSLIVAGHSCIPLLYCHDGDD--IKYVAKLDNTQRKESGGLSAMKKFQS 568
LP L ++IT NSL+ AGH C P+L+ +D + + +LD ++ GL+A ++FQ+
Sbjct: 245 LPLLALTFITDNSLVAAGHDCFPVLFTYDAAAGMLSFGGRLDVPKQSSQRGLTARERFQN 304
Query: 567 LDRHARIE---TSDTFLDSIHQNAISCINIYKGTKSHTNKFSTSGLDGQLVIWDLDTLER 397
LD+ A E + LDS+H+N++S I++ G K+ ++F T+G+DG + IWD+ +LE
Sbjct: 305 LDKKASSEGGTAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVKSLES 364
Query: 396 SFE 388
+ +
Sbjct: 365 ALK 367
>BC002562-1|AAH02562.1| 372|Homo sapiens actin related protein 2/3
complex, subunit 1B, 41kDa protein.
Length = 372
Score = 94.7 bits (225), Expect = 3e-19
Identities = 45/123 (36%), Positives = 78/123 (63%), Gaps = 5/123 (4%)
Frame = -2
Query: 741 LPFLGCSWITXNSLIVAGHSCIPLLYCHDGDD--IKYVAKLDNTQRKESGGLSAMKKFQS 568
LP L ++IT NSL+ AGH C P+L+ +D + + +LD ++ GL+A ++FQ+
Sbjct: 245 LPLLALTFITDNSLVAAGHDCFPVLFTYDAAAGMLSFGGRLDVPKQSSQRGLTARERFQN 304
Query: 567 LDRHARIE---TSDTFLDSIHQNAISCINIYKGTKSHTNKFSTSGLDGQLVIWDLDTLER 397
LD+ A E + LDS+H+N++S I++ G K+ ++F T+G+DG + IWD+ +LE
Sbjct: 305 LDKKASSEGGTAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVKSLES 364
Query: 396 SFE 388
+ +
Sbjct: 365 ALK 367
>AF006084-1|AAB64189.1| 372|Homo sapiens p41-Arc protein.
Length = 372
Score = 94.7 bits (225), Expect = 3e-19
Identities = 45/123 (36%), Positives = 78/123 (63%), Gaps = 5/123 (4%)
Frame = -2
Query: 741 LPFLGCSWITXNSLIVAGHSCIPLLYCHDGDD--IKYVAKLDNTQRKESGGLSAMKKFQS 568
LP L ++IT NSL+ AGH C P+L+ +D + + +LD ++ GL+A ++FQ+
Sbjct: 245 LPLLALTFITDNSLVAAGHDCFPVLFTYDAAAGMLSFGGRLDVPKQSSQRGLTARERFQN 304
Query: 567 LDRHARIE---TSDTFLDSIHQNAISCINIYKGTKSHTNKFSTSGLDGQLVIWDLDTLER 397
LD+ A E + LDS+H+N++S I++ G K+ ++F T+G+DG + IWD+ +LE
Sbjct: 305 LDKKASSEGGTAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVKSLES 364
Query: 396 SFE 388
+ +
Sbjct: 365 ALK 367
>BC104483-1|AAI04484.1| 495|Homo sapiens SUV420H1 protein protein.
Length = 495
Score = 35.5 bits (78), Expect = 0.20
Identities = 20/55 (36%), Positives = 28/55 (50%)
Frame = -2
Query: 660 HDGDDIKYVAKLDNTQRKESGGLSAMKKFQSLDRHARIETSDTFLDSIHQNAISC 496
HD D+ YVAKL+N SG S K Q L R E ++ + +H+N + C
Sbjct: 361 HDNDNNLYVAKLNNGFNSGSGSSSTKLKIQ-LKRDE--ENRGSYTEGLHENGVCC 412
>BC103498-1|AAI03499.1| 885|Homo sapiens suppressor of variegation
4-20 homolog 1, isoform 1 protein.
Length = 885
Score = 35.5 bits (78), Expect = 0.20
Identities = 20/55 (36%), Positives = 28/55 (50%)
Frame = -2
Query: 660 HDGDDIKYVAKLDNTQRKESGGLSAMKKFQSLDRHARIETSDTFLDSIHQNAISC 496
HD D+ YVAKL+N SG S K Q L R E ++ + +H+N + C
Sbjct: 751 HDNDNNLYVAKLNNGFNSGSGSSSTKLKIQ-LKRDE--ENRGSYTEGLHENGVCC 802
>BC099714-1|AAH99714.1| 885|Homo sapiens suppressor of variegation
4-20 homolog 1 (Drosophila) protein.
Length = 885
Score = 35.5 bits (78), Expect = 0.20
Identities = 20/55 (36%), Positives = 28/55 (50%)
Frame = -2
Query: 660 HDGDDIKYVAKLDNTQRKESGGLSAMKKFQSLDRHARIETSDTFLDSIHQNAISC 496
HD D+ YVAKL+N SG S K Q L R E ++ + +H+N + C
Sbjct: 751 HDNDNNLYVAKLNNGFNSGSGSSSTKLKIQ-LKRDE--ENRGSYTEGLHENGVCC 802
>BC098121-1|AAH98121.1| 471|Homo sapiens SUV420H1 protein protein.
Length = 471
Score = 35.5 bits (78), Expect = 0.20
Identities = 20/55 (36%), Positives = 28/55 (50%)
Frame = -2
Query: 660 HDGDDIKYVAKLDNTQRKESGGLSAMKKFQSLDRHARIETSDTFLDSIHQNAISC 496
HD D+ YVAKL+N SG S K Q L R E ++ + +H+N + C
Sbjct: 337 HDNDNNLYVAKLNNGFNSGSGSSSTKLKIQ-LKRDE--ENRGSYTEGLHENGVCC 388
>BC012933-1|AAH12933.1| 414|Homo sapiens SUV420H1 protein protein.
Length = 414
Score = 35.5 bits (78), Expect = 0.20
Identities = 20/55 (36%), Positives = 28/55 (50%)
Frame = -2
Query: 660 HDGDDIKYVAKLDNTQRKESGGLSAMKKFQSLDRHARIETSDTFLDSIHQNAISC 496
HD D+ YVAKL+N SG S K Q L R E ++ + +H+N + C
Sbjct: 280 HDNDNNLYVAKLNNGFNSGSGSSSTKLKIQ-LKRDE--ENRGSYTEGLHENGVCC 331
>AK000046-1|BAA90905.1| 414|Homo sapiens protein ( Homo sapiens
cDNA FLJ20039 fis, clone COL00364. ).
Length = 414
Score = 35.5 bits (78), Expect = 0.20
Identities = 20/55 (36%), Positives = 28/55 (50%)
Frame = -2
Query: 660 HDGDDIKYVAKLDNTQRKESGGLSAMKKFQSLDRHARIETSDTFLDSIHQNAISC 496
HD D+ YVAKL+N SG S K Q L R E ++ + +H+N + C
Sbjct: 280 HDNDNNLYVAKLNNGFNSGSGSSSTKLKIQ-LKRDE--ENRGSYTEGLHENGVCC 331
>AL133230-3|CAI21688.2| 946|Homo sapiens chromosome 20 open reading
frame 175 protein.
Length = 946
Score = 30.3 bits (65), Expect = 7.6
Identities = 13/21 (61%), Positives = 14/21 (66%)
Frame = +3
Query: 165 CIFESFKFLRAEFTLDCFDLF 227
CI ESF FL A+F LD LF
Sbjct: 566 CILESFAFLNADFALDELSLF 586
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,298,221
Number of Sequences: 237096
Number of extensions: 1782610
Number of successful extensions: 3359
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 3281
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3345
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8903143626
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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