Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_pT_D08
         (536 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY553322-1|AAT36323.1|  426|Anopheles gambiae G-protein coupled ...    27   0.53 
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    24   2.8  

>AY553322-1|AAT36323.1|  426|Anopheles gambiae G-protein coupled
           receptor 4 protein.
          Length = 426

 Score = 26.6 bits (56), Expect = 0.53
 Identities = 13/30 (43%), Positives = 18/30 (60%)
 Frame = -3

Query: 210 TFGFLA*PGLKCPRELSCVHNMHTVFLIAV 121
           TFGF A PGL+    L CV  M+ + L+ +
Sbjct: 230 TFGFFATPGLETAYNLFCVIAMYFLPLMII 259


>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
            chain protein.
          Length = 1024

 Score = 24.2 bits (50), Expect = 2.8
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = +3

Query: 132  KKQCAYYEHMTALWDILIRVTQEIQ 206
            K  C YYE  T+ W + +   Q+ Q
Sbjct: 975  KGHCHYYETQTSFWLVSLEDHQQFQ 999



 Score = 22.6 bits (46), Expect = 8.6
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = -3

Query: 162 SCVHNMHTVFLIAVFNNNIC 103
           SCV    T+ ++A   NN+C
Sbjct: 849 SCVRKFSTLPILACGQNNVC 868


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 527,521
Number of Sequences: 2352
Number of extensions: 9620
Number of successful extensions: 4
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 49897362
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)