Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_pT_B23
         (600 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.         27   0.61 
AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein ...    25   2.5  
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    23   10.0 
AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein p...    23   10.0 

>AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.
          Length = 679

 Score = 26.6 bits (56), Expect = 0.61
 Identities = 18/53 (33%), Positives = 22/53 (41%), Gaps = 8/53 (15%)
 Frame = -3

Query: 496 HCHGVHRPGLHCPSXHCPSVHCPSLHRPSLHRPS--------XHRPSLHRPNL 362
           H H    P L     H PSVH P+ H P  ++P+         H P  H P L
Sbjct: 119 HQHHHQHPHLPHVQQHHPSVHHPA-HHPLHYQPAAAAAMHHHHHHPHHHHPGL 170


>AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein
           protein.
          Length = 680

 Score = 24.6 bits (51), Expect = 2.5
 Identities = 10/35 (28%), Positives = 17/35 (48%)
 Frame = -3

Query: 391 HRPSLHRPNLRSPSIHRPSIYCPGLRCPYIHRPNL 287
           H    H P+  +P+    +  CP  + P+ H+ NL
Sbjct: 401 HMNYYHNPDYVAPTPKAKTHICPTCKRPFRHKGNL 435



 Score = 24.2 bits (50), Expect = 3.3
 Identities = 12/44 (27%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
 Frame = -3

Query: 496 HCHGVHRPGLHCPSXHCPSVHCPSLHRPSLHRPSXHR-PSLHRP 368
           H +  H P    P+    +  CP+  RP  H+ +  R  ++H P
Sbjct: 401 HMNYYHNPDYVAPTPKAKTHICPTCKRPFRHKGNLIRHMAMHDP 444


>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
            growth factor receptorprotein.
          Length = 1433

 Score = 22.6 bits (46), Expect = 10.0
 Identities = 11/30 (36%), Positives = 14/30 (46%)
 Frame = -3

Query: 421  HRPSLHRPSXHRPSLHRPNLRSPSIHRPSI 332
            H+P L + S H  S H     S   H PS+
Sbjct: 1334 HQPQLSQSSHHSSSSHGGPTPSIISHTPSL 1363


>AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein
           protein.
          Length = 724

 Score = 22.6 bits (46), Expect = 10.0
 Identities = 9/23 (39%), Positives = 10/23 (43%)
 Frame = -3

Query: 418 RPSLHRPSXHRPSLHRPNLRSPS 350
           RP   RP   RP   R   R P+
Sbjct: 472 RPQQQRPQQQRPQQQRSQQRKPA 494


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 273,118
Number of Sequences: 2352
Number of extensions: 4246
Number of successful extensions: 14
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 58029966
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)