Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P04_pT_D15
(305 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY118790-1|AAM50650.1| 68|Drosophila melanogaster GH15688p pro... 37 0.004
AE014296-3570|AAF51742.1| 68|Drosophila melanogaster CG7181-PA... 37 0.004
BT023511-1|AAY84911.1| 671|Drosophila melanogaster LD05357p pro... 27 6.0
AY069190-1|AAL39335.1| 509|Drosophila melanogaster GH24215p pro... 27 6.0
AF276664-1|AAG29352.1| 671|Drosophila melanogaster comb gap pro... 27 6.0
AF276663-2|AAG29351.1| 375|Drosophila melanogaster comb gap spl... 27 6.0
AF276663-1|AAG29350.1| 671|Drosophila melanogaster comb gap pro... 27 6.0
AE013599-1840|AAM70989.1| 629|Drosophila melanogaster CG8367-PC... 27 6.0
AE013599-1839|AAG22267.1| 671|Drosophila melanogaster CG8367-PD... 27 6.0
AE013599-1838|AAM70988.1| 671|Drosophila melanogaster CG8367-PA... 27 6.0
AE013599-1837|AAF58283.2| 772|Drosophila melanogaster CG8367-PB... 27 6.0
>AY118790-1|AAM50650.1| 68|Drosophila melanogaster GH15688p
protein.
Length = 68
Score = 37.1 bits (82), Expect = 0.004
Identities = 17/48 (35%), Positives = 25/48 (52%)
Frame = -3
Query: 168 KNVAQQRNMSVICTPPRNKVSRGEMIFLASLMVVGWSAIPAWVLVNIK 25
++ Q R SV+ PP ++S E + L M IPAWVL +I+
Sbjct: 15 RSAMQSRCQSVVSGPPTQRISTAEKVILGGGMCAASLFIPAWVLYHIR 62
>AE014296-3570|AAF51742.1| 68|Drosophila melanogaster CG7181-PA
protein.
Length = 68
Score = 37.1 bits (82), Expect = 0.004
Identities = 17/48 (35%), Positives = 25/48 (52%)
Frame = -3
Query: 168 KNVAQQRNMSVICTPPRNKVSRGEMIFLASLMVVGWSAIPAWVLVNIK 25
++ Q R SV+ PP ++S E + L M IPAWVL +I+
Sbjct: 15 RSAMQSRCQSVVSGPPTQRISTAEKVILGGGMCAASLFIPAWVLYHIR 62
>BT023511-1|AAY84911.1| 671|Drosophila melanogaster LD05357p
protein.
Length = 671
Score = 26.6 bits (56), Expect = 6.0
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +1
Query: 64 AHHHQAGEEDHLTSGNLVS 120
AHHHQAG++ H + +VS
Sbjct: 419 AHHHQAGQQTHPQTITVVS 437
>AY069190-1|AAL39335.1| 509|Drosophila melanogaster GH24215p
protein.
Length = 509
Score = 26.6 bits (56), Expect = 6.0
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +1
Query: 64 AHHHQAGEEDHLTSGNLVS 120
AHHHQAG++ H + +VS
Sbjct: 257 AHHHQAGQQTHPQTITVVS 275
>AF276664-1|AAG29352.1| 671|Drosophila melanogaster comb gap
protein.
Length = 671
Score = 26.6 bits (56), Expect = 6.0
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +1
Query: 64 AHHHQAGEEDHLTSGNLVS 120
AHHHQAG++ H + +VS
Sbjct: 419 AHHHQAGQQTHPQTITVVS 437
>AF276663-2|AAG29351.1| 375|Drosophila melanogaster comb gap splice
variant cg14 protein.
Length = 375
Score = 26.6 bits (56), Expect = 6.0
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +1
Query: 64 AHHHQAGEEDHLTSGNLVS 120
AHHHQAG++ H + +VS
Sbjct: 117 AHHHQAGQQTHPQTITVVS 135
>AF276663-1|AAG29350.1| 671|Drosophila melanogaster comb gap
protein.
Length = 671
Score = 26.6 bits (56), Expect = 6.0
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +1
Query: 64 AHHHQAGEEDHLTSGNLVS 120
AHHHQAG++ H + +VS
Sbjct: 419 AHHHQAGQQTHPQTITVVS 437
>AE013599-1840|AAM70989.1| 629|Drosophila melanogaster CG8367-PC,
isoform C protein.
Length = 629
Score = 26.6 bits (56), Expect = 6.0
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +1
Query: 64 AHHHQAGEEDHLTSGNLVS 120
AHHHQAG++ H + +VS
Sbjct: 377 AHHHQAGQQTHPQTITVVS 395
>AE013599-1839|AAG22267.1| 671|Drosophila melanogaster CG8367-PD,
isoform D protein.
Length = 671
Score = 26.6 bits (56), Expect = 6.0
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +1
Query: 64 AHHHQAGEEDHLTSGNLVS 120
AHHHQAG++ H + +VS
Sbjct: 419 AHHHQAGQQTHPQTITVVS 437
>AE013599-1838|AAM70988.1| 671|Drosophila melanogaster CG8367-PA,
isoform A protein.
Length = 671
Score = 26.6 bits (56), Expect = 6.0
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +1
Query: 64 AHHHQAGEEDHLTSGNLVS 120
AHHHQAG++ H + +VS
Sbjct: 419 AHHHQAGQQTHPQTITVVS 437
>AE013599-1837|AAF58283.2| 772|Drosophila melanogaster CG8367-PB,
isoform B protein.
Length = 772
Score = 26.6 bits (56), Expect = 6.0
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +1
Query: 64 AHHHQAGEEDHLTSGNLVS 120
AHHHQAG++ H + +VS
Sbjct: 520 AHHHQAGQQTHPQTITVVS 538
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,403,426
Number of Sequences: 53049
Number of extensions: 252828
Number of successful extensions: 1073
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 888
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1073
length of database: 24,988,368
effective HSP length: 74
effective length of database: 21,062,742
effective search space used: 568694034
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -