Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P04_pT_B12
(656 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_03_0532 - 16824394-16824447,16824545-16824665,16824748-168248... 102 2e-22
02_03_0280 - 17256524-17256733,17256838-17256958,17257318-172574... 98 5e-21
08_02_1322 + 26131395-26131599,26132382-26132468,26133119-261333... 95 3e-20
02_05_0823 - 32036445-32036546,32036867-32036919,32037513-320375... 87 1e-17
01_06_1791 - 39907362-39907453,39907682-39907753,39907941-399080... 83 2e-16
09_04_0633 - 19123930-19124009,19124240-19124344,19124453-191245... 80 1e-15
01_06_1316 + 36245368-36245507,36247229-36247315,36248334-362484... 75 4e-14
06_03_1031 - 27018871-27018916,27018987-27019110,27019251-270193... 72 4e-13
04_04_0027 + 22232781-22233051,22234256-22234329,22234471-222346... 70 1e-12
05_05_0095 - 22347552-22347696,22347988-22348094,22348114-223482... 70 2e-12
09_02_0288 + 6936867-6936879,6936965-6937038,6937445-6937588,693... 69 3e-12
09_01_0022 + 426649-426663,427170-427420,427479-427577,428321-42... 59 3e-09
08_02_1436 + 27083698-27084111,27084333-27084416,27084502-270845... 56 2e-08
01_05_0361 + 21377080-21377281,21378619-21378705,21379862-213801... 54 1e-07
01_05_0366 + 21419270-21419312,21420372-21420458,21420625-214209... 48 7e-06
01_05_0367 + 21427130-21427136,21427733-21427822,21427927-214281... 47 1e-05
03_03_0065 + 14192725-14192813,14193004-14193088,14193971-141940... 43 2e-04
11_01_0294 + 2212807-2212876,2213664-2213843,2214505-2214594,221... 40 0.002
02_05_0767 + 31609773-31610174,31610409-31610501,31610608-316106... 38 0.005
12_01_0295 + 2235209-2235263,2236182-2236361,2236478-2236567,223... 38 0.009
01_05_0359 + 21350580-21350829,21350990-21351064,21351156-213512... 38 0.009
09_01_0020 + 413723-413738,413867-413934,414849-415144,415275-41... 36 0.037
07_01_0246 + 1809762-1809803,1810383-1810557,1810678-1810763,181... 34 0.11
01_05_0372 + 21541220-21541457,21541832-21541912,21542027-215420... 33 0.15
08_01_0540 + 4691929-4692014,4692915-4693125,4693756-4693885,469... 28 5.7
05_04_0202 - 19010953-19013355 27 9.9
03_04_0162 + 17858802-17861168 27 9.9
>04_03_0532 -
16824394-16824447,16824545-16824665,16824748-16824875,
16825457-16825603,16825682-16825807,16825895-16826160,
16826259-16826453,16826577-16826657,16826756-16826830,
16827270-16827530,16827633-16827719,16827844-16828060
Length = 585
Score = 102 bits (245), Expect = 2e-22
Identities = 46/81 (56%), Positives = 58/81 (71%)
Frame = -2
Query: 655 KFDSSRDRGKPFKFRIGKSEVIRGWDEGVAKMSVGERAKLTCSPDYAYGQQGHPGVIPPN 476
KFDSSRDRG PFKF +G+ EVI+GWDEG+ M GE+A T P+ AYG+ G P IPPN
Sbjct: 84 KFDSSRDRGTPFKFSLGQGEVIKGWDEGIKTMKKGEQAVFTVPPELAYGEAGSPPAIPPN 143
Query: 475 STLIFDVELLRLE*IQFVTKN 413
+TL FDVELL ++ + K+
Sbjct: 144 ATLRFDVELLSWASVKDICKD 164
Score = 48.8 bits (111), Expect = 4e-06
Identities = 26/70 (37%), Positives = 39/70 (55%), Gaps = 3/70 (4%)
Frame = -2
Query: 637 DRGKPFKFRIGKSEVIRGWDEGVAKMSVGERAKLTCSPDYAYGQ---QGHPGVIPPNSTL 467
D +PF+FR + +VI G D V M GE A + P +A+G + V+P NST+
Sbjct: 324 DGDEPFEFRTDEEQVIEGLDRTVVTMKKGEVALVRLPPQHAFGSTETKQDLAVVPANSTV 383
Query: 466 IFDVELLRLE 437
++VEL+ E
Sbjct: 384 WYEVELVSFE 393
Score = 44.0 bits (99), Expect = 1e-04
Identities = 21/49 (42%), Positives = 28/49 (57%), Gaps = 5/49 (10%)
Frame = -2
Query: 577 EGVAKMSVGERAKLTCSPDYAYGQQGHP-----GVIPPNSTLIFDVELL 446
+ V M GE+ LT P Y +G+QG P +PPN+TL D+ELL
Sbjct: 222 KAVKTMKKGEKVLLTVKPQYGFGEQGKPASGAEAAVPPNATLYVDLELL 270
>02_03_0280 -
17256524-17256733,17256838-17256958,17257318-17257445,
17257603-17257671,17257757-17257882,17257970-17258235,
17258341-17258535,17258614-17258694,17258729-17258851,
17258941-17259201,17260044-17260130,17260260-17260578
Length = 661
Score = 98.3 bits (234), Expect = 5e-21
Identities = 44/81 (54%), Positives = 57/81 (70%)
Frame = -2
Query: 655 KFDSSRDRGKPFKFRIGKSEVIRGWDEGVAKMSVGERAKLTCSPDYAYGQQGHPGVIPPN 476
KFDSSRDR PFKF +G+ +VI+GWD G+ M GE A T P+ AYG+ G P VIPPN
Sbjct: 118 KFDSSRDRDAPFKFTLGQGQVIKGWDLGIKTMKKGENAIFTIPPELAYGEDGSPPVIPPN 177
Query: 475 STLIFDVELLRLE*IQFVTKN 413
+TL FDVEL+ E ++ + K+
Sbjct: 178 ATLQFDVELISWESVKDICKD 198
Score = 56.4 bits (130), Expect = 2e-08
Identities = 26/70 (37%), Positives = 43/70 (61%), Gaps = 3/70 (4%)
Frame = -2
Query: 637 DRGKPFKFRIGKSEVIRGWDEGVAKMSVGERAKLTCSPDYAYGQ---QGHPGVIPPNSTL 467
D +PF+F+ + +V+ G D+ V M GE A +T P+YA+G + V+PPNST+
Sbjct: 374 DGDEPFEFKTDEDQVVEGLDKAVLSMKKGEVALVTIPPEYAFGSDETRQDLSVVPPNSTV 433
Query: 466 IFDVELLRLE 437
++VEL+ +
Sbjct: 434 YYEVELVSFD 443
Score = 41.1 bits (92), Expect = 8e-04
Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 5/62 (8%)
Frame = -2
Query: 616 FRIGKSEVIRGWDEGVAKMSVGERAKLTCSPDYAYGQQGHP-----GVIPPNSTLIFDVE 452
+++ K + V M E+A LT P Y +G+QG P IPPN+TL ++E
Sbjct: 259 YKVLKGHFCPAISKAVKTMKKNEKALLTVKPQYGFGEQGRPAARDEAAIPPNATLHINLE 318
Query: 451 LL 446
L+
Sbjct: 319 LV 320
>08_02_1322 +
26131395-26131599,26132382-26132468,26133119-26133372,
26133430-26133526,26133613-26133693,26133782-26133976,
26134093-26134182,26134296-26134471,26134565-26134687,
26134799-26134945,26135027-26135163,26135247-26135364,
26135462-26135518
Length = 588
Score = 95.5 bits (227), Expect = 3e-20
Identities = 42/70 (60%), Positives = 51/70 (72%)
Frame = -2
Query: 655 KFDSSRDRGKPFKFRIGKSEVIRGWDEGVAKMSVGERAKLTCSPDYAYGQQGHPGVIPPN 476
KFDSSRDRG PFKF++G+ +VI+GWD G+ M GE A T PD AYG+ G P IP +
Sbjct: 80 KFDSSRDRGTPFKFKLGQGQVIKGWDLGIKTMKKGENAVFTIPPDLAYGESGSPPTIPAS 139
Query: 475 STLIFDVELL 446
+TL FDVELL
Sbjct: 140 ATLQFDVELL 149
Score = 58.0 bits (134), Expect = 6e-09
Identities = 29/67 (43%), Positives = 42/67 (62%), Gaps = 3/67 (4%)
Frame = -2
Query: 637 DRGKPFKFRIGKSEVIRGWDEGVAKMSVGERAKLTCSPDYAYG---QQGHPGVIPPNSTL 467
D +PF+F+ + EVI G D V M GE A +T P+YA+G + V+PPNST+
Sbjct: 325 DEPEPFEFKTDEEEVIDGIDRAVLNMKNGEVALVTIPPEYAFGSTESKQDLAVVPPNSTV 384
Query: 466 IFDVELL 446
I++VEL+
Sbjct: 385 IYEVELV 391
Score = 40.3 bits (90), Expect = 0.001
Identities = 18/49 (36%), Positives = 28/49 (57%), Gaps = 5/49 (10%)
Frame = -2
Query: 577 EGVAKMSVGERAKLTCSPDYAYGQQGHP-----GVIPPNSTLIFDVELL 446
+ V M E+ LT P Y +G+ G P G +PPN+TL+ ++EL+
Sbjct: 223 KAVKTMKKAEKVLLTVKPQYGFGENGRPAAGEEGAVPPNATLLVNLELV 271
>02_05_0823 -
32036445-32036546,32036867-32036919,32037513-32037574,
32037804-32037837,32038144-32038231
Length = 112
Score = 87.0 bits (206), Expect = 1e-17
Identities = 40/72 (55%), Positives = 52/72 (72%), Gaps = 2/72 (2%)
Frame = -2
Query: 655 KFDSSRDRGK-PFKFRIGKSEVIRGWDEGVAKMSVGERAKLTCSPDYAYGQQGHPG-VIP 482
KF S++D G+ PF F IG+ VI+GWDEGV M VGE A++ C+PDYAYG G P I
Sbjct: 38 KFWSTKDAGQEPFSFNIGQGSVIKGWDEGVMTMQVGEVARIQCTPDYAYGASGFPAWGIR 97
Query: 481 PNSTLIFDVELL 446
PNS L+F++E+L
Sbjct: 98 PNSVLVFEIEVL 109
>01_06_1791 -
39907362-39907453,39907682-39907753,39907941-39908045,
39908212-39908302,39908787-39908849,39909448-39909497,
39909632-39909716
Length = 185
Score = 82.6 bits (195), Expect = 2e-16
Identities = 36/69 (52%), Positives = 47/69 (68%)
Frame = -2
Query: 652 FDSSRDRGKPFKFRIGKSEVIRGWDEGVAKMSVGERAKLTCSPDYAYGQQGHPGVIPPNS 473
FDSS DRG PF+F +G +VI+GWD+G+ M VGE+ KL YG++G P IP +
Sbjct: 75 FDSSYDRGDPFEFTLGNGQVIKGWDQGLLGMCVGEKRKLKIPAKMGYGERGSPPKIPGGA 134
Query: 472 TLIFDVELL 446
TLIFD EL+
Sbjct: 135 TLIFDTELI 143
>09_04_0633 -
19123930-19124009,19124240-19124344,19124453-19124543,
19124647-19124709,19126318-19126368,19126878-19126962,
19127102-19127283,19128493-19128582
Length = 248
Score = 80.2 bits (189), Expect = 1e-15
Identities = 35/69 (50%), Positives = 45/69 (65%)
Frame = -2
Query: 652 FDSSRDRGKPFKFRIGKSEVIRGWDEGVAKMSVGERAKLTCSPDYAYGQQGHPGVIPPNS 473
FDSS +RG P +F +G +VI+GWD+G+ M VGE+ KL YG QG P IP +
Sbjct: 166 FDSSYERGDPIEFELGTGQVIKGWDQGILGMCVGEKRKLKIPSKLGYGAQGSPPTIPGGA 225
Query: 472 TLIFDVELL 446
TLIFD EL+
Sbjct: 226 TLIFDTELV 234
>01_06_1316 +
36245368-36245507,36247229-36247315,36248334-36248439,
36249028-36249204,36249296-36249375,36249432-36249440,
36249474-36249566,36249788-36249947
Length = 283
Score = 75.4 bits (177), Expect = 4e-14
Identities = 35/72 (48%), Positives = 46/72 (63%), Gaps = 3/72 (4%)
Frame = -2
Query: 652 FDSSRDRGKPFKFRIGKSEVIRGWDEGVAKMSVGERAKLTCSPDYAYGQQGHPGVIPP-- 479
FD++ + F F IG+ VI+ WD V M VGE AK+TC P+YAYG G P IPP
Sbjct: 139 FDTTHEDNSVFSFEIGEGTVIKAWDIAVKTMKVGEVAKITCKPEYAYGAAGSPPEIPPEV 198
Query: 478 -NSTLIFDVELL 446
++TL F+VEL+
Sbjct: 199 QSATLTFEVELI 210
>06_03_1031 -
27018871-27018916,27018987-27019110,27019251-27019311,
27019466-27019558,27019663-27020016
Length = 225
Score = 72.1 bits (169), Expect = 4e-13
Identities = 41/85 (48%), Positives = 50/85 (58%), Gaps = 14/85 (16%)
Frame = -2
Query: 652 FDSSRDRGKPFKFRIGKSEVIRGWD------EGVAKMSVGERAKLTCSPDYAYGQQG--- 500
FDSS RGKP FR+G EVI+GWD EG+ M G + L P+ AYG +G
Sbjct: 131 FDSSYKRGKPLTFRVGVGEVIKGWDQGIVGGEGIPPMLAGGKRSLRLPPELAYGARGAGC 190
Query: 499 ---HPG--VIPPNSTLIFDVELLRL 440
P VIPPNSTL+FDVE+ R+
Sbjct: 191 RGWEPTSCVIPPNSTLLFDVEMFRV 215
>04_04_0027 +
22232781-22233051,22234256-22234329,22234471-22234638,
22234812-22234971,22235062-22235145,22235781-22236078,
22236158-22236364,22236465-22236735,22236971-22237055,
22237141-22237182,22237302-22237350,22237825-22237894,
22238314-22238463,22238592-22238619,22238856-22238990,
22240693-22241469,22242133-22242192,22242367-22242413
Length = 991
Score = 70.1 bits (164), Expect = 1e-12
Identities = 35/69 (50%), Positives = 46/69 (66%)
Frame = -2
Query: 652 FDSSRDRGKPFKFRIGKSEVIRGWDEGVAKMSVGERAKLTCSPDYAYGQQGHPGVIPPNS 473
FDS+ R + F FR+G EVI+GWD G+ M VG++ +LT P YG + G IP NS
Sbjct: 526 FDSTVGR-RAFDFRLGIGEVIKGWDIGINGMRVGDKRRLTIPPSMGYGNK-RMGPIPQNS 583
Query: 472 TLIFDVELL 446
TL+FDVEL+
Sbjct: 584 TLVFDVELV 592
>05_05_0095 -
22347552-22347696,22347988-22348094,22348114-22348236,
22348325-22348458,22348766-22348874
Length = 205
Score = 69.7 bits (163), Expect = 2e-12
Identities = 30/63 (47%), Positives = 38/63 (60%)
Frame = -2
Query: 652 FDSSRDRGKPFKFRIGKSEVIRGWDEGVAKMSVGERAKLTCSPDYAYGQQGHPGVIPPNS 473
FD++ + F F IG+ VI+ WD + M VGE AK+TC P+YAYG G P IPP S
Sbjct: 50 FDTTHEDNSIFSFEIGQGAVIKAWDIALRTMKVGEVAKITCKPEYAYGSAGSPPEIPPKS 109
Query: 472 TLI 464
I
Sbjct: 110 VAI 112
>09_02_0288 +
6936867-6936879,6936965-6937038,6937445-6937588,
6937754-6937958,6938552-6938852,6938952-6939150,
6939393-6939477,6939554-6939595,6939676-6939724,
6939872-6939941,6940296-6940301
Length = 395
Score = 68.9 bits (161), Expect = 3e-12
Identities = 28/63 (44%), Positives = 45/63 (71%)
Frame = -2
Query: 628 KPFKFRIGKSEVIRGWDEGVAKMSVGERAKLTCSPDYAYGQQGHPGVIPPNSTLIFDVEL 449
KP+KF++G +VIRGWD G+ M VG++ KLT P YG + G +P NS++I+++EL
Sbjct: 334 KPYKFKLGAGKVIRGWDVGICGMRVGDKRKLTVPPAMCYGSKA-IGEVPKNSSIIYEIEL 392
Query: 448 LRL 440
+++
Sbjct: 393 VKV 395
>09_01_0022 +
426649-426663,427170-427420,427479-427577,428321-428473,
428893-429051,429146-429287,429460-429544,429629-429670,
429784-429832,430540-430639,431240-431287
Length = 380
Score = 59.3 bits (137), Expect = 3e-09
Identities = 29/61 (47%), Positives = 38/61 (62%)
Frame = -2
Query: 619 KFRIGKSEVIRGWDEGVAKMSVGERAKLTCSPDYAYGQQGHPGVIPPNSTLIFDVELLRL 440
KF++G EVI GWD G+ M VG +L P YG G G IPPN+ L FD+ELL++
Sbjct: 298 KFKLGAGEVISGWDLGIDGMRVGGIRRLGIPPHLGYGDVGR-GNIPPNAWLNFDIELLKV 356
Query: 439 E 437
+
Sbjct: 357 K 357
>08_02_1436 +
27083698-27084111,27084333-27084416,27084502-27084551,
27084676-27084724,27085471-27085545,27085724-27085837
Length = 261
Score = 56.4 bits (130), Expect = 2e-08
Identities = 30/73 (41%), Positives = 44/73 (60%), Gaps = 4/73 (5%)
Frame = -2
Query: 652 FDSSRDRGKPFKFRIGKSEVIRGWDEGVAKMSVGERAKLTCSPDYAY--GQQGHPG--VI 485
FDSS ++G+P+ FR+G +VI+G DEG+ M VG +L A+ G PG +
Sbjct: 181 FDSSLEKGQPYIFRVGSGQVIKGLDEGILSMKVGGLRRLYIPGPLAFPKGLTSAPGRPRV 240
Query: 484 PPNSTLIFDVELL 446
P+S ++FDV LL
Sbjct: 241 APSSPVMFDVNLL 253
>01_05_0361 +
21377080-21377281,21378619-21378705,21379862-21380134,
21380304-21380378,21380470-21380550,21380837-21381034,
21381145-21381234,21381310-21381467,21381619-21381741,
21381891-21382034,21382175-21382285,21382583-21382624,
21383043-21383261,21385319-21385627
Length = 703
Score = 53.6 bits (123), Expect = 1e-07
Identities = 30/76 (39%), Positives = 42/76 (55%), Gaps = 5/76 (6%)
Frame = -2
Query: 652 FDSSRDRGKPFKFRIGKSEVIRGWDEGVAKMSVGERAKLTCSPDYAYGQQGH-----PGV 488
F S+R+ G P F +G+ V+RG+ V+ M GE+A T P+ A G + PG
Sbjct: 80 FASTREDGVPLTFILGQENVMRGFSMAVSSMQAGEKAVFTIPPELA-GTKSRCPVDIPGN 138
Query: 487 IPPNSTLIFDVELLRL 440
I PN L FD+EL+ L
Sbjct: 139 IAPNEALRFDIELISL 154
Score = 38.3 bits (85), Expect = 0.005
Identities = 18/74 (24%), Positives = 39/74 (52%), Gaps = 5/74 (6%)
Frame = -2
Query: 619 KFRIGKSEVIRGWDEGVAKMSVGERAKLTCSPDYAYGQQGHPGV-----IPPNSTLIFDV 455
+F + + + V M+ GE A L P+Y +G++G P + +PP++TL +
Sbjct: 207 EFNLAEGFFCPAFARAVETMTEGEEAVLIVKPEYGFGERGRPSIGDEAGVPPDATLYVYL 266
Query: 454 ELLRLE*IQFVTKN 413
+L+ + ++ + +N
Sbjct: 267 QLMSWKTVRHIGEN 280
>01_05_0366 +
21419270-21419312,21420372-21420458,21420625-21420900,
21421560-21421634,21421736-21421816,21422117-21422308,
21422756-21422772
Length = 256
Score = 48.0 bits (109), Expect = 7e-06
Identities = 26/76 (34%), Positives = 42/76 (55%), Gaps = 4/76 (5%)
Frame = -2
Query: 655 KFDSSRDRGKPFKFRIGKSEVIRGWDEGVAKMSVGERAKLTCSPDYAYGQQGHPGV---- 488
+F SSR+ P +F +G+ +V+ G++ V+ M GE+A T + G P
Sbjct: 26 QFVSSRENDIPERFILGQEDVMHGFNLAVSSMQPGEKAIFTIPSALTMTKAGSPASIPSN 85
Query: 487 IPPNSTLIFDVELLRL 440
IPPN TL F++EL+ +
Sbjct: 86 IPPNQTLRFEIELIAM 101
Score = 33.9 bits (74), Expect = 0.11
Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 5/40 (12%)
Frame = -2
Query: 571 VAKMSVGERAKLTCSPDYAYGQQGHP-----GVIPPNSTL 467
V M GE A L P YA+G+QG P +PP++TL
Sbjct: 171 VHTMKEGEEAVLIVKPKYAFGEQGRPSQGEEAAVPPDATL 210
>01_05_0367 +
21427130-21427136,21427733-21427822,21427927-21428105,
21429115-21429432,21430537-21430563
Length = 206
Score = 47.2 bits (107), Expect = 1e-05
Identities = 24/65 (36%), Positives = 38/65 (58%), Gaps = 4/65 (6%)
Frame = -2
Query: 628 KPFKFRIGKSEVIRGWDEGVAKMSVGERAKLTCSPDYAY---GQQGHP-GVIPPNSTLIF 461
+PF+F + + +VI G DE V M GE A+ T P +A+ G H +P N+T+++
Sbjct: 24 EPFEFVVDEGQVIDGLDESVMTMEEGEVAEFTIPPQHAFDAVGSDQHQFAFVPRNATVVY 83
Query: 460 DVELL 446
+ELL
Sbjct: 84 KIELL 88
>03_03_0065 +
14192725-14192813,14193004-14193088,14193971-14194040,
14194730-14194827,14194931-14195101,14196192-14196224,
14196762-14196820,14197143-14197190,14197399-14197480,
14198317-14198475,14199036-14199093,14199801-14199949,
14200403-14200503,14200574-14200643,14201088-14201147,
14201883-14201939,14202247-14202315,14202485-14202562,
14202996-14203097,14203203-14203274,14203361-14203648
Length = 665
Score = 42.7 bits (96), Expect = 2e-04
Identities = 22/68 (32%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Frame = -2
Query: 637 DRGKPFKFRIGKSEVIRGWDEGVAKMSVGERAKLTCSPDYAYGQQGH-PGVIPPNSTLIF 461
+ G+P +F G+ V G++ V M GE++ +TC PD+AY + P +P + + +
Sbjct: 354 NHGEPLEFCSGEGLVPEGFEMCVRLMLPGEKSIVTCPPDFAYDKFPRLPANVPEGAHVQW 413
Query: 460 DVELLRLE 437
++ELL E
Sbjct: 414 EIELLGFE 421
Score = 31.5 bits (68), Expect = 0.61
Identities = 14/31 (45%), Positives = 21/31 (67%)
Frame = -2
Query: 634 RGKPFKFRIGKSEVIRGWDEGVAKMSVGERA 542
+G P +F +GKS++I G+ EG M +GE A
Sbjct: 83 KGVPLRFVLGKSKMILGFAEGFPTMLMGEIA 113
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = -2
Query: 628 KPFKFRIGKSEVIRGWDEGVAKMSVGERAKLTCSPDY 518
+P+ F IGKSEV +G + G+ M+ E+A + + Y
Sbjct: 235 EPYFFTIGKSEVPKGLEMGIGSMAREEKAIIYVTSAY 271
>11_01_0294 +
2212807-2212876,2213664-2213843,2214505-2214594,
2215054-2215238,2215399-2215521,2215593-2215745,
2216090-2216416
Length = 375
Score = 39.5 bits (88), Expect = 0.002
Identities = 24/73 (32%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Frame = -2
Query: 655 KFDSSRDRGKPFKFRIGKSEV-IRGWDEGVAKMSVGERAKLTCSPDYAYGQQGHPGV--I 485
KF+ + P + IGK + + G GV M GERA L + YG++G +
Sbjct: 96 KFEDTWQEQHPIELVIGKEKKQMSGLGIGVGNMRSGERALLHVGWELGYGKEGSFSFPNV 155
Query: 484 PPNSTLIFDVELL 446
PP + L+++VEL+
Sbjct: 156 PPMADLLYEVELI 168
>02_05_0767 +
31609773-31610174,31610409-31610501,31610608-31610668,
31610797-31610865,31611274-31611440
Length = 263
Score = 38.3 bits (85), Expect = 0.005
Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 6/56 (10%)
Frame = -2
Query: 652 FDSSRDRGKPFKFRIGKSEVIRGWDEGVA------KMSVGERAKLTCSPDYAYGQQ 503
FDS+ RG+P R+G +++RG ++G++ M VG + KL AYG +
Sbjct: 147 FDSTYKRGRPLTMRLGAGKILRGLEQGISGGGGVPPMLVGGKRKLMIPATLAYGPE 202
>12_01_0295 +
2235209-2235263,2236182-2236361,2236478-2236567,
2236947-2237131,2237200-2237358,2237437-2237589,
2237938-2238264
Length = 382
Score = 37.5 bits (83), Expect = 0.009
Identities = 23/83 (27%), Positives = 44/83 (53%), Gaps = 3/83 (3%)
Frame = -2
Query: 655 KFDSSRDRGKPFKFRIGKSEV-IRGWDEGVAKMSVGERAKLTCSPDYAYGQQGHPGV--I 485
KF+ + + +GK + + G GV+ M GERA L + + YG++G +
Sbjct: 91 KFEDTWQEQHSIELVLGKEKKEMTGLGIGVSNMRSGERALLHVNWELGYGKEGSFSFPNV 150
Query: 484 PPNSTLIFDVELLRLE*IQFVTK 416
PP + L+++VEL+ + ++ V +
Sbjct: 151 PPMADLVYEVELIGFDDVKEVPR 173
>01_05_0359 +
21350580-21350829,21350990-21351064,21351156-21351236,
21352633-21352830,21352930-21353019,21353096-21353253,
21353350-21353472,21354989-21355096,21355530-21355826
Length = 459
Score = 37.5 bits (83), Expect = 0.009
Identities = 22/70 (31%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
Frame = -2
Query: 652 FDSSRDRG-KPFKFRIGKSEVIRGWDEGVAKMSVGERAKLTCSPDYAYGQQGHPGVIPPN 476
FD +G +PF+F + + +V G +E V M GE + T P Q V+PP
Sbjct: 214 FDQRGHQGDEPFEFVVDEEQVSDGLEEAVLTMWEGEVSLFTIPPQCLQDQHV---VVPPG 270
Query: 475 STLIFDVELL 446
S++ +++EL+
Sbjct: 271 SSVTYEIELV 280
Score = 33.5 bits (73), Expect = 0.15
Identities = 20/48 (41%), Positives = 25/48 (52%), Gaps = 4/48 (8%)
Frame = -2
Query: 571 VAKMSVGERAKLTCSPDYAYGQQGHPGVIP----PNSTLIFDVELLRL 440
V+ M GE+A T P+ A + P IP PN L FDVEL+ L
Sbjct: 3 VSSMQAGEKAVFTIPPELAGTKSRCPADIPANLPPNQALQFDVELISL 50
>09_01_0020 +
413723-413738,413867-413934,414849-415144,415275-415400,
415484-415566,416514-416628,416755-416847,416963-417021,
417609-417684,417812-417901,418050-418202,418294-418480,
418752-418839,419077-419125,419233-419329
Length = 531
Score = 35.5 bits (78), Expect = 0.037
Identities = 18/42 (42%), Positives = 25/42 (59%)
Frame = -2
Query: 562 MSVGERAKLTCSPDYAYGQQGHPGVIPPNSTLIFDVELLRLE 437
M VG + +LT P YG P IP NS L+++VELL ++
Sbjct: 485 MRVGGKRRLTIPPAQGYGDVATPK-IPANSWLVYEVELLEVK 525
>07_01_0246 +
1809762-1809803,1810383-1810557,1810678-1810763,
1810871-1810921,1811003-1811146,1811299-1811343,
1811578-1811633,1811744-1811819,1811908-1812006
Length = 257
Score = 33.9 bits (74), Expect = 0.11
Identities = 15/51 (29%), Positives = 27/51 (52%)
Frame = -2
Query: 622 FKFRIGKSEVIRGWDEGVAKMSVGERAKLTCSPDYAYGQQGHPGVIPPNST 470
FKF+IG +VI ++E ++ M+ G ++ PD Y + + P +T
Sbjct: 173 FKFKIGSGQVIPAFEEAISDMAPGGVRRIIVPPDLGYPDNDYNKLGPKPTT 223
>01_05_0372 +
21541220-21541457,21541832-21541912,21542027-21542092,
21543050-21543178,21544619-21544674,21545451-21545732
Length = 283
Score = 33.5 bits (73), Expect = 0.15
Identities = 21/54 (38%), Positives = 27/54 (50%), Gaps = 4/54 (7%)
Frame = -2
Query: 562 MSVGERAKLTCSPDYAYGQQGHPGVIP----PNSTLIFDVELLRLE*IQFVTKN 413
M GERA T P A + G P IP P TL F++EL+ L I + +N
Sbjct: 1 MRPGERAIFTIPPKLAITKSGSPASIPSSIPPEQTLRFEIELISLFAITDILEN 54
Score = 29.5 bits (63), Expect = 2.5
Identities = 17/46 (36%), Positives = 22/46 (47%), Gaps = 5/46 (10%)
Frame = -2
Query: 571 VAKMSVGERAKLTCSPDYAYGQQGH-----PGVIPPNSTLIFDVEL 449
V M GE A P YA+G QG +PP++TL V+L
Sbjct: 112 VKTMREGEEAIFIVKPRYAFGAQGRDSTGDQAAVPPDATLYLYVQL 157
>08_01_0540 + 4691929-4692014,4692915-4693125,4693756-4693885,
4695422-4696072,4696179-4696395,4697040-4697111,
4697167-4697257,4697367-4698363,4698914-4699044,
4699584-4699802,4700110-4700805,4700912-4701121,
4701606-4701710
Length = 1271
Score = 28.3 bits (60), Expect = 5.7
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = -2
Query: 571 VAKMSVGERAKLTCSPDYAYGQQGHPGVIPPNSTL 467
+AK+ VGE + CSP+ +Y + H GVI +T+
Sbjct: 922 LAKLEVGEFCSV-CSPNCSYLTRKHLGVIASRATM 955
>05_04_0202 - 19010953-19013355
Length = 800
Score = 27.5 bits (58), Expect = 9.9
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = -2
Query: 583 WDEGVAKMSVGERAKLTCSPDYAYGQQGHP 494
+DEGV S+ A L +P Y +G+ HP
Sbjct: 251 YDEGVTAPSMRCFASLAIAPSYNWGRDRHP 280
>03_04_0162 + 17858802-17861168
Length = 788
Score = 27.5 bits (58), Expect = 9.9
Identities = 15/54 (27%), Positives = 27/54 (50%)
Frame = -2
Query: 607 GKSEVIRGWDEGVAKMSVGERAKLTCSPDYAYGQQGHPGVIPPNSTLIFDVELL 446
G + V+ + G+ +++V +T +YA G PN+T++FD LL
Sbjct: 449 GYTTVLEDYGPGMVQVTVAGGHNIT---EYARSSSSSAGGCKPNATVVFDNTLL 499
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,075,128
Number of Sequences: 37544
Number of extensions: 283113
Number of successful extensions: 614
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 575
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 594
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1644004708
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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