Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_pT_B08
         (533 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_01_0324 - 2357432-2357724,2358042-2358105,2358321-2358404,235...    30   1.0  
03_05_0127 + 21069312-21069668,21070023-21072830,21072975-21073178     29   3.1  
08_02_1336 - 26233081-26233312,26233814-26234672,26235218-26236736     27   9.5  

>06_01_0324 -
           2357432-2357724,2358042-2358105,2358321-2358404,
           2358638-2358715,2359298-2359360,2359459-2359561,
           2359675-2359800,2360212-2360258,2361284-2361388,
           2361483-2361605,2361759-2361854,2362052-2362141,
           2362759-2362815,2362899-2363028,2363613-2363708,
           2363815-2363875,2364391-2364490
          Length = 571

 Score = 30.3 bits (65), Expect = 1.0
 Identities = 16/37 (43%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
 Frame = +3

Query: 342 HFNFLMPAFFFKLCIRLFY-LFEYSHAHNVKISKLYN 449
           HF +++ A  FKLC+ + Y LFE  H H + I K  N
Sbjct: 90  HF-YVLYAHTFKLCLPIIYSLFEGLHDHVISIGKSVN 125


>03_05_0127 + 21069312-21069668,21070023-21072830,21072975-21073178
          Length = 1122

 Score = 28.7 bits (61), Expect = 3.1
 Identities = 19/70 (27%), Positives = 39/70 (55%)
 Frame = -2

Query: 472 NTYYILFLLYNFEILTLWA*EYSNK*NNRIHNLKKKAGIRKLKCLLHFNFHKNCNSYICN 293
           NT Y+   + NF  L+L     S+  +  ++++    GIR LK +++   ++ C+S + +
Sbjct: 526 NTQYLHETIGNFRYLSLVV-SSSDHTDVALNSVTIPGGIRILK-VVNAQDNRRCSSKLFS 583

Query: 292 RDINLKLPLQ 263
             IN+K+P +
Sbjct: 584 SSINVKIPTE 593


>08_02_1336 - 26233081-26233312,26233814-26234672,26235218-26236736
          Length = 869

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 13/39 (33%), Positives = 15/39 (38%)
 Frame = -2

Query: 334 HFNFHKNCNSYICNRDINLKLPLQHLSLQASTTT*HQVG 218
           H      CN + C R   +K P  H  L A     H VG
Sbjct: 214 HIMVCTGCNKHFCTRAEAMKKPYGHARLHAQKCEHHWVG 252


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,131,094
Number of Sequences: 37544
Number of extensions: 204113
Number of successful extensions: 315
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 313
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 315
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1190246000
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)