Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_pT_B13
         (749 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_08_0216 - 15942379-15942852,15942956-15943033                       30   2.3  
02_05_0111 - 25928657-25929355                                         29   3.9  
09_02_0393 + 8510089-8510274,8510450-8510806,8510889-8511011,851...    28   6.9  
07_01_0424 + 3231025-3231115,3231241-3231342,3233308-3233465,323...    28   9.1  

>10_08_0216 - 15942379-15942852,15942956-15943033
          Length = 183

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 17/42 (40%), Positives = 22/42 (52%)
 Frame = -3

Query: 741 GPGSGGGANQRTAPQWMLPLLLGPFRSGCCLASATRHVGAVQ 616
           G G+GGG  Q   P +      GP+ SG  + +A   VGAVQ
Sbjct: 126 GYGAGGGYGQAGGPYY------GPYASGAVVVAAEEVVGAVQ 161


>02_05_0111 - 25928657-25929355
          Length = 232

 Score = 29.1 bits (62), Expect = 3.9
 Identities = 16/44 (36%), Positives = 19/44 (43%)
 Frame = -3

Query: 738 PGSGGGANQRTAPQWMLPLLLGPFRSGCCLASATRHVGAVQPPR 607
           PG GGG N     QW+   +LG       +AS    VGA    R
Sbjct: 43  PGDGGGVNYVARAQWLRAAVLGANDGLVSVASLMVGVGAANGTR 86


>09_02_0393 + 8510089-8510274,8510450-8510806,8510889-8511011,
            8511209-8511523,8511576-8511682,8512559-8512629,
            8512952-8513029,8513390-8513454,8514224-8514274,
            8514373-8514414,8514785-8515105,8515154-8517880
          Length = 1480

 Score = 28.3 bits (60), Expect = 6.9
 Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 3/36 (8%)
 Frame = +1

Query: 514  FRYTQVAAKSKWCKYLRSC---NVYTWTTVVANSPW 612
            F    ++ +SKW  YLRSC   N+ T+  V+  S W
Sbjct: 1026 FPLRSLSFQSKWRTYLRSCVRNNLRTFFQVLVQSQW 1061


>07_01_0424 +
           3231025-3231115,3231241-3231342,3233308-3233465,
           3233608-3233715
          Length = 152

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 12/27 (44%), Positives = 15/27 (55%)
 Frame = -2

Query: 625 SCPAATDYLRPQSSTCTHYNYVGTYTI 545
           SCPA+ D+L     T   Y   G+YTI
Sbjct: 96  SCPASGDFLVAHQQTLPSYTPPGSYTI 122


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,288,406
Number of Sequences: 37544
Number of extensions: 333400
Number of successful extensions: 745
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 737
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 745
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1992480932
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)