Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P04_pT_B16
(708 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF106589-2|AAC78230.1| 107|Caenorhabditis elegans Hypothetical ... 50 1e-06
U23168-7|AAC38808.1| 115|Caenorhabditis elegans Hypothetical pr... 42 4e-04
U23168-6|AAP86623.1| 114|Caenorhabditis elegans Hypothetical pr... 42 4e-04
DQ241300-1|ABB45864.1| 114|Caenorhabditis elegans TRX-1b protein. 42 4e-04
DQ241299-1|ABB45863.1| 115|Caenorhabditis elegans TRX-1a protein. 42 4e-04
Z81552-7|CAB04487.2| 606|Caenorhabditis elegans Hypothetical pr... 40 0.002
AL117201-5|CAB57916.1| 606|Caenorhabditis elegans Hypothetical ... 40 0.002
AF250925-1|AAF74721.1| 542|Caenorhabditis elegans PNGase protein. 38 0.005
AC024827-2|AAF60805.2| 254|Caenorhabditis elegans Hypothetical ... 38 0.009
AF143900-1|AAF66677.1| 284|Caenorhabditis elegans thioredoxin-l... 36 0.038
AF143405-1|AAF66636.1| 284|Caenorhabditis elegans thioredoxin-l... 36 0.038
AC024810-17|AAF60759.1| 284|Caenorhabditis elegans Hypothetical... 36 0.038
Z71178-7|CAA94881.1| 119|Caenorhabditis elegans Hypothetical pr... 33 0.20
Z54218-1|CAA90954.1| 315|Caenorhabditis elegans Hypothetical pr... 29 4.3
AF125951-5|AAL27238.1| 345|Caenorhabditis elegans Hypothetical ... 29 4.3
AF125951-4|AAT68898.1| 342|Caenorhabditis elegans Hypothetical ... 29 4.3
Z81486-6|CAB03988.2| 309|Caenorhabditis elegans Hypothetical pr... 28 5.7
U97402-2|AAB63409.2| 393|Caenorhabditis elegans Hypothetical pr... 27 9.9
U97402-1|ABB51193.1| 393|Caenorhabditis elegans Hypothetical pr... 27 9.9
U97016-4|AAN84886.1| 2692|Caenorhabditis elegans Lethal protein ... 27 9.9
U97016-3|AAN84885.1| 2695|Caenorhabditis elegans Lethal protein ... 27 9.9
U28971-4|AAK68668.1| 628|Caenorhabditis elegans Hypothetical pr... 27 9.9
AF043704-4|AAK21479.1| 109|Caenorhabditis elegans Hypothetical ... 27 9.9
>AF106589-2|AAC78230.1| 107|Caenorhabditis elegans Hypothetical
protein Y44E3A.3 protein.
Length = 107
Score = 50.4 bits (115), Expect = 1e-06
Identities = 20/34 (58%), Positives = 26/34 (76%)
Frame = -3
Query: 706 DECEDIASEYXINSMPTFVFVKNGKKLDEFSGAN 605
DEC+ + EY INSMPTF+ + +G K D+FSGAN
Sbjct: 61 DECDGVGEEYEINSMPTFLLIVDGIKKDQFSGAN 94
>U23168-7|AAC38808.1| 115|Caenorhabditis elegans Hypothetical
protein B0228.5a protein.
Length = 115
Score = 41.9 bits (94), Expect = 4e-04
Identities = 16/36 (44%), Positives = 22/36 (61%)
Frame = -3
Query: 706 DECEDIASEYXINSMPTFVFVKNGKKLDEFSGANVD 599
DE ED+ S+Y + MPTF+F KNG ++ G D
Sbjct: 67 DEAEDLCSKYDVKMMPTFIFTKNGDAIEALEGCVED 102
>U23168-6|AAP86623.1| 114|Caenorhabditis elegans Hypothetical
protein B0228.5b protein.
Length = 114
Score = 41.9 bits (94), Expect = 4e-04
Identities = 16/36 (44%), Positives = 22/36 (61%)
Frame = -3
Query: 706 DECEDIASEYXINSMPTFVFVKNGKKLDEFSGANVD 599
DE ED+ S+Y + MPTF+F KNG ++ G D
Sbjct: 66 DEAEDLCSKYDVKMMPTFIFTKNGDAIEALEGCVED 101
>DQ241300-1|ABB45864.1| 114|Caenorhabditis elegans TRX-1b protein.
Length = 114
Score = 41.9 bits (94), Expect = 4e-04
Identities = 16/36 (44%), Positives = 22/36 (61%)
Frame = -3
Query: 706 DECEDIASEYXINSMPTFVFVKNGKKLDEFSGANVD 599
DE ED+ S+Y + MPTF+F KNG ++ G D
Sbjct: 66 DEAEDLCSKYDVKMMPTFIFTKNGDAIEALEGCVED 101
>DQ241299-1|ABB45863.1| 115|Caenorhabditis elegans TRX-1a protein.
Length = 115
Score = 41.9 bits (94), Expect = 4e-04
Identities = 16/36 (44%), Positives = 22/36 (61%)
Frame = -3
Query: 706 DECEDIASEYXINSMPTFVFVKNGKKLDEFSGANVD 599
DE ED+ S+Y + MPTF+F KNG ++ G D
Sbjct: 67 DEAEDLCSKYDVKMMPTFIFTKNGDAIEALEGCVED 102
>Z81552-7|CAB04487.2| 606|Caenorhabditis elegans Hypothetical
protein F56G4.5 protein.
Length = 606
Score = 39.9 bits (89), Expect = 0.002
Identities = 16/34 (47%), Positives = 23/34 (67%)
Frame = -3
Query: 706 DECEDIASEYXINSMPTFVFVKNGKKLDEFSGAN 605
D DI Y I++MPTF+F+KN +++D GAN
Sbjct: 62 DVARDIVQRYNISAMPTFIFLKNRQQVDMVRGAN 95
>AL117201-5|CAB57916.1| 606|Caenorhabditis elegans Hypothetical
protein F56G4.5 protein.
Length = 606
Score = 39.9 bits (89), Expect = 0.002
Identities = 16/34 (47%), Positives = 23/34 (67%)
Frame = -3
Query: 706 DECEDIASEYXINSMPTFVFVKNGKKLDEFSGAN 605
D DI Y I++MPTF+F+KN +++D GAN
Sbjct: 62 DVARDIVQRYNISAMPTFIFLKNRQQVDMVRGAN 95
>AF250925-1|AAF74721.1| 542|Caenorhabditis elegans PNGase protein.
Length = 542
Score = 38.3 bits (85), Expect = 0.005
Identities = 15/30 (50%), Positives = 22/30 (73%)
Frame = -3
Query: 694 DIASEYXINSMPTFVFVKNGKKLDEFSGAN 605
DI Y I++MPTF+F+KN +++D GAN
Sbjct: 2 DIVQRYNISAMPTFIFLKNRQQVDMVRGAN 31
>AC024827-2|AAF60805.2| 254|Caenorhabditis elegans Hypothetical
protein Y55F3AR.2 protein.
Length = 254
Score = 37.5 bits (83), Expect = 0.009
Identities = 15/34 (44%), Positives = 21/34 (61%)
Frame = -3
Query: 706 DECEDIASEYXINSMPTFVFVKNGKKLDEFSGAN 605
DEC A+ Y +N+MPTF+ NG+K GA+
Sbjct: 61 DECRGTAATYGVNAMPTFIAFVNGQKKATIQGAD 94
>AF143900-1|AAF66677.1| 284|Caenorhabditis elegans thioredoxin-like
protein protein.
Length = 284
Score = 35.5 bits (78), Expect = 0.038
Identities = 13/32 (40%), Positives = 23/32 (71%)
Frame = -3
Query: 700 CEDIASEYXINSMPTFVFVKNGKKLDEFSGAN 605
CE +SE +NSMPTF+ ++G ++++ GA+
Sbjct: 63 CEKTSSENGVNSMPTFMVFQSGVRVEQMKGAD 94
>AF143405-1|AAF66636.1| 284|Caenorhabditis elegans thioredoxin-like
protein TXL protein.
Length = 284
Score = 35.5 bits (78), Expect = 0.038
Identities = 13/32 (40%), Positives = 23/32 (71%)
Frame = -3
Query: 700 CEDIASEYXINSMPTFVFVKNGKKLDEFSGAN 605
CE +SE +NSMPTF+ ++G ++++ GA+
Sbjct: 63 CEKTSSENGVNSMPTFMVFQSGVRVEQMKGAD 94
>AC024810-17|AAF60759.1| 284|Caenorhabditis elegans Hypothetical
protein Y54E10A.3 protein.
Length = 284
Score = 35.5 bits (78), Expect = 0.038
Identities = 13/32 (40%), Positives = 23/32 (71%)
Frame = -3
Query: 700 CEDIASEYXINSMPTFVFVKNGKKLDEFSGAN 605
CE +SE +NSMPTF+ ++G ++++ GA+
Sbjct: 63 CEKTSSENGVNSMPTFMVFQSGVRVEQMKGAD 94
>Z71178-7|CAA94881.1| 119|Caenorhabditis elegans Hypothetical
protein B0024.9 protein.
Length = 119
Score = 33.1 bits (72), Expect = 0.20
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = -3
Query: 706 DECEDIASEYXINSMPTFVFVKNGKKLDEFSG 611
D ++A +Y I+++PT KNG+K+ FSG
Sbjct: 71 DHAGELAMDYGISAVPTVFAFKNGEKISGFSG 102
>Z54218-1|CAA90954.1| 315|Caenorhabditis elegans Hypothetical
protein F37B12.1 protein.
Length = 315
Score = 28.7 bits (61), Expect = 4.3
Identities = 21/73 (28%), Positives = 30/73 (41%), Gaps = 8/73 (10%)
Frame = +3
Query: 408 CIPEAANTKKLISSNSLQTLKTFFIYILKTYTCFFF--------KFHLSFHRRLRTTLVS 563
C KL + S ++K +Y L YTC FF LSF R ++
Sbjct: 207 CTSTVTTAPKLTKAKSCDSIKRTRLYFLVVYTCRFFSPTATSHSSHSLSFLGTCRVFWLN 266
Query: 564 IYLCLRIVVLSLS 602
+ L + +LSLS
Sbjct: 267 FTVFLSVSLLSLS 279
>AF125951-5|AAL27238.1| 345|Caenorhabditis elegans Hypothetical
protein D2063.3a protein.
Length = 345
Score = 28.7 bits (61), Expect = 4.3
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = -3
Query: 691 IASEYXINSMPTFVFVKNGKKLDEFSG 611
I+ + I + PT VF NGK++D G
Sbjct: 65 ISLNFKITAAPTLVFFSNGKEVDRIDG 91
>AF125951-4|AAT68898.1| 342|Caenorhabditis elegans Hypothetical
protein D2063.3b protein.
Length = 342
Score = 28.7 bits (61), Expect = 4.3
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = -3
Query: 691 IASEYXINSMPTFVFVKNGKKLDEFSG 611
I+ + I + PT VF NGK++D G
Sbjct: 65 ISLNFKITAAPTLVFFSNGKEVDRIDG 91
>Z81486-6|CAB03988.2| 309|Caenorhabditis elegans Hypothetical
protein C53A5.8 protein.
Length = 309
Score = 28.3 bits (60), Expect = 5.7
Identities = 21/61 (34%), Positives = 31/61 (50%)
Frame = +3
Query: 462 TLKTFFIYILKTYTCFFFKFHLSFHRRLRTTLVSIYLCLRIVVLSLSTLAPENSSSFLPF 641
T+ F+ IL F KF SF+R L+ L++ LC + SL ++ +N FLP
Sbjct: 29 TITVVFMLILLFLFQFSKKFSYSFYRILQLDLITNILC---NLNSLFSVRFQNHLMFLPV 85
Query: 642 L 644
L
Sbjct: 86 L 86
>U97402-2|AAB63409.2| 393|Caenorhabditis elegans Hypothetical
protein C30H7.2a protein.
Length = 393
Score = 27.5 bits (58), Expect = 9.9
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = -3
Query: 706 DECEDIASEYXINSMPTFVFVKNGK 632
D+ DIA++Y +N PT +NG+
Sbjct: 79 DKNNDIATKYHVNKYPTLKLFRNGE 103
>U97402-1|ABB51193.1| 393|Caenorhabditis elegans Hypothetical
protein C30H7.2b protein.
Length = 393
Score = 27.5 bits (58), Expect = 9.9
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = -3
Query: 706 DECEDIASEYXINSMPTFVFVKNGK 632
D+ DIA++Y +N PT +NG+
Sbjct: 79 DKNNDIATKYHVNKYPTLKLFRNGE 103
>U97016-4|AAN84886.1| 2692|Caenorhabditis elegans Lethal protein
363, isoform b protein.
Length = 2692
Score = 27.5 bits (58), Expect = 9.9
Identities = 19/61 (31%), Positives = 29/61 (47%)
Frame = +3
Query: 420 AANTKKLISSNSLQTLKTFFIYILKTYTCFFFKFHLSFHRRLRTTLVSIYLCLRIVVLSL 599
A + +K IS S KT +L Y F F F ++H ++ T + +I L + LS
Sbjct: 455 ATHIEKTISFISAAIKKTTNSDVLDNYFTFLFLFVDAYHEQVTTQIKAIIPQLMDITLSR 514
Query: 600 S 602
S
Sbjct: 515 S 515
>U97016-3|AAN84885.1| 2695|Caenorhabditis elegans Lethal protein
363, isoform a protein.
Length = 2695
Score = 27.5 bits (58), Expect = 9.9
Identities = 19/61 (31%), Positives = 29/61 (47%)
Frame = +3
Query: 420 AANTKKLISSNSLQTLKTFFIYILKTYTCFFFKFHLSFHRRLRTTLVSIYLCLRIVVLSL 599
A + +K IS S KT +L Y F F F ++H ++ T + +I L + LS
Sbjct: 455 ATHIEKTISFISAAIKKTTNSDVLDNYFTFLFLFVDAYHEQVTTQIKAIIPQLMDITLSR 514
Query: 600 S 602
S
Sbjct: 515 S 515
>U28971-4|AAK68668.1| 628|Caenorhabditis elegans Hypothetical
protein B0244.10 protein.
Length = 628
Score = 27.5 bits (58), Expect = 9.9
Identities = 16/42 (38%), Positives = 25/42 (59%)
Frame = +3
Query: 453 SLQTLKTFFIYILKTYTCFFFKFHLSFHRRLRTTLVSIYLCL 578
S+ TL FF YI+ + +F H +F+RR +L S+Y+ L
Sbjct: 128 SMDTL--FFSYIMISLITYFGVVHYNFYRR-HVSLRSLYIIL 166
>AF043704-4|AAK21479.1| 109|Caenorhabditis elegans Hypothetical
protein W01B11.6a protein.
Length = 109
Score = 27.5 bits (58), Expect = 9.9
Identities = 9/27 (33%), Positives = 18/27 (66%)
Frame = -3
Query: 679 YXINSMPTFVFVKNGKKLDEFSGANVD 599
+ +N++PTFV + NG+++ GA +
Sbjct: 72 FAVNAVPTFVVMNNGEEVTRHVGAEAE 98
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,179,286
Number of Sequences: 27780
Number of extensions: 236694
Number of successful extensions: 549
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 537
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 549
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1645110168
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -