BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P04_pT_B09
(727 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT001587-1|AAN71342.1| 1162|Drosophila melanogaster RE26442p pro... 31 2.1
AE014296-423|AAF47621.2| 1162|Drosophila melanogaster CG5712-PA ... 31 2.1
AF177931-1|AAF33110.1| 1162|Drosophila melanogaster adenylyl cyc... 29 4.9
>BT001587-1|AAN71342.1| 1162|Drosophila melanogaster RE26442p
protein.
Length = 1162
Score = 30.7 bits (66), Expect = 2.1
Identities = 18/55 (32%), Positives = 31/55 (56%), Gaps = 6/55 (10%)
Frame = -1
Query: 682 GYNIYQA-----IKSCRYDEVFLFYIFTFLILQHVLA*ALFGTSCNFCY-INHSY 536
G N+Y A I + YD L+ I+ F+ + ++L + G++ FCY IN+S+
Sbjct: 143 GLNVYHATSHNDILNPIYDAYTLYAIYMFMPVPYLLQPFVLGSAVTFCYIINYSF 197
>AE014296-423|AAF47621.2| 1162|Drosophila melanogaster CG5712-PA
protein.
Length = 1162
Score = 30.7 bits (66), Expect = 2.1
Identities = 18/55 (32%), Positives = 31/55 (56%), Gaps = 6/55 (10%)
Frame = -1
Query: 682 GYNIYQA-----IKSCRYDEVFLFYIFTFLILQHVLA*ALFGTSCNFCY-INHSY 536
G N+Y A I + YD L+ I+ F+ + ++L + G++ FCY IN+S+
Sbjct: 143 GLNVYHATSHNDILNPIYDAYTLYAIYMFMPVPYLLQPFVLGSAVTFCYIINYSF 197
>AF177931-1|AAF33110.1| 1162|Drosophila melanogaster adenylyl
cyclase ACXD protein.
Length = 1162
Score = 29.5 bits (63), Expect = 4.9
Identities = 13/38 (34%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Frame = -1
Query: 646 YDEVFLFYIFTFLILQHVLA*ALFGTSCNFCY-INHSY 536
YD L+ I+ F+ + ++L + G++ FCY IN+S+
Sbjct: 160 YDAYTLYAIYMFMPVPYLLQPFVLGSAVTFCYIINYSF 197
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,560,977
Number of Sequences: 53049
Number of extensions: 500146
Number of successful extensions: 1081
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1072
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1081
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3252477558
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -