Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_pT_D01
         (741 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ441131-5|CAD29634.1|  574|Anopheles gambiae putative Na+ chann...    26   1.4  
AJ439398-4|CAD28127.1|  572|Anopheles gambiae putative sodium ch...    26   1.4  
AF364132-2|AAL35509.1|  411|Anopheles gambiae putative odorant r...    25   1.9  
AY062432-1|AAL47188.1|  391|Anopheles gambiae putative odorant r...    25   3.2  
EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    24   5.7  

>AJ441131-5|CAD29634.1|  574|Anopheles gambiae putative Na+ channel
           protein.
          Length = 574

 Score = 25.8 bits (54), Expect = 1.4
 Identities = 11/35 (31%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
 Frame = -1

Query: 453 CRRDCRRFEILDRIS--IYWLPKKFRKCRLCQPAN 355
           C  +C    IL+     +Y+LPK +   ++C  AN
Sbjct: 366 CELECEAKLILENCGCVLYYLPKLYEDTKICSRAN 400


>AJ439398-4|CAD28127.1|  572|Anopheles gambiae putative sodium
           channel protein.
          Length = 572

 Score = 25.8 bits (54), Expect = 1.4
 Identities = 11/35 (31%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
 Frame = -1

Query: 453 CRRDCRRFEILDRIS--IYWLPKKFRKCRLCQPAN 355
           C  +C    IL+     +Y+LPK +   ++C  AN
Sbjct: 366 CELECEAKLILENCGCVLYYLPKLYEDTKICSRAN 400


>AF364132-2|AAL35509.1|  411|Anopheles gambiae putative odorant
           receptor Or3 protein.
          Length = 411

 Score = 25.4 bits (53), Expect = 1.9
 Identities = 28/130 (21%), Positives = 54/130 (41%), Gaps = 6/130 (4%)
 Frame = -2

Query: 710 MKNKSLYIAIAFPSPKILNLNVFDKLLTVHT----FEGLLK--NLEDADFTLVSEDGEKF 549
           M + + Y+AI +P+   L      KLLT+ +       +LK   L       V++D  + 
Sbjct: 200 MAHYTFYVAIMWPTIYTLGFTGGTKLLTIFSNVKYCSAMLKLVALRIHCLARVAQDRAEK 259

Query: 548 RVHKAILAAHSDVFKAMFREETIESQKQLVKLVDVTAEDLKYLIEYLYTGYLKNLENADF 369
            +++ I++ H  V   +F  ET       V+ +  T      ++    TG+   + N   
Sbjct: 260 ELNE-IISMHQRVLNCVFLLETTFRWVFFVQFIQCTMIWCSLILYIAVTGFSSTVANVCV 318

Query: 368 VNLLMIADRY 339
             +L+  + Y
Sbjct: 319 QIILVTVETY 328


>AY062432-1|AAL47188.1|  391|Anopheles gambiae putative odorant
           receptor Or5 protein.
          Length = 391

 Score = 24.6 bits (51), Expect = 3.2
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = -2

Query: 695 LYIAIAFPSPKILNLNVFDKLLTVHTF 615
           LY+A+   S K  N+ V   LLTV T+
Sbjct: 283 LYVAVTGLSTKAANVGVLFILLTVETY 309


>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
            channel alpha1 subunit protein.
          Length = 1893

 Score = 23.8 bits (49), Expect = 5.7
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = -2

Query: 332  KGLRHLSQCALAEQLTIENAFYILAM 255
            KGL+H+ QC +    TI N   +  +
Sbjct: 969  KGLKHVVQCVIVAVKTIGNIVLVTCL 994


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 706,387
Number of Sequences: 2352
Number of extensions: 13734
Number of successful extensions: 33
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 76091949
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)