Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_pT_C01
         (673 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF078788-4|AAC26961.1|  342|Caenorhabditis elegans Hypothetical ...    31   0.56 
Z81536-3|CAB63200.1|  333|Caenorhabditis elegans Hypothetical pr...    30   1.7  
Z99286-2|CAH60793.1|  310|Caenorhabditis elegans Hypothetical pr...    28   6.9  
Z82272-6|CAB05222.1| 1431|Caenorhabditis elegans Hypothetical pr...    28   6.9  
Z82059-9|CAB04875.1|  292|Caenorhabditis elegans Hypothetical pr...    28   6.9  
AF129111-1|AAD37121.1|  292|Caenorhabditis elegans cell division...    28   6.9  

>AF078788-4|AAC26961.1|  342|Caenorhabditis elegans Hypothetical
           protein ZC190.2 protein.
          Length = 342

 Score = 31.5 bits (68), Expect = 0.56
 Identities = 13/41 (31%), Positives = 25/41 (60%)
 Frame = -1

Query: 652 ISEMSDPFACKEYYTSNRIIDCLIQILFTYTLFYLVKIFYD 530
           IS ++  F   +++++  I+ C+I +L  +   YLV+I YD
Sbjct: 123 ISTLNPKFRKSKFFSAVFIVGCIIGMLSAFLYIYLVRISYD 163


>Z81536-3|CAB63200.1|  333|Caenorhabditis elegans Hypothetical
           protein F40D4.3 protein.
          Length = 333

 Score = 29.9 bits (64), Expect = 1.7
 Identities = 14/34 (41%), Positives = 21/34 (61%)
 Frame = +3

Query: 237 LTPSQRSIRIALATEIACVITDVCYDYPNCVIQD 338
           L P Q S R+ L ++  C+ TDV +D+PN  + D
Sbjct: 158 LLPDQESGRLVLKSKSQCIPTDV-FDHPNFFLLD 190


>Z99286-2|CAH60793.1|  310|Caenorhabditis elegans Hypothetical
           protein Y7A9C.8 protein.
          Length = 310

 Score = 27.9 bits (59), Expect = 6.9
 Identities = 14/44 (31%), Positives = 22/44 (50%)
 Frame = -1

Query: 643 MSDPFACKEYYTSNRIIDCLIQILFTYTLFYLVKIFYDIISTNL 512
           MS+  A  +Y  S   +     I   +TLFYL+   + ++S NL
Sbjct: 1   MSNSSAFIDYIISEPTVGGFFAIFLIFTLFYLITFPFYVLSFNL 44


>Z82272-6|CAB05222.1| 1431|Caenorhabditis elegans Hypothetical protein
            F55G11.9 protein.
          Length = 1431

 Score = 27.9 bits (59), Expect = 6.9
 Identities = 18/54 (33%), Positives = 24/54 (44%), Gaps = 1/54 (1%)
 Frame = -1

Query: 646  EMSDPFACKEYYTSNRIIDCLIQILFTYTLFYLVKIFYDIIS-TNLPNSNN*LI 488
            E SD F  K     N +  C+I I+F   L Y V + Y   S  N P   + L+
Sbjct: 930  EESDVFNKKPEILMNLLASCIIVIIFYSFLLYFVSLVYLTASLINTPTKGSLLL 983


>Z82059-9|CAB04875.1|  292|Caenorhabditis elegans Hypothetical
           protein T27E9.3 protein.
          Length = 292

 Score = 27.9 bits (59), Expect = 6.9
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = -2

Query: 657 LRSLKCRTRLRVRSIIHRIELLTV*FRYCSR 565
           LR LK R  +R+  ++H    LT+ F YC +
Sbjct: 55  LRELKHRNVVRLYDVVHSENKLTLVFEYCDQ 85


>AF129111-1|AAD37121.1|  292|Caenorhabditis elegans cell division
           protein kinase 5 protein.
          Length = 292

 Score = 27.9 bits (59), Expect = 6.9
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = -2

Query: 657 LRSLKCRTRLRVRSIIHRIELLTV*FRYCSR 565
           LR LK R  +R+  ++H    LT+ F YC +
Sbjct: 55  LRELKHRNVVRLYDVVHSENKLTLVFEYCDQ 85


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,692,332
Number of Sequences: 27780
Number of extensions: 231625
Number of successful extensions: 535
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 518
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 535
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1518563232
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)