Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P04_pT_D05
(715 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC18A7.01 ||SPBC4F6.19c|X-Pro dipeptidase |Schizosaccharomyces... 30 0.38
SPBC32H8.13c |mok12||alpha-1,3-glucan synthase Mok12|Schizosacch... 29 0.66
SPAC1527.01 |mok11|SPAC23D3.15|alpha-1,3-glucan synthase Mok11|S... 28 1.2
SPBC2G5.03 |||ATP binding protein|Schizosaccharomyces pombe|chr ... 27 2.0
SPCC584.01c |||sulfite reductase NADPH flavoprotein subunit |Sch... 27 2.7
SPAC1006.06 |rgf2||RhoGEF Rgf2|Schizosaccharomyces pombe|chr 1||... 27 2.7
SPAC24C9.07c |bgs2|meu21, pgs2|1,3-beta-glucan synthase subunit ... 26 4.7
SPCC1840.02c |bgs4|orb11, cwg1|1,3-beta-glucan synthase subunit ... 26 6.1
SPBC1734.01c ||SPBC337.17c|RNA-binding protein|Schizosaccharomyc... 25 8.1
SPBC31F10.14c |hip3|hir3|HIRA interacting protein Hip3|Schizosac... 25 8.1
SPAC4A8.06c |||esterase/lipase |Schizosaccharomyces pombe|chr 1|... 25 8.1
>SPBC18A7.01 ||SPBC4F6.19c|X-Pro dipeptidase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 451
Score = 29.9 bits (64), Expect = 0.38
Identities = 15/43 (34%), Positives = 25/43 (58%)
Frame = -1
Query: 502 VSLLKLTQPEAVTKLYNKAHVIQDMLIPIELLEKAIAFFHDEF 374
+S L L QP+ V +LY A + M+ ++ +AI+ H+EF
Sbjct: 37 LSFLSLLQPDTVQRLYQCA--VPSMIYVPPMINEAISIQHEEF 77
>SPBC32H8.13c |mok12||alpha-1,3-glucan synthase
Mok12|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2352
Score = 29.1 bits (62), Expect = 0.66
Identities = 16/48 (33%), Positives = 25/48 (52%)
Frame = +2
Query: 68 GVRLPXQLGSEARTLS*SLWSNICLNSSLXCVGIGI*HLEALVLDHEA 211
G+ LP G + L+ S+W + L + VG+G+ L+ L DH A
Sbjct: 2233 GINLPWA-GKASALLTKSVWLLLALWDGIQGVGVGVMLLQTLARDHVA 2279
>SPAC1527.01 |mok11|SPAC23D3.15|alpha-1,3-glucan synthase
Mok11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2397
Score = 28.3 bits (60), Expect = 1.2
Identities = 18/46 (39%), Positives = 25/46 (54%)
Frame = +2
Query: 68 GVRLPXQLGSEARTLS*SLWSNICLNSSLXCVGIGI*HLEALVLDH 205
G+ +P LG A LS LW + L ++ VGIGI L+ L +H
Sbjct: 2274 GIYVPF-LGKGAPYLSRMLWLYLGLLDTVQTVGIGIILLQTLTREH 2318
>SPBC2G5.03 |||ATP binding protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 335
Score = 27.5 bits (58), Expect = 2.0
Identities = 12/41 (29%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = -3
Query: 371 GIPYMVVSFQNIQQPWTAEDKTWR-GITDVCRYRSVWRSKS 252
G+P +VS+ ++ WT ++ R G + C Y V+R ++
Sbjct: 112 GLPMKIVSYADLYDGWTMDNVVARIGTKNNCTYCGVFRRQA 152
>SPCC584.01c |||sulfite reductase NADPH flavoprotein subunit
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1006
Score = 27.1 bits (57), Expect = 2.7
Identities = 9/31 (29%), Positives = 20/31 (64%)
Frame = +2
Query: 320 LSRVVEYFERTQPYRVYLEFVVKERNRFLQE 412
L+ + + F R QPY++Y++ V++ L++
Sbjct: 919 LTHIGQAFSRDQPYKIYIQDVMRSTKDMLKK 949
>SPAC1006.06 |rgf2||RhoGEF Rgf2|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1158
Score = 27.1 bits (57), Expect = 2.7
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +2
Query: 299 LARFYLQLSRVVEYFERTQPYRVYLEFVVKERNRFLQELNW 421
LAR+ L LS V++Y ++ P + V++ FL +LN+
Sbjct: 593 LARYPLLLSGVLKYTDKDNPDTENIPRVIEMIREFLTKLNY 633
>SPAC24C9.07c |bgs2|meu21, pgs2|1,3-beta-glucan synthase subunit
Bgs2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1894
Score = 26.2 bits (55), Expect = 4.7
Identities = 9/41 (21%), Positives = 19/41 (46%)
Frame = -3
Query: 389 LSRRIRGIPYMVVSFQNIQQPWTAEDKTWRGITDVCRYRSV 267
L ++ +P+ + F+N +T + W + YR+V
Sbjct: 953 LHKKFDDLPFYCIGFKNATPEYTLRTRIWASLRSQTLYRTV 993
>SPCC1840.02c |bgs4|orb11, cwg1|1,3-beta-glucan synthase subunit
Bgs4|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1955
Score = 25.8 bits (54), Expect = 6.1
Identities = 8/51 (15%), Positives = 23/51 (45%)
Frame = -3
Query: 419 N*ALGESDCVLSRRIRGIPYMVVSFQNIQQPWTAEDKTWRGITDVCRYRSV 267
N ++ E + ++ +P+ + F++ +T + W + YR++
Sbjct: 967 NDSVSEKEGTYKSKVDDLPFYCIGFKSAMPEYTLRTRIWASLRSQTLYRTI 1017
>SPBC1734.01c ||SPBC337.17c|RNA-binding protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 682
Score = 25.4 bits (53), Expect = 8.1
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = -3
Query: 491 EVDAARSRHQVVQQGSRDTRHANTN 417
+VD RSR+Q + G D AN+N
Sbjct: 412 DVDVIRSRYQKLLSGDADDFQANSN 436
>SPBC31F10.14c |hip3|hir3|HIRA interacting protein
Hip3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1630
Score = 25.4 bits (53), Expect = 8.1
Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 5/37 (13%)
Frame = +3
Query: 252 AFGTPYTP-----ISTNICDSSPGFIFSCPGLLNILK 347
+F T Y P + TNI D +PG + S L N+LK
Sbjct: 156 SFYTGYEPFDAERVFTNIDDLNPGKLISLQNLYNLLK 192
>SPAC4A8.06c |||esterase/lipase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 578
Score = 25.4 bits (53), Expect = 8.1
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = -1
Query: 637 AIEYIPLRDYYHRHTRSLFWELQDIISF 554
A +YIP ++HR +R +W + ++ SF
Sbjct: 259 AADYIPSEGFHHRASR--YWPITNLDSF 284
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,911,519
Number of Sequences: 5004
Number of extensions: 60016
Number of successful extensions: 166
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 162
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 166
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 333194204
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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