Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P04_pT_A23
(779 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCP31B10.07 |eft202||translation elongation factor 2 |Schizosac... 272 5e-74
SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation elon... 272 5e-74
SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyce... 192 6e-50
SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr 3|||Ma... 111 1e-25
SPBC1306.01c ||SPBC409.22c|translation elongation factor G|Schiz... 46 5e-06
SPBC12D12.04c |pck2|sts6, pkc1|protein kinase C |Schizosaccharom... 29 0.57
SPAC227.18 |lys3|SPAC2F7.01|saccharopine dehydrogenase [NAD+, L-... 26 5.3
SPAC227.16c |||GINS complex subunit Psf3|Schizosaccharomyces pom... 26 5.3
SPBP23A10.13 |orc4|orp4|origin recognition complex subunit Orc4|... 26 7.0
SPAC1006.08 |etd1||ethanol-hypersensitive mutant protein |Schizo... 26 7.0
SPBC1734.15 |rsc4|brd1|RSC complex subunit Rsc4|Schizosaccharomy... 25 9.2
SPAC23H4.16c |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 25 9.2
SPAC11D3.15 |||oxoprolinase |Schizosaccharomyces pombe|chr 1|||M... 25 9.2
SPAC3C7.09 |set8||lysine methyltransferase Set8 |Schizosaccharom... 25 9.2
>SPCP31B10.07 |eft202||translation elongation factor 2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 842
Score = 272 bits (666), Expect = 5e-74
Identities = 127/218 (58%), Positives = 154/218 (70%)
Frame = -2
Query: 775 YDVTEARKIWCFGPEGTGPNILVDCSKGVQYLNEIKDSVVAGFQWAAKEGVMAEENLRGV 596
+DVT+ARKIWCFGP+ TG N++VD +K V YLNEIKDSVVA F WA+KEG M EENLR
Sbjct: 625 WDVTDARKIWCFGPDTTGANVVVDQTKAVAYLNEIKDSVVAAFAWASKEGPMFEENLRSC 684
Query: 595 RFNIYDVTLHTDAIHRGGGQIIPTTRRCLYACLLTAQPRLMEPVYLCEIQCPEVAVGGIY 416
RFNI DV LH DAIHRGGGQIIPT RR +YA L A P + EPV+L EIQ E A+GGIY
Sbjct: 685 RFNILDVVLHADAIHRGGGQIIPTARRVVYASTLLASPIIQEPVFLVEIQVSENAMGGIY 744
Query: 415 GVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQVL 236
VLN++RGHVF E Q GTP++ +KAYLPVNESFGFT +LR T GQAFPQ VFDHW +
Sbjct: 745 SVLNKKRGHVFSEEQRVGTPLYNIKAYLPVNESFGFTGELRQATAGQAFPQLVFDHWSPM 804
Query: 235 PWRPVRTSEQALQRCTGNEKEERIEGRSPRLNSIFGQI 122
P+ + + Q K + ++ P + ++
Sbjct: 805 SGDPLDPTSKPGQIVCEARKRKGLKENVPDYTEYYDRL 842
>SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation
elongation factor 2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 842
Score = 272 bits (666), Expect = 5e-74
Identities = 127/218 (58%), Positives = 154/218 (70%)
Frame = -2
Query: 775 YDVTEARKIWCFGPEGTGPNILVDCSKGVQYLNEIKDSVVAGFQWAAKEGVMAEENLRGV 596
+DVT+ARKIWCFGP+ TG N++VD +K V YLNEIKDSVVA F WA+KEG M EENLR
Sbjct: 625 WDVTDARKIWCFGPDTTGANVVVDQTKAVAYLNEIKDSVVAAFAWASKEGPMFEENLRSC 684
Query: 595 RFNIYDVTLHTDAIHRGGGQIIPTTRRCLYACLLTAQPRLMEPVYLCEIQCPEVAVGGIY 416
RFNI DV LH DAIHRGGGQIIPT RR +YA L A P + EPV+L EIQ E A+GGIY
Sbjct: 685 RFNILDVVLHADAIHRGGGQIIPTARRVVYASTLLASPIIQEPVFLVEIQVSENAMGGIY 744
Query: 415 GVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQVL 236
VLN++RGHVF E Q GTP++ +KAYLPVNESFGFT +LR T GQAFPQ VFDHW +
Sbjct: 745 SVLNKKRGHVFSEEQRVGTPLYNIKAYLPVNESFGFTGELRQATAGQAFPQLVFDHWSPM 804
Query: 235 PWRPVRTSEQALQRCTGNEKEERIEGRSPRLNSIFGQI 122
P+ + + Q K + ++ P + ++
Sbjct: 805 SGDPLDPTSKPGQIVCEARKRKGLKENVPDYTEYYDRL 842
>SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 983
Score = 192 bits (467), Expect = 6e-50
Identities = 90/192 (46%), Positives = 123/192 (64%), Gaps = 4/192 (2%)
Frame = -2
Query: 775 YDVTEARKIWCFGPEGTGPNILVDCSKGVQY----LNEIKDSVVAGFQWAAKEGVMAEEN 608
+D+ +R IW FGP+ G NIL D + LN +K+ + GFQW +EG + +E
Sbjct: 737 WDLLASRSIWAFGPDDRGTNILRDDTLSTDVDKNVLNSVKEYIKQGFQWGTREGPLCDET 796
Query: 607 LRGVRFNIYDVTLHTDAIHRGGGQIIPTTRRCLYACLLTAQPRLMEPVYLCEIQCPEVAV 428
+R V F + DV L + I+RGGGQIIPT RR Y+ LTA PRLMEPVY+ E+ P ++
Sbjct: 797 IRNVNFRLMDVVLAPEQIYRGGGQIIPTARRVCYSSFLTASPRLMEPVYMVEVHAPADSL 856
Query: 427 GGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDH 248
IY +L RRRGHV ++ G+P+++V+A +PV +S GF DLR +T GQA Q VFDH
Sbjct: 857 PIIYDLLTRRRGHVLQDIPRPGSPLYLVRALIPVIDSCGFETDLRVHTQGQAMCQMVFDH 916
Query: 247 WQVLPWRPVRTS 212
WQV+P P+ S
Sbjct: 917 WQVVPGDPLDKS 928
>SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr 3|||Manual
Length = 1000
Score = 111 bits (266), Expect = 1e-25
Identities = 68/207 (32%), Positives = 109/207 (52%), Gaps = 22/207 (10%)
Frame = -2
Query: 751 IWCFGPEGTGPNILVDCSKGVQYL-----------NEIKDSVVAGFQWAAKEGVMAEENL 605
I FGP+ GPNIL D +K ++ +++ + VV FQ +G + E +
Sbjct: 751 IIAFGPKRVGPNILFDKTKKMRDFRRQSDETKLIPSDLSEYVVTAFQLITHQGPLCAEPV 810
Query: 604 RGV-----RFNIYDVTLHTDAIHRGG----GQIIPTTRRCLYACLLTAQPRLMEPVYLCE 452
+G+ +F+I D + + + GQ+I + + L PRLM +Y C+
Sbjct: 811 QGICVSIDQFDISDDSEDSKLLTINNPQIPGQVISVVKESIRHGFLGWSPRLMLAMYSCD 870
Query: 451 IQCPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFGFTADLRSNTGGQA 272
+Q +G +YGV+++RRG V +E GTP FIVKA +PV ESFGF ++ T G A
Sbjct: 871 VQATSEVLGRVYGVVSKRRGRVIDEEMKEGTPFFIVKALIPVVESFGFAVEILKRTSGAA 930
Query: 271 FPQCVFDHWQVLPWRP--VRTSEQALQ 197
+PQ +F +++L P V T+E+ L+
Sbjct: 931 YPQLIFHGFEMLDENPFWVPTTEEELE 957
>SPBC1306.01c ||SPBC409.22c|translation elongation factor
G|Schizosaccharomyces pombe|chr 2|||Manual
Length = 770
Score = 46.4 bits (105), Expect = 5e-06
Identities = 30/125 (24%), Positives = 56/125 (44%)
Frame = -2
Query: 649 FQWAAKEGVMAEENLRGVRFNIYDVTLHTDAIHRGGGQIIPTTRRCLYACLLTAQPRLME 470
F A K+G + ++ RF + D H ++ T L A P ++E
Sbjct: 619 FYEALKKGFLIGHPIKNCRFVLEDGAYHPVDSSELAFRL--ATISAFRTAFLQANPMVLE 676
Query: 469 PVYLCEIQCPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFGFTADLRS 290
P+ I P GG+ G L++R+ + + F ++A +P+N F +++D+R+
Sbjct: 677 PIMNVSITAPVEHQGGVIGNLDKRKATIVDSD--TDEDEFTLQAEVPLNSMFSYSSDIRA 734
Query: 289 NTGGQ 275
T G+
Sbjct: 735 LTKGK 739
>SPBC12D12.04c |pck2|sts6, pkc1|protein kinase C
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1016
Score = 29.5 bits (63), Expect = 0.57
Identities = 14/47 (29%), Positives = 19/47 (40%)
Frame = +3
Query: 183 FPVQRCRACSEVRTGLQGRTCQWSNTHCGKACPPVLERKSAVKPNDS 323
+ + RC C E G C + C K C P + K K +DS
Sbjct: 414 YQIMRCALCGEFLKNAAGMQCIDCHYTCHKKCYPKVVTKCISKSSDS 460
>SPAC227.18 |lys3|SPAC2F7.01|saccharopine dehydrogenase [NAD+,
L-lysine forming] |Schizosaccharomyces pombe|chr
1|||Manual
Length = 368
Score = 26.2 bits (55), Expect = 5.3
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +3
Query: 522 VVGMIWPPPLWMASVWSVTS*MLNLTPRKFSSAITPSLAA 641
V G+ PPPL + S+ + + + + FS A+ PSL A
Sbjct: 305 VKGVTTPPPLEVISIDHLPTLLPRESSEAFSEALIPSLLA 344
>SPAC227.16c |||GINS complex subunit Psf3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 166
Score = 26.2 bits (55), Expect = 5.3
Identities = 13/47 (27%), Positives = 23/47 (48%)
Frame = +3
Query: 546 PLWMASVWSVTS*MLNLTPRKFSSAITPSLAAHWNPATTESLISLRY 686
P W+A V ++ S + P FSS + +L A+ N + + + Y
Sbjct: 43 PFWLAEVLAINSFVSIHMPAPFSSVVRNALKANPNSVSIRDITTHYY 89
>SPBP23A10.13 |orc4|orp4|origin recognition complex subunit
Orc4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 972
Score = 25.8 bits (54), Expect = 7.0
Identities = 12/32 (37%), Positives = 18/32 (56%), Gaps = 2/32 (6%)
Frame = -2
Query: 763 EARKIWCFGPEGTGPNILVD--CSKGVQYLNE 674
E + GP G+G ++LVD S+ Q +NE
Sbjct: 574 EGNSVIIVGPRGSGKSVLVDDILSRAAQEINE 605
>SPAC1006.08 |etd1||ethanol-hypersensitive mutant protein
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 391
Score = 25.8 bits (54), Expect = 7.0
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +2
Query: 524 CWNDLATTSMDGISMECYIIDVESNTTQI 610
CW++L+TTS + + II + TT I
Sbjct: 211 CWDELSTTSPESSKVSEPIIQDNTQTTHI 239
>SPBC1734.15 |rsc4|brd1|RSC complex subunit Rsc4|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 542
Score = 25.4 bits (53), Expect = 9.2
Identities = 17/67 (25%), Positives = 29/67 (43%), Gaps = 1/67 (1%)
Frame = -2
Query: 532 IPTTRRCLYACLLTAQPRLMEPVYL-CEIQCPEVAVGGIYGVLNRRRGHVFEESQVAGTP 356
IP T RC+ + + + P+L P L + CP + + V+ H F + P
Sbjct: 386 IPNTERCILSAFICSPPQLPLPNPLRMYLPCPSLNSTEV-SVITLAPQHSFLNIVINLNP 444
Query: 355 MFIVKAY 335
+K+Y
Sbjct: 445 ALALKSY 451
>SPAC23H4.16c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 328
Score = 25.4 bits (53), Expect = 9.2
Identities = 23/83 (27%), Positives = 39/83 (46%), Gaps = 7/83 (8%)
Frame = +2
Query: 446 LNFTKIYRLHKTGLSS*QTCVQASSSCWND-----LAT--TSMDGISMECYIIDVESNTT 604
L+++K++ LH +Q S S +ND LA ++ + + Y++ E +
Sbjct: 192 LSYSKVFFLH---------LLQHSDSSFNDKFLLLLANIPVTVSNVEVLLYLLQQEESLA 242
Query: 605 QILFSHNSFLSGPLESSHNRVLN 673
Q + SFL L S HN+V N
Sbjct: 243 QFDLNGKSFLYHMLVSLHNQVTN 265
>SPAC11D3.15 |||oxoprolinase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1317
Score = 25.4 bits (53), Expect = 9.2
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = -2
Query: 685 YLNEIKDSVVAGFQWAAKEGVMAEENLRGVR 593
YL+ + +AGFQ G+ ++N +GVR
Sbjct: 248 YLSPVVRRYLAGFQSGFLHGLKTKDNSKGVR 278
>SPAC3C7.09 |set8||lysine methyltransferase Set8
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 429
Score = 25.4 bits (53), Expect = 9.2
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = -3
Query: 309 LLPICVPTPADRPSRSAYSTIGRSXPGDPC 220
+LP+ + TPA P + YS G S C
Sbjct: 109 VLPLSINTPAQWPEKEVYSLQGTSIFNPVC 138
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,412,210
Number of Sequences: 5004
Number of extensions: 74847
Number of successful extensions: 189
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 174
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 184
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 377352472
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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