Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_pT_B24
         (751 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q5AHZ0 Cluster: Potential mitochondrial protein Fmp47; ...    34   4.3  
UniRef50_Q7RT00 Cluster: Drosophila melanogaster CG5044 gene pro...    33   7.5  
UniRef50_A5KA11 Cluster: Putative uncharacterized protein; n=1; ...    33   7.5  
UniRef50_A4Q3T7 Cluster: Terpene synthase-like; Terpenoid syntha...    33   9.9  

>UniRef50_Q5AHZ0 Cluster: Potential mitochondrial protein Fmp47; n=1;
            Candida albicans|Rep: Potential mitochondrial protein
            Fmp47 - Candida albicans (Yeast)
          Length = 1179

 Score = 33.9 bits (74), Expect = 4.3
 Identities = 18/43 (41%), Positives = 28/43 (65%), Gaps = 2/43 (4%)
 Frame = +1

Query: 34   STNKYLIFTKISSYNF*DISHNSYTLKRQLLETFVVL--LLCS 156
            S + Y+I  +I +Y F  +S  SYTLK Q+++T  +L  LLC+
Sbjct: 963  SKDIYMISLRIFNYGFTLVSQESYTLKTQIIKTLRLLLPLLCT 1005


>UniRef50_Q7RT00 Cluster: Drosophila melanogaster CG5044 gene
           product; n=6; Plasmodium|Rep: Drosophila melanogaster
           CG5044 gene product - Plasmodium yoelii yoelii
          Length = 476

 Score = 33.1 bits (72), Expect = 7.5
 Identities = 22/97 (22%), Positives = 45/97 (46%), Gaps = 4/97 (4%)
 Frame = +1

Query: 7   NYVDCKQYYS-TNKYLIFTKISSYNF*DISHNSYTLKRQLLETFVVLLLCSYETRVSNTR 183
           N+V C    +    YL+     S+N   I++N + +K+ +++ F+      Y+     + 
Sbjct: 382 NFVSCPDILNGITSYLVKNTDRSFNSNYINNNIFEVKKDIIQYFIF-----YKNNYEYSS 436

Query: 184 LKSPFVSSCKLHIVLC---NYRNSHASSATKQYYKNK 285
              P +S   L ++     NY + H +S  K +Y+N+
Sbjct: 437 CDRPDISLSSLSVLEKYNQNYNSQHGNSHDKLFYQNE 473


>UniRef50_A5KA11 Cluster: Putative uncharacterized protein; n=1;
            Plasmodium vivax|Rep: Putative uncharacterized protein -
            Plasmodium vivax
          Length = 2591

 Score = 33.1 bits (72), Expect = 7.5
 Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
 Frame = +3

Query: 450  SNTRRAHCGLGE-CVITINSYK-NSLHLCNIFKCDTRKYNGLHKAY 581
            +N   +  G GE C +  NSY  N+L L N +  + + YN LHK Y
Sbjct: 2291 NNDDNSDSGEGEGCALLANSYNSNALFLDNDYSVEKKIYNDLHKQY 2336


>UniRef50_A4Q3T7 Cluster: Terpene synthase-like; Terpenoid synthase;
           n=4; Medicago truncatula|Rep: Terpene synthase-like;
           Terpenoid synthase - Medicago truncatula (Barrel medic)
          Length = 557

 Score = 32.7 bits (71), Expect = 9.9
 Identities = 13/54 (24%), Positives = 26/54 (48%)
 Frame = +3

Query: 423 QWKQNWPIVSNTRRAHCGLGECVITINSYKNSLHLCNIFKCDTRKYNGLHKAYI 584
           +W  NWP + +     C L + ++T    +   H+C++  C  ++Y    +A I
Sbjct: 434 KWVSNWPKIVDAISTICRLMDEIVTSEFERKRGHVCSLLDCYMKQYGMSREAAI 487


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 680,606,595
Number of Sequences: 1657284
Number of extensions: 12889598
Number of successful extensions: 27925
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 26914
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27911
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 61734884250
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)