Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P04_pT_B17
(398 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X79238-1|CAA55820.1| 115|Homo sapiens ribosomal protein L30 pro... 180 2e-45
L05095-1|AAC15858.1| 115|Homo sapiens ribosomal protein L30 pro... 180 2e-45
BC095426-1|AAH95426.1| 115|Homo sapiens ribosomal protein L30 p... 180 2e-45
BC032700-1|AAH32700.1| 115|Homo sapiens ribosomal protein L30 p... 180 2e-45
AB070559-1|BAB79491.1| 115|Homo sapiens ribosomal protein L30 p... 180 2e-45
X81625-1|CAA57281.1| 437|Homo sapiens C11 protein protein. 34 0.15
U90176-1|AAB49726.1| 437|Homo sapiens eukaryotic release factor... 34 0.15
BT007374-1|AAP36038.1| 404|Homo sapiens eukaryotic translation ... 34 0.15
BC088358-1|AAH88358.1| 437|Homo sapiens eukaryotic translation ... 34 0.15
BC014269-1|AAH14269.1| 404|Homo sapiens ETF1 protein protein. 34 0.15
AF095901-1|AAD43966.1| 437|Homo sapiens eRF1 protein. 34 0.15
AY766461-7|AAX07304.1| 68|Homo sapiens CC chemokine ligand 4L2... 29 5.7
AY766461-6|AAX07302.1| 103|Homo sapiens CC chemokine ligand 4L2... 29 5.7
AY766458-1|AAX07317.1| 103|Homo sapiens CC chemokine ligand 4L2... 29 5.7
AY766457-1|AAX07316.1| 68|Homo sapiens CC chemokine ligand 4L2... 29 5.7
J04449-1|AAA35747.1| 502|Homo sapiens cytochrome P450 nifedipin... 29 7.5
>X79238-1|CAA55820.1| 115|Homo sapiens ribosomal protein L30
protein.
Length = 115
Score = 180 bits (438), Expect = 2e-45
Identities = 85/99 (85%), Positives = 90/99 (90%)
Frame = -3
Query: 324 MVAAKKQKKTIESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEI 145
MVAAKK KK++ESINSRL LVMKSGKY LGYKQTLK +RQGKAKLVI+A N P LRKSEI
Sbjct: 1 MVAAKKTKKSLESINSRLQLVMKSGKYVLGYKQTLKMIRQGKAKLVILANNCPALRKSEI 60
Query: 144 EYYALLAKTGVHHYSGNNIELGTACGKYYRVCTLAITXP 28
EYYA+LAKTGVHHYSGNNIELGTACGKYYRVCTLAI P
Sbjct: 61 EYYAMLAKTGVHHYSGNNIELGTACGKYYRVCTLAIIDP 99
>L05095-1|AAC15858.1| 115|Homo sapiens ribosomal protein L30
protein.
Length = 115
Score = 180 bits (438), Expect = 2e-45
Identities = 85/99 (85%), Positives = 90/99 (90%)
Frame = -3
Query: 324 MVAAKKQKKTIESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEI 145
MVAAKK KK++ESINSRL LVMKSGKY LGYKQTLK +RQGKAKLVI+A N P LRKSEI
Sbjct: 1 MVAAKKTKKSLESINSRLQLVMKSGKYVLGYKQTLKMIRQGKAKLVILANNCPALRKSEI 60
Query: 144 EYYALLAKTGVHHYSGNNIELGTACGKYYRVCTLAITXP 28
EYYA+LAKTGVHHYSGNNIELGTACGKYYRVCTLAI P
Sbjct: 61 EYYAMLAKTGVHHYSGNNIELGTACGKYYRVCTLAIIDP 99
>BC095426-1|AAH95426.1| 115|Homo sapiens ribosomal protein L30
protein.
Length = 115
Score = 180 bits (438), Expect = 2e-45
Identities = 85/99 (85%), Positives = 90/99 (90%)
Frame = -3
Query: 324 MVAAKKQKKTIESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEI 145
MVAAKK KK++ESINSRL LVMKSGKY LGYKQTLK +RQGKAKLVI+A N P LRKSEI
Sbjct: 1 MVAAKKTKKSLESINSRLQLVMKSGKYVLGYKQTLKMIRQGKAKLVILANNCPALRKSEI 60
Query: 144 EYYALLAKTGVHHYSGNNIELGTACGKYYRVCTLAITXP 28
EYYA+LAKTGVHHYSGNNIELGTACGKYYRVCTLAI P
Sbjct: 61 EYYAMLAKTGVHHYSGNNIELGTACGKYYRVCTLAIIDP 99
>BC032700-1|AAH32700.1| 115|Homo sapiens ribosomal protein L30
protein.
Length = 115
Score = 180 bits (438), Expect = 2e-45
Identities = 85/99 (85%), Positives = 90/99 (90%)
Frame = -3
Query: 324 MVAAKKQKKTIESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEI 145
MVAAKK KK++ESINSRL LVMKSGKY LGYKQTLK +RQGKAKLVI+A N P LRKSEI
Sbjct: 1 MVAAKKTKKSLESINSRLQLVMKSGKYVLGYKQTLKMIRQGKAKLVILANNCPALRKSEI 60
Query: 144 EYYALLAKTGVHHYSGNNIELGTACGKYYRVCTLAITXP 28
EYYA+LAKTGVHHYSGNNIELGTACGKYYRVCTLAI P
Sbjct: 61 EYYAMLAKTGVHHYSGNNIELGTACGKYYRVCTLAIIDP 99
>AB070559-1|BAB79491.1| 115|Homo sapiens ribosomal protein L30
protein.
Length = 115
Score = 180 bits (438), Expect = 2e-45
Identities = 85/99 (85%), Positives = 90/99 (90%)
Frame = -3
Query: 324 MVAAKKQKKTIESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEI 145
MVAAKK KK++ESINSRL LVMKSGKY LGYKQTLK +RQGKAKLVI+A N P LRKSEI
Sbjct: 1 MVAAKKTKKSLESINSRLQLVMKSGKYVLGYKQTLKMIRQGKAKLVILANNCPALRKSEI 60
Query: 144 EYYALLAKTGVHHYSGNNIELGTACGKYYRVCTLAITXP 28
EYYA+LAKTGVHHYSGNNIELGTACGKYYRVCTLAI P
Sbjct: 61 EYYAMLAKTGVHHYSGNNIELGTACGKYYRVCTLAIIDP 99
>X81625-1|CAA57281.1| 437|Homo sapiens C11 protein protein.
Length = 437
Score = 34.3 bits (75), Expect = 0.15
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = -3
Query: 255 SGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLR 157
+GKYC G + TLK L G +++I+ +N +R
Sbjct: 298 TGKYCFGVEDTLKALEMGAVEILIVYENLDIMR 330
>U90176-1|AAB49726.1| 437|Homo sapiens eukaryotic release factor 1
protein.
Length = 437
Score = 34.3 bits (75), Expect = 0.15
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = -3
Query: 255 SGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLR 157
+GKYC G + TLK L G +++I+ +N +R
Sbjct: 298 TGKYCFGVEDTLKALEMGAVEILIVYENLDIMR 330
>BT007374-1|AAP36038.1| 404|Homo sapiens eukaryotic translation
termination factor 1 protein.
Length = 404
Score = 34.3 bits (75), Expect = 0.15
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = -3
Query: 255 SGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLR 157
+GKYC G + TLK L G +++I+ +N +R
Sbjct: 265 TGKYCFGVEDTLKALEMGAVEILIVYENLDIMR 297
>BC088358-1|AAH88358.1| 437|Homo sapiens eukaryotic translation
termination factor 1 protein.
Length = 437
Score = 34.3 bits (75), Expect = 0.15
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = -3
Query: 255 SGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLR 157
+GKYC G + TLK L G +++I+ +N +R
Sbjct: 298 TGKYCFGVEDTLKALEMGAVEILIVYENLDIMR 330
>BC014269-1|AAH14269.1| 404|Homo sapiens ETF1 protein protein.
Length = 404
Score = 34.3 bits (75), Expect = 0.15
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = -3
Query: 255 SGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLR 157
+GKYC G + TLK L G +++I+ +N +R
Sbjct: 265 TGKYCFGVEDTLKALEMGAVEILIVYENLDIMR 297
>AF095901-1|AAD43966.1| 437|Homo sapiens eRF1 protein.
Length = 437
Score = 34.3 bits (75), Expect = 0.15
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = -3
Query: 255 SGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLR 157
+GKYC G + TLK L G +++I+ +N +R
Sbjct: 298 TGKYCFGVEDTLKALEMGAVEILIVYENLDIMR 330
>AY766461-7|AAX07304.1| 68|Homo sapiens CC chemokine ligand 4L2bd2
protein.
Length = 68
Score = 29.1 bits (62), Expect = 5.7
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = -1
Query: 383 GRCFSICALGEDSLAFTLPKWLQQRNRKRPSS 288
G CF C+ G+D + + P W R RK P++
Sbjct: 35 GVCFQCCS-GKDPIHQSCPTWTMVRQRKMPTT 65
>AY766461-6|AAX07302.1| 103|Homo sapiens CC chemokine ligand 4L2f
protein.
Length = 103
Score = 29.1 bits (62), Expect = 5.7
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = -1
Query: 383 GRCFSICALGEDSLAFTLPKWLQQRNRKRPSS 288
G CF C+ G+D + + P W R RK P++
Sbjct: 70 GVCFQCCS-GKDPIHQSCPTWTMVRQRKMPTT 100
>AY766458-1|AAX07317.1| 103|Homo sapiens CC chemokine ligand 4L2f
protein.
Length = 103
Score = 29.1 bits (62), Expect = 5.7
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = -1
Query: 383 GRCFSICALGEDSLAFTLPKWLQQRNRKRPSS 288
G CF C+ G+D + + P W R RK P++
Sbjct: 70 GVCFQCCS-GKDPIHQSCPTWTMVRQRKMPTT 100
>AY766457-1|AAX07316.1| 68|Homo sapiens CC chemokine ligand 4L2bd2
protein.
Length = 68
Score = 29.1 bits (62), Expect = 5.7
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = -1
Query: 383 GRCFSICALGEDSLAFTLPKWLQQRNRKRPSS 288
G CF C+ G+D + + P W R RK P++
Sbjct: 35 GVCFQCCS-GKDPIHQSCPTWTMVRQRKMPTT 65
>J04449-1|AAA35747.1| 502|Homo sapiens cytochrome P450 nifedipine
oxidase protein.
Length = 502
Score = 28.7 bits (61), Expect = 7.5
Identities = 14/47 (29%), Positives = 28/47 (59%)
Frame = +2
Query: 152 DFLSGGAFLAMITSFALPCRRVFKVCLYPKQYFPDFITKARRELIDS 292
DFL FL++I F +P V +C++P++ +F+ K+ + + +S
Sbjct: 214 DFLDP-FFLSIIFPFLIPILEVLNICVFPRE-VTNFLRKSVKRMKES 258
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 58,096,404
Number of Sequences: 237096
Number of extensions: 1061387
Number of successful extensions: 1864
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1836
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1864
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2870859500
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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