Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_pT_B20
         (610 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF129420-1|AAD29408.1| 1685|Drosophila melanogaster AXO protein.       29   5.0  
AE014296-890|AAF47929.2| 1765|Drosophila melanogaster CG18296-PA...    29   5.0  
Z21641-1|CAA79756.1|  764|Drosophila melanogaster irreC-roughest...    29   6.6  
L11040-1|AAA16632.1|  764|Drosophila melanogaster irreC roughest...    29   6.6  
AY128456-1|AAM75049.1|  764|Drosophila melanogaster RE01586p pro...    29   6.6  
AE014298-489|AAF45845.2|  764|Drosophila melanogaster CG4125-PA ...    29   6.6  

>AF129420-1|AAD29408.1| 1685|Drosophila melanogaster AXO protein.
          Length = 1685

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
 Frame = -2

Query: 531  YILKIVISLSA-CGNYVKSNCYPAVLEEHRIRW 436
            ++L+ +IS S  C  Y+K +CY A LE H   W
Sbjct: 958  HMLQELISHSLYCTQYIKYDCYRAQLELHSATW 990


>AE014296-890|AAF47929.2| 1765|Drosophila melanogaster CG18296-PA
            protein.
          Length = 1765

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
 Frame = -2

Query: 531  YILKIVISLSA-CGNYVKSNCYPAVLEEHRIRW 436
            ++L+ +IS S  C  Y+K +CY A LE H   W
Sbjct: 961  HMLQELISHSLYCTQYIKYDCYRAQLELHSATW 993


>Z21641-1|CAA79756.1|  764|Drosophila melanogaster irreC-roughest
           protein protein.
          Length = 764

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 17/30 (56%), Positives = 21/30 (70%), Gaps = 2/30 (6%)
 Frame = -3

Query: 299 VAILLCLIILPIKY--CKKKTKL*IANVIA 216
           VA LL L IL + Y  CKK+TKL  A+VI+
Sbjct: 542 VAFLLVLTILVVVYIKCKKRTKLPPADVIS 571


>L11040-1|AAA16632.1|  764|Drosophila melanogaster irreC roughest
           protein protein.
          Length = 764

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 17/30 (56%), Positives = 21/30 (70%), Gaps = 2/30 (6%)
 Frame = -3

Query: 299 VAILLCLIILPIKY--CKKKTKL*IANVIA 216
           VA LL L IL + Y  CKK+TKL  A+VI+
Sbjct: 542 VAFLLVLTILVVVYIKCKKRTKLPPADVIS 571


>AY128456-1|AAM75049.1|  764|Drosophila melanogaster RE01586p
           protein.
          Length = 764

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 17/30 (56%), Positives = 21/30 (70%), Gaps = 2/30 (6%)
 Frame = -3

Query: 299 VAILLCLIILPIKY--CKKKTKL*IANVIA 216
           VA LL L IL + Y  CKK+TKL  A+VI+
Sbjct: 542 VAFLLVLTILVVVYIKCKKRTKLPPADVIS 571


>AE014298-489|AAF45845.2|  764|Drosophila melanogaster CG4125-PA
           protein.
          Length = 764

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 17/30 (56%), Positives = 21/30 (70%), Gaps = 2/30 (6%)
 Frame = -3

Query: 299 VAILLCLIILPIKY--CKKKTKL*IANVIA 216
           VA LL L IL + Y  CKK+TKL  A+VI+
Sbjct: 542 VAFLLVLTILVVVYIKCKKRTKLPPADVIS 571


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,932,057
Number of Sequences: 53049
Number of extensions: 480674
Number of successful extensions: 679
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 662
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 679
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2503659279
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)