Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_pT_C20
         (694 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_06_0707 - 35655084-35655215,35656088-35656229,35656358-356564...    96   3e-20
08_01_0996 + 10089800-10090149,10090426-10090483,10092922-100931...    80   1e-15
12_02_0232 - 16015174-16015244,16015861-16016671,16018412-16018861     28   8.1  

>03_06_0707 -
           35655084-35655215,35656088-35656229,35656358-35656485,
           35656852-35656944,35657183-35657252,35657324-35657445,
           35658143-35658265,35659453-35659710,35659995-35660074,
           35660244-35660389,35660773-35660906,35661001-35661137,
           35663013-35663135,35663521-35663590,35663925-35664050,
           35664166-35664393
          Length = 703

 Score = 95.9 bits (228), Expect = 3e-20
 Identities = 61/154 (39%), Positives = 89/154 (57%), Gaps = 16/154 (10%)
 Frame = -3

Query: 692 SCGGVLDSTXEELCDRPLGASDYLVISKTFHTVFIRNLPQLSISKHRSQLRRFITLIDTL 513
           SC GV     E LC RP+GA+DY+ I++ +HT+FI ++P +S+ K R + RRFITLID L
Sbjct: 523 SCNGVARFDFEYLCGRPVGAADYIAIARNYHTIFISDIPAMSM-KIRDKARRFITLIDEL 581

Query: 512 YDNRVRVVIAADSEPKNLMK---------LDETEF-GDADRA-LMDDLKI-----TKDSE 381
           Y++  R+V  A S   +L +         L+  +F G+A+ A L  D+          S 
Sbjct: 582 YNHHCRLVCLAASSIDDLFQGTDEGPLFDLESFQFEGEAEGAKLRRDVLAEGNVGAAPSP 641

Query: 380 DAKATIFTGEEEMFACDRCLSRIMEMQTDEYWEK 279
                I +G+EEMFA  R +SR++EMQT  Y E+
Sbjct: 642 TGLVAILSGQEEMFAFRRAISRLIEMQTSLYLER 675


>08_01_0996 +
           10089800-10090149,10090426-10090483,10092922-10093126,
           10093201-10093280,10093377-10093477,10093566-10093691,
           10094099-10094101,10094736-10094763,10094875-10094961,
           10095187-10095273,10095346-10095411,10095511-10095603,
           10095688-10095744,10095834-10095959,10096049-10096139,
           10096233-10096321,10096951-10097141,10097224-10097322,
           10098814-10098829
          Length = 650

 Score = 80.2 bits (189), Expect = 1e-15
 Identities = 45/134 (33%), Positives = 77/134 (57%)
 Frame = -3

Query: 683 GVLDSTXEELCDRPLGASDYLVISKTFHTVFIRNLPQLSISKHRSQLRRFITLIDTLYDN 504
           G+     E+LCDRPLGA+DY  + K FHT+ +  +P+   S++R+   RF+TL+D +Y+N
Sbjct: 496 GIAYFPFEDLCDRPLGAADYFGLFKKFHTLALDGIPKFG-SQNRTAAYRFVTLVDVMYEN 554

Query: 503 RVRVVIAADSEPKNLMKLDETEFGDADRALMDDLKITKDSEDAKATIFTGEEEMFACDRC 324
           + R++  AD+ P  L + +     +A R +      ++ ++D    +    E  FA DR 
Sbjct: 555 KARLLCTADAAPIELFE-NIVTVAEA-RKISPRSSRSQKTDDPDLCV--DNELGFAKDRT 610

Query: 323 LSRIMEMQTDEYWE 282
           +SR+ E+ + EY E
Sbjct: 611 ISRLTEINSREYLE 624


>12_02_0232 - 16015174-16015244,16015861-16016671,16018412-16018861
          Length = 443

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 15/53 (28%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
 Frame = -3

Query: 482 ADSEPKNLMKLDETEFGDADRALMDDLKITKDSEDAKATIFT-GEEEMFACDR 327
           A S P N+ +  E  F + +    DD+ +T  +E+  +  FT  + +M A  R
Sbjct: 205 ATSLPPNIKEEQEKLFDELENTTCDDIMVTMPAENMVSEYFTISQRDMIALRR 257


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,633,711
Number of Sequences: 37544
Number of extensions: 260969
Number of successful extensions: 466
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 458
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 463
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1768474200
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)