Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_pT_B09
         (727 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    24   1.4  
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    22   4.4  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    22   5.8  

>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 10/15 (66%), Positives = 12/15 (80%)
 Frame = -1

Query: 472 VFGRQYFLFVLSTIS 428
           ++G Q FLFVLST S
Sbjct: 231 IYGFQNFLFVLSTFS 245


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 8/28 (28%), Positives = 14/28 (50%)
 Frame = +1

Query: 202 DTWIRFVLNKLTNMCLFYFEDLQIRLII 285
           D W R+ L+ + N C F +      L++
Sbjct: 128 DFWHRYTLSFIENYCQFLYNCFHSTLLL 155


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = +1

Query: 208 WIRFVLNKLTNMCLFYFEDL 267
           W+ F+ N LTN+  + F+ +
Sbjct: 243 WLFFLANFLTNLLFWEFDQI 262


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 165,040
Number of Sequences: 336
Number of extensions: 3426
Number of successful extensions: 8
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19363530
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)