BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P04_pT_B09
(727 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex det... 25 0.73
DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex det... 25 0.73
DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex det... 25 0.73
DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex det... 25 0.73
DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex det... 25 0.73
DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex det... 25 0.73
DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex det... 25 0.73
DQ201783-1|ABB05503.1| 381|Apis mellifera capa receptor-like GP... 24 1.7
DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex det... 23 2.2
DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex det... 22 5.1
DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex det... 22 5.1
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 22 5.1
DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex det... 22 6.8
DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex det... 22 6.8
DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex det... 22 6.8
DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex det... 22 6.8
DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex det... 22 6.8
DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex det... 22 6.8
DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex det... 22 6.8
DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex det... 22 6.8
DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex det... 22 6.8
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 22 6.8
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 22 6.8
>DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 25.0 bits (52), Expect = 0.73
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +1
Query: 517 SSNSILSNYD*YNKNYRMSQKGLK 588
S+N SNY+ YN NY + K L+
Sbjct: 86 SNNYKYSNYNNYNNNYNTNYKKLQ 109
>DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 25.0 bits (52), Expect = 0.73
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +1
Query: 517 SSNSILSNYD*YNKNYRMSQKGLK 588
S+N SNY+ YN NY + K L+
Sbjct: 86 SNNYKYSNYNNYNNNYNTNYKKLQ 109
>DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 25.0 bits (52), Expect = 0.73
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +1
Query: 517 SSNSILSNYD*YNKNYRMSQKGLK 588
S+N SNY+ YN NY + K L+
Sbjct: 86 SNNYKYSNYNNYNNNYNTNYKKLQ 109
>DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 25.0 bits (52), Expect = 0.73
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +1
Query: 517 SSNSILSNYD*YNKNYRMSQKGLK 588
S+N SNY+ YN NY + K L+
Sbjct: 86 SNNYKYSNYNNYNNNYNTNYKKLQ 109
>DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 25.0 bits (52), Expect = 0.73
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +1
Query: 517 SSNSILSNYD*YNKNYRMSQKGLK 588
S+N SNY+ YN NY + K L+
Sbjct: 86 SNNYKYSNYNNYNNNYNTNYKKLQ 109
>DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 25.0 bits (52), Expect = 0.73
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +1
Query: 517 SSNSILSNYD*YNKNYRMSQKGLK 588
S+N SNY+ YN NY + K L+
Sbjct: 86 SNNYKYSNYNNYNNNYNTNYKKLQ 109
>DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 25.0 bits (52), Expect = 0.73
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +1
Query: 517 SSNSILSNYD*YNKNYRMSQKGLK 588
S+N SNY+ YN NY + K L+
Sbjct: 86 SNNYKYSNYNNYNNNYNTNYKKLQ 109
>DQ201783-1|ABB05503.1| 381|Apis mellifera capa receptor-like GPCR
protein.
Length = 381
Score = 23.8 bits (49), Expect = 1.7
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +2
Query: 17 IQSNITLCTITLKINSGVLGTSFFTFS 97
I NIT CT+ +K + T+++ FS
Sbjct: 55 IFGNITTCTVIIKNPAMQTATNYYLFS 81
>DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 23.4 bits (48), Expect = 2.2
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +1
Query: 517 SSNSILSNYD*YNKNYRMSQKGL 585
S+N SNY+ YN NY K L
Sbjct: 86 SNNYNYSNYNNYNNNYNNYNKKL 108
>DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 22.2 bits (45), Expect = 5.1
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +1
Query: 517 SSNSILSNYD*YNKNY 564
S+N SNY+ YN NY
Sbjct: 86 SNNYKYSNYNNYNNNY 101
>DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 22.2 bits (45), Expect = 5.1
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +1
Query: 517 SSNSILSNYD*YNKNY 564
S+N SNY+ YN NY
Sbjct: 86 SNNYKYSNYNNYNNNY 101
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 22.2 bits (45), Expect = 5.1
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +1
Query: 517 SSNSILSNYD*YNKNY 564
S+N SNY+ YN NY
Sbjct: 319 SNNYKYSNYNNYNNNY 334
Score = 22.2 bits (45), Expect = 5.1
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +1
Query: 523 NSILSNYD*YNKNYRMSQKGL 585
N+ +NY+ YN NY + K L
Sbjct: 331 NNNYNNYNNYNNNYNNNYKKL 351
>DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.8 bits (44), Expect = 6.8
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = +1
Query: 535 SNYD*YNKNYRMSQKGLK 588
+NY+ YN NY + K L+
Sbjct: 96 NNYNNYNNNYNTNYKKLQ 113
Score = 21.4 bits (43), Expect = 9.0
Identities = 8/19 (42%), Positives = 15/19 (78%)
Frame = +1
Query: 508 LV*SSNSILSNYD*YNKNY 564
++ ++NS+ +NY+ YN NY
Sbjct: 81 IISNNNSLSNNYN-YNNNY 98
>DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 6.8
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = +1
Query: 508 LV*SSNSILSNYD*YNKNYRMSQK 579
++ ++NS+ +NY+ YN NY K
Sbjct: 81 IISNNNSLSNNYN-YNNNYNNYNK 103
>DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 6.8
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = +1
Query: 508 LV*SSNSILSNYD*YNKNYRMSQK 579
++ ++NS+ +NY+ YN NY K
Sbjct: 81 IISNNNSLSNNYN-YNNNYNNYNK 103
>DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 6.8
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = +1
Query: 508 LV*SSNSILSNYD*YNKNYRMSQK 579
++ ++NS+ +NY+ YN NY K
Sbjct: 81 IISNNNSLSNNYN-YNNNYNNYNK 103
>DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 6.8
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = +1
Query: 508 LV*SSNSILSNYD*YNKNYRMSQK 579
++ ++NS+ +NY+ YN NY K
Sbjct: 81 IISNNNSLSNNYN-YNNNYNNYNK 103
>DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 6.8
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = +1
Query: 508 LV*SSNSILSNYD*YNKNYRMSQK 579
++ ++NS+ +NY+ YN NY K
Sbjct: 81 IISNNNSLSNNYN-YNNNYNNYNK 103
>DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 6.8
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = +1
Query: 508 LV*SSNSILSNYD*YNKNYRMSQK 579
++ ++NS+ +NY+ YN NY K
Sbjct: 81 IISNNNSLSNNYN-YNNNYNNYNK 103
>DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 6.8
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = +1
Query: 508 LV*SSNSILSNYD*YNKNYRMSQK 579
++ ++NS+ +NY+ YN NY K
Sbjct: 81 IISNNNSLSNNYN-YNNNYNNYNK 103
>DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 6.8
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = +1
Query: 508 LV*SSNSILSNYD*YNKNYRMSQK 579
++ ++NS+ +NY+ YN NY K
Sbjct: 81 IISNNNSLSNNYN-YNNNYNNYNK 103
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 21.8 bits (44), Expect = 6.8
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = +1
Query: 508 LV*SSNSILSNYD*YNKNYRMSQK 579
++ ++NS+ +NY+ YN NY K
Sbjct: 314 IISNNNSLSNNYN-YNNNYNNYNK 336
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 21.8 bits (44), Expect = 6.8
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = +1
Query: 508 LV*SSNSILSNYD*YNKNYRMSQK 579
++ ++NS+ +NY+ YN NY K
Sbjct: 314 IISNNNSLSNNYN-YNNNYNNYNK 336
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 186,516
Number of Sequences: 438
Number of extensions: 3861
Number of successful extensions: 28
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22535775
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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