Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_pT_D01
         (741 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    23   2.0  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    23   2.0  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   6.0  
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    22   6.0  

>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 17/79 (21%), Positives = 33/79 (41%)
 Frame = -2

Query: 689 IAIAFPSPKILNLNVFDKLLTVHTFEGLLKNLEDADFTLVSEDGEKFRVHKAILAAHSDV 510
           ++ +FP  K++   +F  + T+   EGL          L        R    +L   +  
Sbjct: 28  LSCSFPKKKLVYCIIFGAIATLTCIEGLRDCPRKYSTPLAKITTILQRYCSVLLVFLTYF 87

Query: 509 FKAMFREETIESQKQLVKL 453
           F  +FR++ + + K L K+
Sbjct: 88  FNILFRKKLLNAVKILSKI 106


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 17/79 (21%), Positives = 33/79 (41%)
 Frame = -2

Query: 689 IAIAFPSPKILNLNVFDKLLTVHTFEGLLKNLEDADFTLVSEDGEKFRVHKAILAAHSDV 510
           ++ +FP  K++   +F  + T+   EGL          L        R    +L   +  
Sbjct: 24  LSCSFPKKKLVYCIIFGAIATLTCIEGLRDCPRKYSTPLAKITTILQRYCSVLLVFLTYF 83

Query: 509 FKAMFREETIESQKQLVKL 453
           F  +FR++ + + K L K+
Sbjct: 84  FNILFRKKLLNAVKILSKI 102


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +2

Query: 248 YLPLLIYRMHFLL 286
           Y P +I+ +HFLL
Sbjct: 86  YCPFIIFTVHFLL 98



 Score = 21.8 bits (44), Expect = 6.0
 Identities = 11/37 (29%), Positives = 17/37 (45%)
 Frame = +3

Query: 414 FYQVFQIFCSHVYKFYQLLLTLNCLFPEHSFEYITMC 524
           FY +  +FC     F   LL L C++  +    I +C
Sbjct: 261 FYYMHLLFCCAFIIFTMHLLFLLCIYYFYCALIILLC 297


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = +1

Query: 400 PVYRYSIKYFKSSAVTSTSFTNCF 471
           P YR + + +++S   S SF +CF
Sbjct: 175 PFYRQNQQRWQNSIRHSLSFNDCF 198


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 161,721
Number of Sequences: 336
Number of extensions: 3467
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19884055
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)