Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_pT_B06
         (328 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    25   0.15 
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    25   0.15 
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    25   0.15 
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    25   0.15 
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    20   5.7  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    20   5.7  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    20   7.6  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    20   7.6  
AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein p...    20   7.6  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    20   7.6  

>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 25.4 bits (53), Expect = 0.15
 Identities = 11/26 (42%), Positives = 18/26 (69%)
 Frame = -2

Query: 123  REKVINPEDSEHNDPRQRKVDFISST 46
            R+ ++NP   E  D R+ +V+F+SST
Sbjct: 1206 RDDLVNPYWIEDPDVRKGEVEFLSST 1231


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 25.4 bits (53), Expect = 0.15
 Identities = 11/26 (42%), Positives = 18/26 (69%)
 Frame = -2

Query: 123  REKVINPEDSEHNDPRQRKVDFISST 46
            R+ ++NP   E  D R+ +V+F+SST
Sbjct: 1206 RDDLVNPYWIEDPDVRKGEVEFLSST 1231


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 25.4 bits (53), Expect = 0.15
 Identities = 11/26 (42%), Positives = 18/26 (69%)
 Frame = -2

Query: 123  REKVINPEDSEHNDPRQRKVDFISST 46
            R+ ++NP   E  D R+ +V+F+SST
Sbjct: 1206 RDDLVNPYWIEDPDVRKGEVEFLSST 1231


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 25.4 bits (53), Expect = 0.15
 Identities = 11/26 (42%), Positives = 18/26 (69%)
 Frame = -2

Query: 123  REKVINPEDSEHNDPRQRKVDFISST 46
            R+ ++NP   E  D R+ +V+F+SST
Sbjct: 1206 RDDLVNPYWIEDPDVRKGEVEFLSST 1231


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 20.2 bits (40), Expect = 5.7
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = -3

Query: 272  PDGTPVKFTYTADENGYQPQSELLP 198
            P  T +K T T    GY+PQ  +LP
Sbjct: 2210 PKPTTMKPTTTI---GYEPQEPVLP 2231


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 20.2 bits (40), Expect = 5.7
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +3

Query: 9   HLTIDVIDIDNVWC 50
           HL   VI + N+WC
Sbjct: 122 HLLFLVIFVLNIWC 135


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 19.8 bits (39), Expect = 7.6
 Identities = 5/18 (27%), Positives = 10/18 (55%)
 Frame = -1

Query: 91  AQRPPPKKSGLYFEHHTL 38
           ++  PP    +Y+ H T+
Sbjct: 53  SEETPPSPQEVYYHHQTI 70


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 19.8 bits (39), Expect = 7.6
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = -1

Query: 220 NHRVSYFQL 194
           NHR SYF+L
Sbjct: 29  NHRESYFRL 37


>AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein
           protein.
          Length = 210

 Score = 19.8 bits (39), Expect = 7.6
 Identities = 5/18 (27%), Positives = 10/18 (55%)
 Frame = -1

Query: 91  AQRPPPKKSGLYFEHHTL 38
           ++  PP    +Y+ H T+
Sbjct: 53  SEETPPSPQEVYYHHQTI 70


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 19.8 bits (39), Expect = 7.6
 Identities = 5/18 (27%), Positives = 10/18 (55%)
 Frame = -1

Query: 91  AQRPPPKKSGLYFEHHTL 38
           ++  PP    +Y+ H T+
Sbjct: 53  SEETPPSPQEVYYHHQTI 70


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 78,044
Number of Sequences: 336
Number of extensions: 1492
Number of successful extensions: 15
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used:  6261139
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)