Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_pT_C07
         (376 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_02_1547 + 27795664-27795674,27795743-27795892,27796182-277979...    27   4.8  
05_01_0358 + 2808627-2809847                                           27   4.8  

>08_02_1547 + 27795664-27795674,27795743-27795892,27796182-27797906,
            27799447-27799546,27799657-27800268,27800399-27800521,
            27800905-27801039,27801108-27801209,27801716-27801778,
            27801854-27802045,27802121-27802258,27802632-27802694,
            27803068-27803466
          Length = 1270

 Score = 27.1 bits (57), Expect = 4.8
 Identities = 12/34 (35%), Positives = 19/34 (55%)
 Frame = -3

Query: 107  NGSVICQLAAAAGPRVRRRSVSARQCAHSLTIRS 6
            +G  +  LA  +GP + RR  + RQ A   T+R+
Sbjct: 1150 DGKPLSWLATTSGPGLYRREANRRQSALDFTVRT 1183


>05_01_0358 + 2808627-2809847
          Length = 406

 Score = 27.1 bits (57), Expect = 4.8
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = +1

Query: 7  LRIVKLCAHWRAETLRLRTRGP 72
          L I ++CAHWRA T  L    P
Sbjct: 34 LHIHQVCAHWRASTAPLAAARP 55


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,450,322
Number of Sequences: 37544
Number of extensions: 96649
Number of successful extensions: 234
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 231
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 234
length of database: 14,793,348
effective HSP length: 74
effective length of database: 12,015,092
effective search space used: 600754600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)