Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_pT_D06
         (565 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A6X709 Cluster: Putative uncharacterized protein; n=1; ...    34   2.0  
UniRef50_Q23C36 Cluster: Putative uncharacterized protein; n=1; ...    34   2.0  
UniRef50_A0U668 Cluster: Putative uncharacterized protein precur...    33   4.6  
UniRef50_A0Y0X4 Cluster: Asparagine synthase, glutamine-hydrolyz...    33   6.1  
UniRef50_Q8E2E2 Cluster: Membrane protein, putative; n=5; Strept...    32   8.1  

>UniRef50_A6X709 Cluster: Putative uncharacterized protein; n=1;
           Ochrobactrum anthropi ATCC 49188|Rep: Putative
           uncharacterized protein - Ochrobactrum anthropi (strain
           ATCC 49188 / DSM 6882 / NCTC 12168)
          Length = 370

 Score = 34.3 bits (75), Expect = 2.0
 Identities = 20/75 (26%), Positives = 34/75 (45%)
 Frame = -3

Query: 434 KSSRAGVLDHQSTLKTAQNVRETVHSVRRPRCSSGKTSTDLLWLRLQQLRIYVSRLRRLS 255
           K S A  L   +      +V +T   +RR RC +G       ++R  +  I V+   R++
Sbjct: 20  KKSSAVPLLQNNAAHGLVHVSDTAPGIRRLRCGAG-----FRYVRFDKKAISVADRNRIA 74

Query: 254 RIQSPGLWIVRWLCC 210
           ++  P  W   W+CC
Sbjct: 75  KLAIPPAWNDVWICC 89


>UniRef50_Q23C36 Cluster: Putative uncharacterized protein; n=1;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 1524

 Score = 34.3 bits (75), Expect = 2.0
 Identities = 10/19 (52%), Positives = 15/19 (78%)
 Frame = -2

Query: 408 SSVNFENCSKCSRNCSFCS 352
           S++N++ C KCS NC FC+
Sbjct: 812 SNLNYQTCEKCSENCKFCT 830


>UniRef50_A0U668 Cluster: Putative uncharacterized protein
           precursor; n=6; Burkholderia|Rep: Putative
           uncharacterized protein precursor - Burkholderia
           cenocepacia MC0-3
          Length = 750

 Score = 33.1 bits (72), Expect = 4.6
 Identities = 18/63 (28%), Positives = 32/63 (50%)
 Frame = +2

Query: 275 IRISVIVVAVTRVDLLRSCQSYNEDGEQNEQFREHFEQFSKLTDDLGHRRVTT*KKSVHR 454
           +R+ +  V V R D ++  Q  +   +Q+E+ R+H E+   +  D+GH  V    +   R
Sbjct: 500 LRLDLDAVRVVRPDFVQGHQVGDHKADQHERNRDHVEREEAVQRDVGHDVVAANPQRQVR 559

Query: 455 PAE 463
           P E
Sbjct: 560 PDE 562


>UniRef50_A0Y0X4 Cluster: Asparagine synthase,
           glutamine-hydrolyzing; n=1; Alteromonadales bacterium
           TW-7|Rep: Asparagine synthase, glutamine-hydrolyzing -
           Alteromonadales bacterium TW-7
          Length = 553

 Score = 32.7 bits (71), Expect = 6.1
 Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 2/56 (3%)
 Frame = -3

Query: 509 GQYVFNTTHYREFK*IRPADEQIFFKS--SRAGVLDHQSTLKTAQNVRETVHSVRR 348
           G Y+F  THY E   IRP        S  ++    D  S  K   N  +T+HS+++
Sbjct: 165 GYYLFENTHYNEISCIRPGTRLEASSSGVTKTQYFDWCSLTKNNDNYEKTLHSLKQ 220


>UniRef50_Q8E2E2 Cluster: Membrane protein, putative; n=5;
           Streptococcus agalactiae|Rep: Membrane protein, putative
           - Streptococcus agalactiae serotype V
          Length = 463

 Score = 32.3 bits (70), Expect = 8.1
 Identities = 16/38 (42%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
 Frame = -2

Query: 129 ILKNIMILLFISFEILINNFRGLLSIYKTP-LFLSVFF 19
           +LK ++I        LI N +  LSI +TP LF+S+FF
Sbjct: 249 LLKKLVIYFIFFIATLIGNLKNELSILETPLLFISIFF 286


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 455,852,321
Number of Sequences: 1657284
Number of extensions: 7775305
Number of successful extensions: 24471
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 22793
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24451
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 37904934977
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)