Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P04_pT_C04
(688 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC046098-1|AAH46098.1| 450|Homo sapiens CBF1 interacting corepr... 96 1e-19
BC038987-1|AAH38987.1| 289|Homo sapiens Similar to RIKEN cDNA 1... 96 1e-19
BC031018-1|AAH31018.1| 426|Homo sapiens CIR protein protein. 96 1e-19
BC021175-1|AAH21175.1| 227|Homo sapiens CIR protein protein. 96 1e-19
AF098297-1|AAD05243.1| 450|Homo sapiens CBF1 interacting corepr... 96 1e-19
AC018470-1|AAY24216.1| 450|Homo sapiens unknown protein. 96 1e-19
BC015040-1|AAH15040.1| 202|Homo sapiens CIR protein protein. 90 8e-18
U03644-1|AAA17853.1| 451|Homo sapiens recepin protein. 65 2e-10
BC025928-1|AAH25928.2| 221|Homo sapiens retinitis pigmentosa 9 ... 31 2.9
>BC046098-1|AAH46098.1| 450|Homo sapiens CBF1 interacting
corepressor protein.
Length = 450
Score = 95.9 bits (228), Expect = 1e-19
Identities = 45/90 (50%), Positives = 57/90 (63%)
Frame = -2
Query: 681 APRESYCKGDNEIRDQPFGILVRNVRCIKCHKWGHINTDKECTMYTLSMSEARALQASTS 502
APRE Y K D IRDQPFGI VRNVRCIKCHKWGH+NTD+EC ++ LS A ++ S
Sbjct: 102 APREKYAKDDMNIRDQPFGIQVRNVRCIKCHKWGHVNTDRECPLFGLSGINASSVPTDGS 161
Query: 501 TPEEKEEKPDVPTLMQQMRDTGLIMKPGAL 412
P + L+ +MR++G +K L
Sbjct: 162 GPSMHPSE-----LIAEMRNSGFALKRNVL 186
>BC038987-1|AAH38987.1| 289|Homo sapiens Similar to RIKEN cDNA
1700023B02 gene protein.
Length = 289
Score = 95.9 bits (228), Expect = 1e-19
Identities = 45/90 (50%), Positives = 57/90 (63%)
Frame = -2
Query: 681 APRESYCKGDNEIRDQPFGILVRNVRCIKCHKWGHINTDKECTMYTLSMSEARALQASTS 502
APRE Y K D IRDQPFGI VRNVRCIKCHKWGH+NTD+EC ++ LS A ++ S
Sbjct: 102 APREKYAKDDMNIRDQPFGIQVRNVRCIKCHKWGHVNTDRECPLFGLSGINASSVPTDGS 161
Query: 501 TPEEKEEKPDVPTLMQQMRDTGLIMKPGAL 412
P + L+ +MR++G +K L
Sbjct: 162 GPSMHPSE-----LIAEMRNSGFALKRNVL 186
>BC031018-1|AAH31018.1| 426|Homo sapiens CIR protein protein.
Length = 426
Score = 95.9 bits (228), Expect = 1e-19
Identities = 45/90 (50%), Positives = 57/90 (63%)
Frame = -2
Query: 681 APRESYCKGDNEIRDQPFGILVRNVRCIKCHKWGHINTDKECTMYTLSMSEARALQASTS 502
APRE Y K D IRDQPFGI VRNVRCIKCHKWGH+NTD+EC ++ LS A ++ S
Sbjct: 102 APREKYAKDDMNIRDQPFGIQVRNVRCIKCHKWGHVNTDRECPLFGLSGINASSVPTDGS 161
Query: 501 TPEEKEEKPDVPTLMQQMRDTGLIMKPGAL 412
P + L+ +MR++G +K L
Sbjct: 162 GPSMHPSE-----LIAEMRNSGFALKRNVL 186
>BC021175-1|AAH21175.1| 227|Homo sapiens CIR protein protein.
Length = 227
Score = 95.9 bits (228), Expect = 1e-19
Identities = 45/90 (50%), Positives = 57/90 (63%)
Frame = -2
Query: 681 APRESYCKGDNEIRDQPFGILVRNVRCIKCHKWGHINTDKECTMYTLSMSEARALQASTS 502
APRE Y K D IRDQPFGI VRNVRCIKCHKWGH+NTD+EC ++ LS A ++ S
Sbjct: 102 APREKYAKDDMNIRDQPFGIQVRNVRCIKCHKWGHVNTDRECPLFGLSGINASSVPTDGS 161
Query: 501 TPEEKEEKPDVPTLMQQMRDTGLIMKPGAL 412
P + L+ +MR++G +K L
Sbjct: 162 GPSMHPSE-----LIAEMRNSGFALKRNVL 186
>AF098297-1|AAD05243.1| 450|Homo sapiens CBF1 interacting
corepressor CIR protein.
Length = 450
Score = 95.9 bits (228), Expect = 1e-19
Identities = 45/90 (50%), Positives = 57/90 (63%)
Frame = -2
Query: 681 APRESYCKGDNEIRDQPFGILVRNVRCIKCHKWGHINTDKECTMYTLSMSEARALQASTS 502
APRE Y K D IRDQPFGI VRNVRCIKCHKWGH+NTD+EC ++ LS A ++ S
Sbjct: 102 APREKYAKDDMSIRDQPFGIQVRNVRCIKCHKWGHVNTDRECPLFGLSGINASSVPTDGS 161
Query: 501 TPEEKEEKPDVPTLMQQMRDTGLIMKPGAL 412
P + L+ +MR++G +K L
Sbjct: 162 GPSMHPSE-----LIAEMRNSGFALKRNVL 186
>AC018470-1|AAY24216.1| 450|Homo sapiens unknown protein.
Length = 450
Score = 95.9 bits (228), Expect = 1e-19
Identities = 45/90 (50%), Positives = 57/90 (63%)
Frame = -2
Query: 681 APRESYCKGDNEIRDQPFGILVRNVRCIKCHKWGHINTDKECTMYTLSMSEARALQASTS 502
APRE Y K D IRDQPFGI VRNVRCIKCHKWGH+NTD+EC ++ LS A ++ S
Sbjct: 102 APREKYAKDDMNIRDQPFGIQVRNVRCIKCHKWGHVNTDRECPLFGLSGINASSVPTDGS 161
Query: 501 TPEEKEEKPDVPTLMQQMRDTGLIMKPGAL 412
P + L+ +MR++G +K L
Sbjct: 162 GPSMHPSE-----LIAEMRNSGFALKRNVL 186
>BC015040-1|AAH15040.1| 202|Homo sapiens CIR protein protein.
Length = 202
Score = 89.8 bits (213), Expect = 8e-18
Identities = 38/60 (63%), Positives = 44/60 (73%)
Frame = -2
Query: 681 APRESYCKGDNEIRDQPFGILVRNVRCIKCHKWGHINTDKECTMYTLSMSEARALQASTS 502
APRE Y K D IRDQPFGI VRNVRCIKCHKWGH+NTD+EC ++ LS A ++ S
Sbjct: 102 APREKYAKDDMNIRDQPFGIQVRNVRCIKCHKWGHVNTDRECPLFGLSGINASSVPTDGS 161
>U03644-1|AAA17853.1| 451|Homo sapiens recepin protein.
Length = 451
Score = 65.3 bits (152), Expect = 2e-10
Identities = 27/33 (81%), Positives = 27/33 (81%)
Frame = -2
Query: 681 APRESYCKGDNEIRDQPFGILVRNVRCIKCHKW 583
APRE Y K D IRDQPFGI VRNVRCIKCHKW
Sbjct: 102 APREKYAKDDMNIRDQPFGIQVRNVRCIKCHKW 134
>BC025928-1|AAH25928.2| 221|Homo sapiens retinitis pigmentosa 9
(autosomal dominant) protein.
Length = 221
Score = 31.5 bits (68), Expect = 2.9
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = -2
Query: 633 PFGILVRNVRCIKCHKWGHINTDKECTMY 547
P G V+ ++C +C ++GH DKEC +
Sbjct: 95 PLGKEVKVMQCWRCKRYGHRTGDKECPFF 123
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 71,689,272
Number of Sequences: 237096
Number of extensions: 1188399
Number of successful extensions: 2750
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2625
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2743
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7839245960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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