Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_pT_C04
         (688 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF364132-1|AAL35508.1|  397|Anopheles gambiae putative odorant r...    24   5.2  
AB090815-1|BAC57905.1|  492|Anopheles gambiae gag-like protein p...    24   5.2  
Y17717-1|CAA76832.1|  101|Anopheles gambiae cE5 protein protein.       23   9.0  

>AF364132-1|AAL35508.1|  397|Anopheles gambiae putative odorant
           receptor Or4 protein.
          Length = 397

 Score = 23.8 bits (49), Expect = 5.2
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = +3

Query: 480 FLPFLQELKSMLVMHVPHSW 539
           F  F+QELKS+ V+   HS+
Sbjct: 92  FQAFIQELKSLSVLVCSHSY 111


>AB090815-1|BAC57905.1|  492|Anopheles gambiae gag-like protein
           protein.
          Length = 492

 Score = 23.8 bits (49), Expect = 5.2
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = -2

Query: 633 PFGILVRNVRCIKCHKWGHINTD 565
           P  I +   RC KC + GH + D
Sbjct: 408 PVKIQIPKRRCFKCWETGHFSRD 430


>Y17717-1|CAA76832.1|  101|Anopheles gambiae cE5 protein protein.
          Length = 101

 Score = 23.0 bits (47), Expect = 9.0
 Identities = 10/41 (24%), Positives = 21/41 (51%)
 Frame = -2

Query: 531 EARALQASTSTPEEKEEKPDVPTLMQQMRDTGLIMKPGALP 409
           +  +L+  +S+P +  E+   P+L+++  D      PG  P
Sbjct: 39  DEESLKPHSSSPSDDGEEEFDPSLLEEHADAPTARDPGRNP 79


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 539,032
Number of Sequences: 2352
Number of extensions: 8847
Number of successful extensions: 22
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 69413730
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)