Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_pT_B04
         (685 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D42045-1|BAA07646.2| 1044|Homo sapiens KIAA0086 protein.               31   2.9  
DQ871600-1|ABI49507.1|  496|Homo sapiens DCLRE1A protein.              31   2.9  
BC062582-1|AAH62582.1| 1040|Homo sapiens DNA cross-link repair 1...    31   2.9  
BC013124-1|AAH13124.1| 1040|Homo sapiens DNA cross-link repair 1...    31   2.9  
AY607842-1|AAT09762.1| 1040|Homo sapiens DNA cross-link repair 1...    31   2.9  
AL592546-2|CAI12637.1| 1040|Homo sapiens DNA cross-link repair 1...    31   2.9  
M99063-1|AAA35746.1|  638|Homo sapiens cytokeratin 2 protein.          30   6.7  
BC109235-1|AAI09236.1|  665|Homo sapiens dual specificity phosph...    30   6.7  
BC109234-1|AAI09235.1|  665|Homo sapiens dual specificity phosph...    30   6.7  
BC042101-1|AAH42101.1|  662|Homo sapiens DUSP16 protein protein.       30   6.7  
AY038927-1|AAK69770.1|  143|Homo sapiens truncated MAPK phosphat...    30   6.7  
AK055973-1|BAB71060.1|  665|Homo sapiens protein ( Homo sapiens ...    30   6.7  
AJ564103-1|CAD91891.1|  638|Homo sapiens keratin 2p protein.           30   6.7  
AF506796-1|AAN75120.1|  665|Homo sapiens dual specificity phosph...    30   6.7  
AB052156-1|BAB40814.1|  665|Homo sapiens MAPK phosphatase-7 prot...    30   6.7  
AB051487-1|BAB21791.1|  690|Homo sapiens KIAA1700 protein protein.     30   6.7  

>D42045-1|BAA07646.2| 1044|Homo sapiens KIAA0086 protein.
          Length = 1044

 Score = 31.5 bits (68), Expect = 2.9
 Identities = 23/69 (33%), Positives = 29/69 (42%)
 Frame = -3

Query: 374 ELKSHIKEALETNCAKCTKAQKGGTEKMIGHLINHEAEFWEELKAKYDPTNEFTKKYETE 195
           EL S   +  +  C K    Q+G  +K   HLIN E+E     K K      FTK     
Sbjct: 629 ELSSERSQRQKKRCRKSNSLQEGACQKRSDHLINTESEAVNLSKVKV-----FTKSAHGG 683

Query: 194 LKRVTA*IP 168
           L+R    IP
Sbjct: 684 LQRGNKKIP 692


>DQ871600-1|ABI49507.1|  496|Homo sapiens DCLRE1A protein.
          Length = 496

 Score = 31.5 bits (68), Expect = 2.9
 Identities = 23/69 (33%), Positives = 29/69 (42%)
 Frame = -3

Query: 374 ELKSHIKEALETNCAKCTKAQKGGTEKMIGHLINHEAEFWEELKAKYDPTNEFTKKYETE 195
           EL S   +  +  C K    Q+G  +K   HLIN E+E     K K      FTK     
Sbjct: 433 ELSSERSQRQKKRCRKSNSLQEGACQKRSDHLINTESEAVNLSKVKV-----FTKSAHGG 487

Query: 194 LKRVTA*IP 168
           L+R    IP
Sbjct: 488 LQRGNKKIP 496


>BC062582-1|AAH62582.1| 1040|Homo sapiens DNA cross-link repair 1A
           (PSO2 homolog, S. cerevisiae) protein.
          Length = 1040

 Score = 31.5 bits (68), Expect = 2.9
 Identities = 23/69 (33%), Positives = 29/69 (42%)
 Frame = -3

Query: 374 ELKSHIKEALETNCAKCTKAQKGGTEKMIGHLINHEAEFWEELKAKYDPTNEFTKKYETE 195
           EL S   +  +  C K    Q+G  +K   HLIN E+E     K K      FTK     
Sbjct: 625 ELSSERSQRQKKRCRKSNSLQEGACQKRSDHLINTESEAVNLSKVKV-----FTKSAHGG 679

Query: 194 LKRVTA*IP 168
           L+R    IP
Sbjct: 680 LQRGNKKIP 688


>BC013124-1|AAH13124.1| 1040|Homo sapiens DNA cross-link repair 1A
           (PSO2 homolog, S. cerevisiae) protein.
          Length = 1040

 Score = 31.5 bits (68), Expect = 2.9
 Identities = 23/69 (33%), Positives = 29/69 (42%)
 Frame = -3

Query: 374 ELKSHIKEALETNCAKCTKAQKGGTEKMIGHLINHEAEFWEELKAKYDPTNEFTKKYETE 195
           EL S   +  +  C K    Q+G  +K   HLIN E+E     K K      FTK     
Sbjct: 625 ELSSERSQRQKKRCRKSNSLQEGACQKRSDHLINTESEAVNLSKVKV-----FTKSAHGG 679

Query: 194 LKRVTA*IP 168
           L+R    IP
Sbjct: 680 LQRGNKKIP 688


>AY607842-1|AAT09762.1| 1040|Homo sapiens DNA cross-link repair 1A
           (PSO2 homolog, S. cerevisiae) protein.
          Length = 1040

 Score = 31.5 bits (68), Expect = 2.9
 Identities = 23/69 (33%), Positives = 29/69 (42%)
 Frame = -3

Query: 374 ELKSHIKEALETNCAKCTKAQKGGTEKMIGHLINHEAEFWEELKAKYDPTNEFTKKYETE 195
           EL S   +  +  C K    Q+G  +K   HLIN E+E     K K      FTK     
Sbjct: 625 ELSSERSQRQKKRCRKSNSLQEGACQKRSDHLINTESEAVNLSKVKV-----FTKSAHGG 679

Query: 194 LKRVTA*IP 168
           L+R    IP
Sbjct: 680 LQRGNKKIP 688


>AL592546-2|CAI12637.1| 1040|Homo sapiens DNA cross-link repair 1A
           (PSO2 homolog, S. cerevisiae) protein.
          Length = 1040

 Score = 31.5 bits (68), Expect = 2.9
 Identities = 23/69 (33%), Positives = 29/69 (42%)
 Frame = -3

Query: 374 ELKSHIKEALETNCAKCTKAQKGGTEKMIGHLINHEAEFWEELKAKYDPTNEFTKKYETE 195
           EL S   +  +  C K    Q+G  +K   HLIN E+E     K K      FTK     
Sbjct: 625 ELSSERSQRQKKRCRKSNSLQEGACQKRSDHLINTESEAVNLSKVKV-----FTKSAHGG 679

Query: 194 LKRVTA*IP 168
           L+R    IP
Sbjct: 680 LQRGNKKIP 688


>M99063-1|AAA35746.1|  638|Homo sapiens cytokeratin 2 protein.
          Length = 638

 Score = 30.3 bits (65), Expect = 6.7
 Identities = 14/40 (35%), Positives = 20/40 (50%)
 Frame = -3

Query: 296 KMIGHLINHEAEFWEELKAKYDPTNEFTKKYETELKRVTA 177
           K +  L+        ELK+  D   +F KKYE E+ + TA
Sbjct: 243 KQLDSLLGERGNLEGELKSMQDLVEDFKKKYEDEINKRTA 282


>BC109235-1|AAI09236.1|  665|Homo sapiens dual specificity
           phosphatase 16 protein.
          Length = 665

 Score = 30.3 bits (65), Expect = 6.7
 Identities = 14/35 (40%), Positives = 20/35 (57%)
 Frame = -3

Query: 365 SHIKEALETNCAKCTKAQKGGTEKMIGHLINHEAE 261
           SHI EA+  NC+K  K +    + +I  LI H A+
Sbjct: 40  SHILEAININCSKLMKRRLQQDKVLITELIQHSAK 74


>BC109234-1|AAI09235.1|  665|Homo sapiens dual specificity
           phosphatase 16 protein.
          Length = 665

 Score = 30.3 bits (65), Expect = 6.7
 Identities = 14/35 (40%), Positives = 20/35 (57%)
 Frame = -3

Query: 365 SHIKEALETNCAKCTKAQKGGTEKMIGHLINHEAE 261
           SHI EA+  NC+K  K +    + +I  LI H A+
Sbjct: 40  SHILEAININCSKLMKRRLQQDKVLITELIQHSAK 74


>BC042101-1|AAH42101.1|  662|Homo sapiens DUSP16 protein protein.
          Length = 662

 Score = 30.3 bits (65), Expect = 6.7
 Identities = 14/35 (40%), Positives = 20/35 (57%)
 Frame = -3

Query: 365 SHIKEALETNCAKCTKAQKGGTEKMIGHLINHEAE 261
           SHI EA+  NC+K  K +    + +I  LI H A+
Sbjct: 40  SHILEAININCSKLMKRRLQQDKVLITELIQHSAK 74


>AY038927-1|AAK69770.1|  143|Homo sapiens truncated MAPK phosphatase
           7 protein.
          Length = 143

 Score = 30.3 bits (65), Expect = 6.7
 Identities = 14/35 (40%), Positives = 20/35 (57%)
 Frame = -3

Query: 365 SHIKEALETNCAKCTKAQKGGTEKMIGHLINHEAE 261
           SHI EA+  NC+K  K +    + +I  LI H A+
Sbjct: 40  SHILEAININCSKLMKRRLQQDKVLITELIQHSAK 74


>AK055973-1|BAB71060.1|  665|Homo sapiens protein ( Homo sapiens
           cDNA FLJ31411 fis, clone NT2NE2000214, moderately
           similar to DUAL SPECIFICITY PROTEIN PHOSPHATASE 8 (EC
           3.1.3.48). ).
          Length = 665

 Score = 30.3 bits (65), Expect = 6.7
 Identities = 14/35 (40%), Positives = 20/35 (57%)
 Frame = -3

Query: 365 SHIKEALETNCAKCTKAQKGGTEKMIGHLINHEAE 261
           SHI EA+  NC+K  K +    + +I  LI H A+
Sbjct: 40  SHILEAININCSKLMKRRLQQDKVLITELIQHSAK 74


>AJ564103-1|CAD91891.1|  638|Homo sapiens keratin 2p protein.
          Length = 638

 Score = 30.3 bits (65), Expect = 6.7
 Identities = 14/40 (35%), Positives = 20/40 (50%)
 Frame = -3

Query: 296 KMIGHLINHEAEFWEELKAKYDPTNEFTKKYETELKRVTA 177
           K +  L+        ELK+  D   +F KKYE E+ + TA
Sbjct: 243 KQLDSLLGERGNLEGELKSMQDLVEDFKKKYEDEINKRTA 282


>AF506796-1|AAN75120.1|  665|Homo sapiens dual specificity
           phosphatase 16 protein.
          Length = 665

 Score = 30.3 bits (65), Expect = 6.7
 Identities = 14/35 (40%), Positives = 20/35 (57%)
 Frame = -3

Query: 365 SHIKEALETNCAKCTKAQKGGTEKMIGHLINHEAE 261
           SHI EA+  NC+K  K +    + +I  LI H A+
Sbjct: 40  SHILEAININCSKLMKRRLQQDKVLITELIQHSAK 74


>AB052156-1|BAB40814.1|  665|Homo sapiens MAPK phosphatase-7
           protein.
          Length = 665

 Score = 30.3 bits (65), Expect = 6.7
 Identities = 14/35 (40%), Positives = 20/35 (57%)
 Frame = -3

Query: 365 SHIKEALETNCAKCTKAQKGGTEKMIGHLINHEAE 261
           SHI EA+  NC+K  K +    + +I  LI H A+
Sbjct: 40  SHILEAININCSKLMKRRLQQDKVLITELIQHSAK 74


>AB051487-1|BAB21791.1|  690|Homo sapiens KIAA1700 protein protein.
          Length = 690

 Score = 30.3 bits (65), Expect = 6.7
 Identities = 14/35 (40%), Positives = 20/35 (57%)
 Frame = -3

Query: 365 SHIKEALETNCAKCTKAQKGGTEKMIGHLINHEAE 261
           SHI EA+  NC+K  K +    + +I  LI H A+
Sbjct: 65  SHILEAININCSKLMKRRLQQDKVLITELIQHSAK 99


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,795,804
Number of Sequences: 237096
Number of extensions: 1976939
Number of successful extensions: 4082
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 3952
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4082
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7783251346
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)