Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_pT_D05
         (715 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF026214-5|AAB71310.1|  525|Caenorhabditis elegans Hypothetical ...   231   5e-61
AL034489-1|CAA22461.1|  538|Caenorhabditis elegans Hypothetical ...   125   4e-29
Z81479-6|CAB03938.1|  411|Caenorhabditis elegans Hypothetical pr...    28   7.6  
AC006680-10|AAK72297.2|  335|Caenorhabditis elegans Seven tm rec...    28   7.6  

>AF026214-5|AAB71310.1|  525|Caenorhabditis elegans Hypothetical
           protein F52H2.6 protein.
          Length = 525

 Score =  231 bits (564), Expect = 5e-61
 Identities = 94/184 (51%), Positives = 133/184 (72%)
 Frame = -1

Query: 712 LNPIGVWHAEWFFKQVEKHLKRKRTAIEYIPLRDYYHRHTRSLFWELQDIISFGNNFIFR 533
           +NPIG W+ +WF+  VE  + +K  +IEYIPLRDYYHRH++S+FWEL+DI+ FGNN +FR
Sbjct: 302 VNPIGRWYKKWFYTHVEDLINKKHESIEYIPLRDYYHRHSKSIFWELRDIVPFGNNVLFR 361

Query: 532 YLFGWLMPPEVSLLKLTQPEAVTKLYNKAHVIQDMLIPIELLEKAIAFFHDEFEVYPIWL 353
           YL  W+ PP+++ LK T P  + KLY+++HV+QDML+P++ LE+ I  FH E E+YP+WL
Sbjct: 362 YLMAWMCPPKIAFLKATTPNVLRKLYDRSHVLQDMLVPLDKLEECIDLFHKEVEIYPMWL 421

Query: 352 CPFKIFNNPGQLKIKPGEESQMFVDIGVYGVPKAKGFETIASTRHVESFVIQNQGFQMLY 173
           CPF + + PG +K++     +M+VD+G YGV    G+    +TR +ESFV    GFQM Y
Sbjct: 422 CPFYLKSQPGLMKLR-NATHKMYVDVGAYGVTSKDGYHHERTTRRLESFVRSVNGFQMTY 480

Query: 172 ADTY 161
           AD Y
Sbjct: 481 ADIY 484


>AL034489-1|CAA22461.1|  538|Caenorhabditis elegans Hypothetical
           protein Y7A5A.1 protein.
          Length = 538

 Score =  125 bits (301), Expect = 4e-29
 Identities = 68/203 (33%), Positives = 111/203 (54%), Gaps = 15/203 (7%)
 Frame = -1

Query: 715 KLNPIGVWHAEWFFKQVEKHLKRKRTAIEYIPLRDYYHRHTRSLFWELQDIISFGNNFIF 536
           K+N +  ++  WF+K VE  LK+     EYIPL  Y  RH R++FW ++ +I FGN+ +F
Sbjct: 287 KVNDVCWFYKPWFYKHVETFLKKGGE--EYIPLESYLLRHNRAIFWVVESMIPFGNHPVF 344

Query: 535 RYLFGWLMPPEVSLLKLTQPEAVTKLYNKAHVIQDMLIPIELLEKAIAFFHDEFEVYPIW 356
           R   GWL PP+ + LK T  +AV ++     V QD+++P++ L++ +      F+ YP+ 
Sbjct: 345 RAFLGWLCPPKPAFLKFTTTQAVREMTFAKQVFQDIVMPLDTLKEQVDTAVKLFDTYPLL 404

Query: 355 LCPFKIFNN-----PGQL------KIKPGEESQMFVDIGVYGVP----KAKGFETIASTR 221
           + P +I+++      GQL      ++ PG    MF D+GVYG P    + + +    + R
Sbjct: 405 VYPCRIYDHKGGAPQGQLRAPPKSRLVPGTNYSMFNDLGVYGTPGQVERREPYNPTHAMR 464

Query: 220 HVESFVIQNQGFQMLYADTYTXE 152
            +E F     G+  LYAD +  E
Sbjct: 465 AMEKFTRDVGGYSFLYADIFMSE 487


>Z81479-6|CAB03938.1|  411|Caenorhabditis elegans Hypothetical
           protein C34F6.7 protein.
          Length = 411

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 22/68 (32%), Positives = 29/68 (42%), Gaps = 2/68 (2%)
 Frame = -1

Query: 526 FGWLMPPEVSL--LKLTQPEAVTKLYNKAHVIQDMLIPIELLEKAIAFFHDEFEVYPIWL 353
           F  + PPE  L  L LT  +  T LYN      D    +E   K +AFFH     YP  +
Sbjct: 46  FALVFPPEELLDGLGLTLFDLFTILYNSRQ--HDF---VEYAAKRVAFFHAFVAFYPCVI 100

Query: 352 CPFKIFNN 329
             + +  N
Sbjct: 101 AAYFVHGN 108


>AC006680-10|AAK72297.2|  335|Caenorhabditis elegans Seven tm
           receptor protein 41 protein.
          Length = 335

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 16/54 (29%), Positives = 28/54 (51%)
 Frame = -1

Query: 556 FGNNFIFRYLFGWLMPPEVSLLKLTQPEAVTKLYNKAHVIQDMLIPIELLEKAI 395
           FG  F   Y F + +   +S+L LT P+  T  Y +A +I+   + IE + + +
Sbjct: 133 FGVIFWILYPFLYGVVNSLSILFLTSPDGFTDDYLRAEIIEKYELDIENIARLV 186


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,150,463
Number of Sequences: 27780
Number of extensions: 338238
Number of successful extensions: 877
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 850
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 874
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1666201324
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)