Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_pT_C13
         (813 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC117259-1|AAI17260.1| 1581|Homo sapiens LOC200383 protein protein.    32   2.1  
AB051484-1|BAB21788.2| 2182|Homo sapiens KIAA1697 protein protein.     32   2.1  
AY585745-1|AAT40745.1| 2472|Homo sapiens Rap1 interacting factor...    30   8.7  
AY584066-1|AAS94233.1| 2472|Homo sapiens telomeric protein RIF1 ...    30   8.7  
AK022932-1|BAB14313.1|  838|Homo sapiens protein ( Homo sapiens ...    30   8.7  
AK001461-1|BAA91705.1|  852|Homo sapiens protein ( Homo sapiens ...    30   8.7  

>BC117259-1|AAI17260.1| 1581|Homo sapiens LOC200383 protein protein.
          Length = 1581

 Score = 32.3 bits (70), Expect = 2.1
 Identities = 12/25 (48%), Positives = 18/25 (72%)
 Frame = -2

Query: 650 NCHPEILSKVRQYYNVPDFLPSDAE 576
           N  P+IL+K+++Y N PDF+P   E
Sbjct: 271 NIKPQILAKLQKYINNPDFVPEKVE 295


>AB051484-1|BAB21788.2| 2182|Homo sapiens KIAA1697 protein protein.
          Length = 2182

 Score = 32.3 bits (70), Expect = 2.1
 Identities = 12/25 (48%), Positives = 18/25 (72%)
 Frame = -2

Query: 650 NCHPEILSKVRQYYNVPDFLPSDAE 576
           N  P+IL+K+++Y N PDF+P   E
Sbjct: 872 NIKPQILAKLQKYINNPDFVPEKVE 896


>AY585745-1|AAT40745.1| 2472|Homo sapiens Rap1 interacting factor 1
            protein.
          Length = 2472

 Score = 30.3 bits (65), Expect = 8.7
 Identities = 28/104 (26%), Positives = 48/104 (46%), Gaps = 4/104 (3%)
 Frame = +1

Query: 202  NFISIACIILTVTIKIDKLFVILVKRLFVSNLSDT*PYSDWTVKENSPAGILVE*YQMRV 381
            N + +  II  +T+ +D +        +   +      SDW+ K+N P G L   +++ V
Sbjct: 749  NLLFVDRIIYIITVMVDCIDFSPYNIKYQPKVKSPQRPSDWSKKKNEPLGKLTSLFKLIV 808

Query: 382  ----SKNTMSPFST*NSKPLQT*SHSGTGAIDHILLPLT*PCHI 501
                S +T+S F   +S  L T  +S TG I  +L  ++ P  I
Sbjct: 809  KVIYSFHTLS-FKEAHSDTLFTIGNSITGIISSVLGHISLPSMI 851


>AY584066-1|AAS94233.1| 2472|Homo sapiens telomeric protein RIF1
            protein.
          Length = 2472

 Score = 30.3 bits (65), Expect = 8.7
 Identities = 28/104 (26%), Positives = 48/104 (46%), Gaps = 4/104 (3%)
 Frame = +1

Query: 202  NFISIACIILTVTIKIDKLFVILVKRLFVSNLSDT*PYSDWTVKENSPAGILVE*YQMRV 381
            N + +  II  +T+ +D +        +   +      SDW+ K+N P G L   +++ V
Sbjct: 749  NLLFVDRIIYIITVMVDCIDFSPYNIKYQPKVKSPQRPSDWSKKKNEPLGKLTSLFKLIV 808

Query: 382  ----SKNTMSPFST*NSKPLQT*SHSGTGAIDHILLPLT*PCHI 501
                S +T+S F   +S  L T  +S TG I  +L  ++ P  I
Sbjct: 809  KVIYSFHTLS-FKEAHSDTLFTIGNSITGIISSVLGHISLPSMI 851


>AK022932-1|BAB14313.1|  838|Homo sapiens protein ( Homo sapiens
           cDNA FLJ12870 fis, clone NT2RP2003727. ).
          Length = 838

 Score = 30.3 bits (65), Expect = 8.7
 Identities = 28/104 (26%), Positives = 48/104 (46%), Gaps = 4/104 (3%)
 Frame = +1

Query: 202 NFISIACIILTVTIKIDKLFVILVKRLFVSNLSDT*PYSDWTVKENSPAGILVE*YQMRV 381
           N + +  II  +T+ +D +        +   +      SDW+ K+N P G L   +++ V
Sbjct: 573 NLLFVDRIIYIITVMVDCIDFSPYNIKYQPKVKSPQRPSDWSKKKNEPLGKLTSLFKLIV 632

Query: 382 ----SKNTMSPFST*NSKPLQT*SHSGTGAIDHILLPLT*PCHI 501
               S +T+S F   +S  L T  +S TG I  +L  ++ P  I
Sbjct: 633 KVIYSFHTLS-FKEAHSDTLFTIGNSITGIISSVLGHISLPSMI 675


>AK001461-1|BAA91705.1|  852|Homo sapiens protein ( Homo sapiens
           cDNA FLJ10599 fis, clone NT2RP2004959. ).
          Length = 852

 Score = 30.3 bits (65), Expect = 8.7
 Identities = 28/104 (26%), Positives = 48/104 (46%), Gaps = 4/104 (3%)
 Frame = +1

Query: 202 NFISIACIILTVTIKIDKLFVILVKRLFVSNLSDT*PYSDWTVKENSPAGILVE*YQMRV 381
           N + +  II  +T+ +D +        +   +      SDW+ K+N P G L   +++ V
Sbjct: 102 NLLFVDRIIYIITVMVDCIDFSPYNIKYQPKVKSPQRPSDWSKKKNEPLGKLTSLFKLIV 161

Query: 382 ----SKNTMSPFST*NSKPLQT*SHSGTGAIDHILLPLT*PCHI 501
               S +T+S F   +S  L T  +S TG I  +L  ++ P  I
Sbjct: 162 KVIYSFHTLS-FKEAHSDTLFTIGNSITGIISSVLGHISLPSMI 204


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 115,965,921
Number of Sequences: 237096
Number of extensions: 2615004
Number of successful extensions: 3830
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3763
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3830
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10092110758
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)