Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_pT_C13
         (813 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118903-1|AAM50763.1|  330|Drosophila melanogaster LD14533p pro...   210   1e-54
AE014296-237|AAF47483.3|  330|Drosophila melanogaster CG2211-PA ...   210   1e-54
AE014297-2357|AAF55421.2|  248|Drosophila melanogaster CG14331-P...   151   1e-36

>AY118903-1|AAM50763.1|  330|Drosophila melanogaster LD14533p
           protein.
          Length = 330

 Score =  210 bits (514), Expect = 1e-54
 Identities = 97/167 (58%), Positives = 115/167 (68%)
 Frame = -2

Query: 809 LYEETGGSYESLDDGCQFLNFXTDLFSLKEVFNMPEERVKNEPGQKPWYVGWGNCHPEIL 630
           LYE   G+   +D  CQFL+F +DL SLK VF+M  ER     G  PW+VGW  C P +L
Sbjct: 168 LYESVPGA---MDSDCQFLHFNSDLKSLKHVFSMSAERSNLTQGV-PWFVGWSVCQPAVL 223

Query: 629 SKVRQYYNVPDFLPSDAEFSGTENIFFGYEIGAVMHLDYISRLMWQGQVSGNKIWSIAPV 450
           +++R+ Y  P FLP DAE   T+ I  GYE GAVMHLDYI RL+WQ Q+SGNK W +AP 
Sbjct: 224 AELRKLYPRPHFLPFDAEMPHTDFILMGYEQGAVMHLDYIPRLLWQAQLSGNKTWFLAPA 283

Query: 449 PECDHVCNGLEFYVEKGDIVFLDTRIWYHSTRIPAGEFSLTVQSEYG 309
           PECDH C    FYVE GD V +DTRIWYH+  IP G+FSLTVQSEYG
Sbjct: 284 PECDHQCQPFSFYVEPGDAVLVDTRIWYHANSIPKGQFSLTVQSEYG 330


>AE014296-237|AAF47483.3|  330|Drosophila melanogaster CG2211-PA
           protein.
          Length = 330

 Score =  210 bits (514), Expect = 1e-54
 Identities = 97/167 (58%), Positives = 115/167 (68%)
 Frame = -2

Query: 809 LYEETGGSYESLDDGCQFLNFXTDLFSLKEVFNMPEERVKNEPGQKPWYVGWGNCHPEIL 630
           LYE   G+   +D  CQFL+F +DL SLK VF+M  ER     G  PW+VGW  C P +L
Sbjct: 168 LYESVPGA---MDSDCQFLHFNSDLKSLKHVFSMSAERSNLTQGV-PWFVGWSVCQPAVL 223

Query: 629 SKVRQYYNVPDFLPSDAEFSGTENIFFGYEIGAVMHLDYISRLMWQGQVSGNKIWSIAPV 450
           +++R+ Y  P FLP DAE   T+ I  GYE GAVMHLDYI RL+WQ Q+SGNK W +AP 
Sbjct: 224 AELRKLYPRPHFLPFDAEMPHTDFILMGYEQGAVMHLDYIPRLLWQAQLSGNKTWFLAPA 283

Query: 449 PECDHVCNGLEFYVEKGDIVFLDTRIWYHSTRIPAGEFSLTVQSEYG 309
           PECDH C    FYVE GD V +DTRIWYH+  IP G+FSLTVQSEYG
Sbjct: 284 PECDHQCQPFSFYVEPGDAVLVDTRIWYHANSIPKGQFSLTVQSEYG 330


>AE014297-2357|AAF55421.2|  248|Drosophila melanogaster CG14331-PA
           protein.
          Length = 248

 Score =  151 bits (365), Expect = 1e-36
 Identities = 63/152 (41%), Positives = 92/152 (60%), Gaps = 1/152 (0%)
 Frame = -2

Query: 764 CQFLNFXTDLFSLKEVFNMPEERVKNEPGQKPWYVGWGNCHPEILSKVRQYYNVPDFLPS 585
           CQFL + T    + +  +MPE+RV+ +PG++PWY GW NCH E   + R++Y  P FLP 
Sbjct: 96  CQFLPYKTGFLDIYDALDMPEDRVELKPGEQPWYFGWSNCHAETAEEFRRHYGRPYFLPE 155

Query: 584 DAEFSGTENIFFGYE-IGAVMHLDYISRLMWQGQVSGNKIWSIAPVPECDHVCNGLEFYV 408
            +E +  +  F G   +GA MH+D +    WQ Q++G+K W + P PEC   C   +  V
Sbjct: 156 GSENNAVDWFFIGLSGLGAQMHIDNVRLPSWQAQLAGSKRWLLVPPPECYLQCRRFDVVV 215

Query: 407 EKGDIVFLDTRIWYHSTRIPAGEFSLTVQSEY 312
           ++GDI+ LDT  WYH T +  G  SLT+ +EY
Sbjct: 216 QQGDIIVLDTNKWYHQTFVQPGAISLTIGAEY 247


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,567,384
Number of Sequences: 53049
Number of extensions: 737466
Number of successful extensions: 1397
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1345
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1394
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3818998872
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)