Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_pT_D03
         (711 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_02_1023 + 13265179-13265330,13265526-13265637,13265752-132660...    29   4.8  

>03_02_1023 + 13265179-13265330,13265526-13265637,13265752-13266048,
            13266361-13266623,13267637-13267847,13268420-13268590,
            13268671-13268748,13269275-13269520,13269763-13271868,
            13272122-13273904,13274113-13274216,13274752-13275108,
            13275210-13275328,13276175-13276436,13276669-13276893,
            13277075-13277214,13278087-13278159,13278431-13278532,
            13278647-13279018,13279183-13279230,13279516-13279900,
            13280440-13280558
          Length = 2574

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = +2

Query: 353  LHTDVYVIRVYRLNAMFKMHWNY 421
            L  D+Y +++Y   AM++M W Y
Sbjct: 2232 LLVDIYPLKIYLTEAMYRMMWGY 2254


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,040,499
Number of Sequences: 37544
Number of extensions: 247171
Number of successful extensions: 367
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 363
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 367
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1839213168
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)