Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P04_pT_B11
(605 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
S57284-1|AAB25906.1| 437|Caenorhabditis elegans S-adenosylhomoc... 252 1e-67
M64306-1|AAA28062.1| 437|Caenorhabditis elegans S-adenosylhomoc... 252 1e-67
AF043699-5|AAB97565.1| 437|Caenorhabditis elegans Hypothetical ... 252 1e-67
Z97190-1|CAB10024.1| 1111|Caenorhabditis elegans Hypothetical pr... 30 1.5
U28941-3|AAM98025.1| 799|Caenorhabditis elegans Temporarily ass... 28 5.9
U28941-2|AAC71103.1| 1091|Caenorhabditis elegans Temporarily ass... 28 5.9
U28941-1|AAC71102.1| 1107|Caenorhabditis elegans Temporarily ass... 28 5.9
Z93378-3|CAB07585.3| 749|Caenorhabditis elegans Hypothetical pr... 27 7.9
>S57284-1|AAB25906.1| 437|Caenorhabditis elegans
S-adenosylhomocysteine hydrolase protein.
Length = 437
Score = 252 bits (617), Expect = 1e-67
Identities = 121/181 (66%), Positives = 141/181 (77%), Gaps = 4/181 (2%)
Frame = -1
Query: 605 MEGFQVTTMEEAAEVGXIFVTTTGXIDIICKEHLLRMKDDAIVCNIGHFDCEIDVAWLDN 426
MEG++VTT+EEAA I VTTTG DI+ +H + +DAIVCN+GHFDCEIDV WL+
Sbjct: 256 MEGYEVTTLEEAAPKANIIVTTTGCKDIVTGKHFELLPNDAIVCNVGHFDCEIDVKWLNT 315
Query: 425 NA-KKVNIKQHVDRYELENGNHIIVLAAGRLVNLGCATGHSSFVMSNSFTNQVLAQIELW 249
NA KK IK VDRY L+NG H+I+LA GRLVNLGCATGH SFVMSNSFTNQVLAQ+ELW
Sbjct: 316 NATKKDTIKPQVDRYTLKNGRHVILLAEGRLVNLGCATGHPSFVMSNSFTNQVLAQVELW 375
Query: 248 TKADT---YPIGVHTLPKKLDEEVAALHLDHLGVKLTKLTPKQAKYIGVSREGPYKPEHY 78
TK T Y +G++ LPK LDEEVA LHL LGVKLTKL+ +QA Y+GV GPYKP+HY
Sbjct: 376 TKFGTPQEYKLGLYVLPKTLDEEVAYLHLAQLGVKLTKLSDEQASYLGVPVAGPYKPDHY 435
Query: 77 R 75
R
Sbjct: 436 R 436
>M64306-1|AAA28062.1| 437|Caenorhabditis elegans
S-adenosylhomocysteine hydrolase protein.
Length = 437
Score = 252 bits (617), Expect = 1e-67
Identities = 121/181 (66%), Positives = 141/181 (77%), Gaps = 4/181 (2%)
Frame = -1
Query: 605 MEGFQVTTMEEAAEVGXIFVTTTGXIDIICKEHLLRMKDDAIVCNIGHFDCEIDVAWLDN 426
MEG++VTT+EEAA I VTTTG DI+ +H + +DAIVCN+GHFDCEIDV WL+
Sbjct: 256 MEGYEVTTLEEAAPKANIIVTTTGCKDIVTGKHFELLPNDAIVCNVGHFDCEIDVKWLNT 315
Query: 425 NA-KKVNIKQHVDRYELENGNHIIVLAAGRLVNLGCATGHSSFVMSNSFTNQVLAQIELW 249
NA KK IK VDRY L+NG H+I+LA GRLVNLGCATGH SFVMSNSFTNQVLAQ+ELW
Sbjct: 316 NATKKDTIKPQVDRYTLKNGRHVILLAEGRLVNLGCATGHPSFVMSNSFTNQVLAQVELW 375
Query: 248 TKADT---YPIGVHTLPKKLDEEVAALHLDHLGVKLTKLTPKQAKYIGVSREGPYKPEHY 78
TK T Y +G++ LPK LDEEVA LHL LGVKLTKL+ +QA Y+GV GPYKP+HY
Sbjct: 376 TKFGTPQEYKLGLYVLPKTLDEEVAYLHLAQLGVKLTKLSDEQASYLGVPVAGPYKPDHY 435
Query: 77 R 75
R
Sbjct: 436 R 436
>AF043699-5|AAB97565.1| 437|Caenorhabditis elegans Hypothetical
protein K02F2.2 protein.
Length = 437
Score = 252 bits (617), Expect = 1e-67
Identities = 121/181 (66%), Positives = 141/181 (77%), Gaps = 4/181 (2%)
Frame = -1
Query: 605 MEGFQVTTMEEAAEVGXIFVTTTGXIDIICKEHLLRMKDDAIVCNIGHFDCEIDVAWLDN 426
MEG++VTT+EEAA I VTTTG DI+ +H + +DAIVCN+GHFDCEIDV WL+
Sbjct: 256 MEGYEVTTLEEAAPKANIIVTTTGCKDIVTGKHFELLPNDAIVCNVGHFDCEIDVKWLNT 315
Query: 425 NA-KKVNIKQHVDRYELENGNHIIVLAAGRLVNLGCATGHSSFVMSNSFTNQVLAQIELW 249
NA KK IK VDRY L+NG H+I+LA GRLVNLGCATGH SFVMSNSFTNQVLAQ+ELW
Sbjct: 316 NATKKDTIKPQVDRYTLKNGRHVILLAEGRLVNLGCATGHPSFVMSNSFTNQVLAQVELW 375
Query: 248 TKADT---YPIGVHTLPKKLDEEVAALHLDHLGVKLTKLTPKQAKYIGVSREGPYKPEHY 78
TK T Y +G++ LPK LDEEVA LHL LGVKLTKL+ +QA Y+GV GPYKP+HY
Sbjct: 376 TKFGTPQEYKLGLYVLPKTLDEEVAYLHLAQLGVKLTKLSDEQASYLGVPVAGPYKPDHY 435
Query: 77 R 75
R
Sbjct: 436 R 436
>Z97190-1|CAB10024.1| 1111|Caenorhabditis elegans Hypothetical
protein H05G16.1 protein.
Length = 1111
Score = 29.9 bits (64), Expect = 1.5
Identities = 15/40 (37%), Positives = 24/40 (60%)
Frame = -1
Query: 269 LAQIELWTKADTYPIGVHTLPKKLDEEVAALHLDHLGVKL 150
LA +E+ + D Y + +H K +D AAL + HLG+K+
Sbjct: 222 LAMLEVARRCDFYGVKLHAA-KDIDGNDAALSVMHLGIKV 260
>U28941-3|AAM98025.1| 799|Caenorhabditis elegans Temporarily
assigned gene nameprotein 149, isoform d protein.
Length = 799
Score = 27.9 bits (59), Expect = 5.9
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = -1
Query: 200 LDEEVAALHLDHLGVKLTKLTPKQAKYIGVSRE 102
++EE+ +LH G KLTPK + SR+
Sbjct: 665 MEEEMLSLHEPETGSNKKKLTPKNPSFEATSRQ 697
>U28941-2|AAC71103.1| 1091|Caenorhabditis elegans Temporarily
assigned gene nameprotein 149, isoform a protein.
Length = 1091
Score = 27.9 bits (59), Expect = 5.9
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = -1
Query: 200 LDEEVAALHLDHLGVKLTKLTPKQAKYIGVSRE 102
++EE+ +LH G KLTPK + SR+
Sbjct: 665 MEEEMLSLHEPETGSNKKKLTPKNPSFEATSRQ 697
>U28941-1|AAC71102.1| 1107|Caenorhabditis elegans Temporarily
assigned gene nameprotein 149, isoform b protein.
Length = 1107
Score = 27.9 bits (59), Expect = 5.9
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = -1
Query: 200 LDEEVAALHLDHLGVKLTKLTPKQAKYIGVSRE 102
++EE+ +LH G KLTPK + SR+
Sbjct: 665 MEEEMLSLHEPETGSNKKKLTPKNPSFEATSRQ 697
>Z93378-3|CAB07585.3| 749|Caenorhabditis elegans Hypothetical
protein F19H8.4 protein.
Length = 749
Score = 27.5 bits (58), Expect = 7.9
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = -1
Query: 452 EIDVAWLDNNAKKVNIKQHVDRYELENGNHI 360
E D W D VN+K+ +D+ E E+G +
Sbjct: 324 EADSTWADTYKALVNLKKKMDKKEKESGARV 354
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,209,552
Number of Sequences: 27780
Number of extensions: 270920
Number of successful extensions: 636
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 610
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 630
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1300523034
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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