Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_pT_B07
         (596 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Triboliu...    24   0.85 
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    24   0.85 
U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I pr...    24   0.85 
AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    21   6.0  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    21   7.9  

>X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Tribolium
           castaneum mRNAfor alhpa amylase 3'region. ).
          Length = 489

 Score = 24.2 bits (50), Expect = 0.85
 Identities = 14/34 (41%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
 Frame = -3

Query: 249 SNARGRAKPLPTVPHCPXLFQ-LCTVNKYKDNQN 151
           S A    K  P VP+    F   CTVN Y+D  N
Sbjct: 129 SQADRDGKNYPAVPYGSGDFHDSCTVNNYQDASN 162


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 24.2 bits (50), Expect = 0.85
 Identities = 14/34 (41%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
 Frame = -3

Query: 249 SNARGRAKPLPTVPHCPXLFQ-LCTVNKYKDNQN 151
           S A    K  P VP+    F   CTVN Y+D  N
Sbjct: 130 SQADRDGKNYPAVPYGSGDFHDSCTVNNYQDASN 163


>U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I
           protein.
          Length = 490

 Score = 24.2 bits (50), Expect = 0.85
 Identities = 14/34 (41%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
 Frame = -3

Query: 249 SNARGRAKPLPTVPHCPXLFQ-LCTVNKYKDNQN 151
           S A    K  P VP+    F   CTVN Y+D  N
Sbjct: 130 SQADRDGKNYPAVPYGSGDFHDSCTVNNYQDASN 163


>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 7/17 (41%), Positives = 13/17 (76%)
 Frame = +1

Query: 31  KSHSQSVILSSHLKCPK 81
           K+H +S+I+++ L C K
Sbjct: 317 KAHQESIIMNNILPCVK 333


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 10/35 (28%), Positives = 20/35 (57%)
 Frame = -1

Query: 251 SAMPGAEPSRCLPYLIALXYFNYVL*INIKTIKMI 147
           + +PG  PS+ +P +I + + + +   NI+  K I
Sbjct: 180 TTIPGDLPSKDVPQMITITFDDAINNNNIELYKEI 214


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 126,826
Number of Sequences: 336
Number of extensions: 2649
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15039504
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)