Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_pT_C23
         (416 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript...    23   5.9  
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    22   7.8  
AF532982-1|AAQ10289.1|  459|Anopheles gambiae putative RNA methy...    22   7.8  

>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1022

 Score = 22.6 bits (46), Expect = 5.9
 Identities = 11/40 (27%), Positives = 18/40 (45%)
 Frame = -2

Query: 127 CHKCVKQRIVRAFLIEEQKIVKVLQGTTGEH*VGKEGYKV 8
           CH+ +  R++ AF         V+ G    H +  E Y+V
Sbjct: 794 CHRPLVNRVISAFRSTSHDAACVIAGMMPLHILIDEDYRV 833


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
           channel alpha subunitprotein.
          Length = 2139

 Score = 22.2 bits (45), Expect = 7.8
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -2

Query: 148 RVYGGVLCHKCVKQ 107
           ++Y GVL  KC+K+
Sbjct: 290 QIYMGVLTQKCIKE 303


>AF532982-1|AAQ10289.1|  459|Anopheles gambiae putative RNA
           methylase protein.
          Length = 459

 Score = 22.2 bits (45), Expect = 7.8
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +2

Query: 185 FSRSSWLDTTEFALALTTP 241
           FSRS W D+  F   +T P
Sbjct: 293 FSRSIWADSIVFDSIITDP 311


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 408,871
Number of Sequences: 2352
Number of extensions: 7541
Number of successful extensions: 9
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 34205040
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)