Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_pT_D07
         (302 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT011526-1|AAS15662.1|   49|Drosophila melanogaster RH17559p pro...    36   0.007
AE014296-667|AAN11567.1|   49|Drosophila melanogaster CG32267-PA...    36   0.007
BT024227-1|ABC86289.1|  599|Drosophila melanogaster LP09277p pro...    26   8.0  
AE014296-1599|AAF50310.1|  599|Drosophila melanogaster CG4484-PA...    26   8.0  

>BT011526-1|AAS15662.1|   49|Drosophila melanogaster RH17559p
           protein.
          Length = 49

 Score = 36.3 bits (80), Expect = 0.007
 Identities = 19/46 (41%), Positives = 28/46 (60%)
 Frame = -3

Query: 225 MFRLPFGERVDPMEEKRQARENTINSVITFGIMCAIIRIAPLVLEH 88
           MFRL   +     E+KR A E   N ++ FG + A +R+AP+VL+H
Sbjct: 1   MFRLQQSQPDPAEEQKRVAAEVRFNFIL-FGAVIAAVRLAPIVLKH 45


>AE014296-667|AAN11567.1|   49|Drosophila melanogaster CG32267-PA
           protein.
          Length = 49

 Score = 36.3 bits (80), Expect = 0.007
 Identities = 19/46 (41%), Positives = 28/46 (60%)
 Frame = -3

Query: 225 MFRLPFGERVDPMEEKRQARENTINSVITFGIMCAIIRIAPLVLEH 88
           MFRL   +     E+KR A E   N ++ FG + A +R+AP+VL+H
Sbjct: 1   MFRLQQSQPDPAEEQKRVAAEVRFNFIL-FGAVIAAVRLAPIVLKH 45


>BT024227-1|ABC86289.1|  599|Drosophila melanogaster LP09277p
           protein.
          Length = 599

 Score = 26.2 bits (55), Expect = 8.0
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = -3

Query: 177 RQARENTINSVITFGIMCAIIRI 109
           R  R   I S+++FGIMC +I +
Sbjct: 115 RWGRRRPIISILSFGIMCGLILV 137


>AE014296-1599|AAF50310.1|  599|Drosophila melanogaster CG4484-PA
           protein.
          Length = 599

 Score = 26.2 bits (55), Expect = 8.0
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = -3

Query: 177 RQARENTINSVITFGIMCAIIRI 109
           R  R   I S+++FGIMC +I +
Sbjct: 115 RWGRRRPIISILSFGIMCGLILV 137


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,246,787
Number of Sequences: 53049
Number of extensions: 185503
Number of successful extensions: 421
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 416
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 419
length of database: 24,988,368
effective HSP length: 73
effective length of database: 21,115,791
effective search space used: 570126357
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)