Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_pT_D08
         (536 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    21   5.2  
AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory recept...    21   5.2  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    21   5.2  
AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cogna...    21   9.1  
AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock prote...    21   9.1  

>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 21.4 bits (43), Expect = 5.2
 Identities = 8/27 (29%), Positives = 13/27 (48%)
 Frame = -2

Query: 436 CYFNHASMVYRNTDVFNSLSCILSMYP 356
           CYFN++    R+   F  +  I  + P
Sbjct: 2   CYFNYSKKDIRSLSFFYKICNIFGIVP 28


>AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory receptor
           candidate 35 protein.
          Length = 251

 Score = 21.4 bits (43), Expect = 5.2
 Identities = 10/39 (25%), Positives = 19/39 (48%), Gaps = 7/39 (17%)
 Frame = -3

Query: 414 WYTVTL-------MSSTHYHVYSLCIRKGFNRNVDSFYI 319
           WY +T+       +S   YH+Y++    GF   V ++ +
Sbjct: 5   WYYITISMAFIIFVSLEIYHIYTVVEESGFENFVKTYLV 43


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 21.4 bits (43), Expect = 5.2
 Identities = 8/27 (29%), Positives = 13/27 (48%)
 Frame = -2

Query: 436 CYFNHASMVYRNTDVFNSLSCILSMYP 356
           CYFN++    R+   F  +  I  + P
Sbjct: 2   CYFNYSKKDIRSLSFFYKICNIFGIVP 28


>AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cognate
           70 protein.
          Length = 196

 Score = 20.6 bits (41), Expect = 9.1
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = +1

Query: 250 ISYFCMDLKKKKKL*ISG 303
           + Y   D KKK K  ISG
Sbjct: 66  VEYCTQDFKKKHKADISG 83


>AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock protein
           70 protein.
          Length = 196

 Score = 20.6 bits (41), Expect = 9.1
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = +1

Query: 250 ISYFCMDLKKKKKL*ISG 303
           + Y   D KKK K  ISG
Sbjct: 66  VEYCTQDFKKKHKADISG 83


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 125,640
Number of Sequences: 336
Number of extensions: 2686
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13097125
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)