Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_pT_C01
         (673 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    24   0.99 
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    23   3.0  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    23   3.0  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    22   4.0  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    22   4.0  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    21   6.9  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 24.2 bits (50), Expect = 0.99
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = -1

Query: 625 CKEYYTSNRIIDCLIQILFTYTLFYLVKIFY 533
           C  Y+    ++ C   I+FT  L +L+ I+Y
Sbjct: 257 CIYYFYYMHLLFCCAFIIFTMHLLFLLCIYY 287


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = -1

Query: 592 DCLIQILFTYTLFYLVKIFY 533
           D L+ +++T+ LFYL   FY
Sbjct: 311 DTLV-VIYTFNLFYLCFCFY 329


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = -1

Query: 592 DCLIQILFTYTLFYLVKIFY 533
           D L+ +++T+ LFYL   FY
Sbjct: 267 DTLV-VIYTFNLFYLCFCFY 285


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 9/34 (26%), Positives = 14/34 (41%)
 Frame = +2

Query: 275 DGNSMCNHGRVL*LSKLCNTRPSPNRRATKNRST 376
           DG   C +G  +     CN +P     + +N  T
Sbjct: 111 DGKLSCGNGECIDKELFCNGKPDCKDESDENSCT 144


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 9/34 (26%), Positives = 14/34 (41%)
 Frame = +2

Query: 275 DGNSMCNHGRVL*LSKLCNTRPSPNRRATKNRST 376
           DG   C +G  +     CN +P     + +N  T
Sbjct: 118 DGKLSCGNGECIDKELFCNGKPDCKDESDENSCT 151


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = +1

Query: 37  QLLLNVKYILFST*FKFNLLYHLWSFKTTN 126
           QLLL +   L  T ++   L  LWS  +TN
Sbjct: 235 QLLLTILTYLIWTIYEMYHLAILWSCTSTN 264


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 132,349
Number of Sequences: 336
Number of extensions: 2515
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17489640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)