Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P04_pT_A23
(779 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical pr... 359 e-100
M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation fact... 356 9e-99
U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation fact... 200 1e-51
M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein. 196 2e-50
Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical pr... 79 4e-15
Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical pr... 44 2e-04
Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical pr... 42 5e-04
AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical ... 30 1.6
Z81449-2|CAD88214.1| 459|Caenorhabditis elegans Hypothetical pr... 29 4.9
Z81449-1|CAB03763.1| 473|Caenorhabditis elegans Hypothetical pr... 29 4.9
Z67882-3|CAA91800.2| 1324|Caenorhabditis elegans Hypothetical pr... 28 6.5
AL032631-7|CAB63337.2| 855|Caenorhabditis elegans Hypothetical ... 28 8.6
>Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical protein
F25H5.4 protein.
Length = 852
Score = 359 bits (884), Expect = e-100
Identities = 161/213 (75%), Positives = 183/213 (85%)
Frame = -2
Query: 775 YDVTEARKIWCFGPEGTGPNILVDCSKGVQYLNEIKDSVVAGFQWAAKEGVMAEENLRGV 596
YDVTEARKIWCFGP+GTGPN+L+D +KGVQYLNEIKDSVVAGFQWA +EGV+++EN+RGV
Sbjct: 635 YDVTEARKIWCFGPDGTGPNLLMDVTKGVQYLNEIKDSVVAGFQWATREGVLSDENMRGV 694
Query: 595 RFNIYDVTLHTDAIHRGGGQIIPTTRRCLYACLLTAQPRLMEPVYLCEIQCPEVAVGGIY 416
RFN++DVTLH DAIHRGGGQIIPT RR YA +LTA+PRL+EPVYL EIQCPE AVGGIY
Sbjct: 695 RFNVHDVTLHADAIHRGGGQIIPTARRVFYASVLTAEPRLLEPVYLVEIQCPEAAVGGIY 754
Query: 415 GVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQVL 236
GVLNRRRGHVFEESQV GTPMF+VKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQVL
Sbjct: 755 GVLNRRRGHVFEESQVTGTPMFVVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQVL 814
Query: 235 PWRPVRTSEQALQRCTGNEKEERIEGRSPRLNS 137
P P+ + Q K + ++ P L++
Sbjct: 815 PGDPLEAGTKPNQIVLDTRKRKGLKEGVPALDN 847
>M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation factor
protein.
Length = 852
Score = 356 bits (876), Expect = 9e-99
Identities = 160/213 (75%), Positives = 182/213 (85%)
Frame = -2
Query: 775 YDVTEARKIWCFGPEGTGPNILVDCSKGVQYLNEIKDSVVAGFQWAAKEGVMAEENLRGV 596
Y VTEARKIWCFGP+GTGPN+L+D +KGVQYLNEIKDSVVAGFQWA +EGV+++EN+RGV
Sbjct: 635 YAVTEARKIWCFGPDGTGPNLLMDVTKGVQYLNEIKDSVVAGFQWATREGVLSDENMRGV 694
Query: 595 RFNIYDVTLHTDAIHRGGGQIIPTTRRCLYACLLTAQPRLMEPVYLCEIQCPEVAVGGIY 416
RFN++DVTLH DAIHRGGGQIIPT RR YA +LTA+PRL+EPVYL EIQCPE AVGGIY
Sbjct: 695 RFNVHDVTLHADAIHRGGGQIIPTARRVFYASVLTAEPRLLEPVYLVEIQCPEAAVGGIY 754
Query: 415 GVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQVL 236
GVLNRRRGHVFEESQV GTPMF+VKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQVL
Sbjct: 755 GVLNRRRGHVFEESQVTGTPMFVVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQVL 814
Query: 235 PWRPVRTSEQALQRCTGNEKEERIEGRSPRLNS 137
P P+ + Q K + ++ P L++
Sbjct: 815 PGDPLEAGTKPNQIVLDTRKRKGLKEGVPALDN 847
>U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation factor
protein 1 protein.
Length = 974
Score = 200 bits (487), Expect = 1e-51
Identities = 90/192 (46%), Positives = 127/192 (66%), Gaps = 4/192 (2%)
Frame = -2
Query: 775 YDVTEARKIWCFGPEGTGPNILVDCSKGVQY----LNEIKDSVVAGFQWAAKEGVMAEEN 608
+D+ AR IW FGP+ TGPNIL+D + + L+ +++S+V GFQWA +EG + EE
Sbjct: 728 WDLLAARSIWAFGPDTTGPNILLDDTLPSEVDKHLLSTVRESLVQGFQWATREGPLCEEP 787
Query: 607 LRGVRFNIYDVTLHTDAIHRGGGQIIPTTRRCLYACLLTAQPRLMEPVYLCEIQCPEVAV 428
+R V+F + D + T+ ++RGGGQ+IPT RRC Y+ L A PRLMEP Y E+ P V
Sbjct: 788 IRQVKFKLLDAAIATEPLYRGGGQMIPTARRCAYSAFLMATPRLMEPYYTVEVVAPADCV 847
Query: 427 GGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDH 248
+Y VL +RRGHV ++ + G+PM+ + AY+PV +SFGF DLR +T GQAF F H
Sbjct: 848 AAVYTVLAKRRGHVTTDAPMPGSPMYTISAYIPVMDSFGFETDLRIHTQGQAFCMSAFHH 907
Query: 247 WQVLPWRPVRTS 212
WQ++P P+ S
Sbjct: 908 WQLVPGDPLDKS 919
>M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein.
Length = 849
Score = 196 bits (477), Expect = 2e-50
Identities = 89/192 (46%), Positives = 126/192 (65%), Gaps = 4/192 (2%)
Frame = -2
Query: 775 YDVTEARKIWCFGPEGTGPNILVDCSKGVQY----LNEIKDSVVAGFQWAAKEGVMAEEN 608
+D+ AR IW FG + TGPNIL+D + + L+ +++S+V GFQWA +EG + EE
Sbjct: 603 WDLLAARSIWAFGLDTTGPNILLDDTLPSEVDKHLLSTVRESLVQGFQWATREGPLCEEP 662
Query: 607 LRGVRFNIYDVTLHTDAIHRGGGQIIPTTRRCLYACLLTAQPRLMEPVYLCEIQCPEVAV 428
+R V+F + D + T+ ++RGGGQ+IPT RRC Y+ L A PRLMEP Y E+ P V
Sbjct: 663 IRQVKFKLLDAAIATEPLYRGGGQMIPTARRCAYSAFLMATPRLMEPYYTVEVVAPADCV 722
Query: 427 GGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDH 248
+Y VL +RRGHV ++ + G+PM+ + AY+PV +SFGF DLR +T GQAF F H
Sbjct: 723 AAVYTVLAKRRGHVTTDAPMPGSPMYTISAYIPVMDSFGFETDLRIHTQGQAFCMSAFHH 782
Query: 247 WQVLPWRPVRTS 212
WQ++P P+ S
Sbjct: 783 WQLVPGDPLDKS 794
>Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical protein
K10C3.5a protein.
Length = 894
Score = 79.0 bits (186), Expect = 4e-15
Identities = 56/192 (29%), Positives = 85/192 (44%), Gaps = 12/192 (6%)
Frame = -2
Query: 754 KIWCFGPEGTGPNILVDCSKGVQY----------LNEIKDSVVAGFQWAAKEGVMAEENL 605
+IW FGPE NIL + + + ++VAGF+ G + E +
Sbjct: 653 QIWAFGPERARANILFNNVQNYDRDSVWRKTEFGVRRYDQALVAGFELFCNTGPLCNEIM 712
Query: 604 RGVRFNI--YDVTLHTDAIHRGGGQIIPTTRRCLYACLLTAQPRLMEPVYLCEIQCPEVA 431
G+ + ++V AI GGQ++ + A RL+ +Y C + A
Sbjct: 713 HGIAVIVEEWNVDEEDGAI---GGQMMTAIKASCSAAAKKLALRLVAAMYRCTVTTASQA 769
Query: 430 VGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFGFTADLRSNTGGQAFPQCVFD 251
+G ++ VL++R+ V E T +F V + +PV ESF F LR T G A Q F
Sbjct: 770 LGKVHAVLSQRKSKVLSEDINEATNLFEVVSLMPVVESFSFCDQLRKFTSGMASAQLQFS 829
Query: 250 HWQVLPWRPVRT 215
HWQV+ P T
Sbjct: 830 HWQVIDEDPYWT 841
>Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical
protein K10C3.5b protein.
Length = 705
Score = 43.6 bits (98), Expect = 2e-04
Identities = 24/58 (41%), Positives = 28/58 (48%)
Frame = -2
Query: 388 VFEESQVAGTPMFIVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQVLPWRPVRT 215
V E T +F V + +PV ESF F LR T G A Q F HWQV+ P T
Sbjct: 595 VLSEDINEATNLFEVVSLMPVVESFSFCDQLRKFTSGMASAQLQFSHWQVIDEDPYWT 652
>Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical
protein F29C12.4 protein.
Length = 750
Score = 41.9 bits (94), Expect = 5e-04
Identities = 31/126 (24%), Positives = 53/126 (42%)
Frame = -2
Query: 652 GFQWAAKEGVMAEENLRGVRFNIYDVTLHTDAIHRGGGQIIPTTRRCLYACLLTAQPRLM 473
G EG + + + G+ I D + H A+ +I T + + A L+
Sbjct: 586 GLDAIVAEGPLIKSRIAGIHVRIQDGSTH--AVDSTEIAMINTMQNMMRESFEKANWLLL 643
Query: 472 EPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFGFTADLR 293
EP+ E P G + L +R + G I +A P+++ FG+T++LR
Sbjct: 644 EPIMKVEATVPTEFQGNVVTSLTQRNALITTTDSTEGYATVICEA--PLSDMFGYTSELR 701
Query: 292 SNTGGQ 275
S T G+
Sbjct: 702 SLTEGK 707
>AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical
protein Y119D3B.14 protein.
Length = 689
Score = 30.3 bits (65), Expect = 1.6
Identities = 25/95 (26%), Positives = 42/95 (44%), Gaps = 6/95 (6%)
Frame = -2
Query: 544 GGQIIPT-----TRRCLYACLLTAQPRLMEPVYLCEIQCP-EVAVGGIYGVLNRRRGHVF 383
GG+I P ++C+ L + + L EPV +I+ + I L RRR H
Sbjct: 565 GGKINPALLSACAQKCVSEALSSGEMVLTEPVMEVQIEIRNDDPTQPILNELLRRRAHFE 624
Query: 382 EESQVAGTPMFIVKAYLPVNESFGFTADLRSNTGG 278
T + + A LP++E+ + +R+ T G
Sbjct: 625 HSDATESTEIRRICAILPLSETENLSKTVRTLTSG 659
>Z81449-2|CAD88214.1| 459|Caenorhabditis elegans Hypothetical
protein C46F11.2b protein.
Length = 459
Score = 28.7 bits (61), Expect = 4.9
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = -3
Query: 675 KLRTLLWLDSSGPLRKELWLKRICVVLDST 586
K++TL+W PL KEL L+R+ V D +
Sbjct: 256 KVQTLIWAIGRDPLTKELNLERVGVKTDKS 285
>Z81449-1|CAB03763.1| 473|Caenorhabditis elegans Hypothetical
protein C46F11.2a protein.
Length = 473
Score = 28.7 bits (61), Expect = 4.9
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = -3
Query: 675 KLRTLLWLDSSGPLRKELWLKRICVVLDST 586
K++TL+W PL KEL L+R+ V D +
Sbjct: 270 KVQTLIWAIGRDPLTKELNLERVGVKTDKS 299
>Z67882-3|CAA91800.2| 1324|Caenorhabditis elegans Hypothetical protein
F22E10.2 protein.
Length = 1324
Score = 28.3 bits (60), Expect = 6.5
Identities = 13/49 (26%), Positives = 25/49 (51%)
Frame = -2
Query: 544 GGQIIPTTRRCLYACLLTAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRR 398
G Q + T RCL A +L + +M + + + A G ++ ++NR+
Sbjct: 1017 GDQTVDKTFRCLMAMMLCCEGIIMSAQFFPQFVGAKSAAGQMFNLINRQ 1065
>AL032631-7|CAB63337.2| 855|Caenorhabditis elegans Hypothetical
protein Y106G6H.5 protein.
Length = 855
Score = 27.9 bits (59), Expect = 8.6
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = +3
Query: 123 ICPNIELSLGDLPSI-LSSFSFPVQRCRACSEVRTGLQGRTCQWSNTHCGK 272
I P+ +GD+ + +SS FP RC+ E+ G+ S THCG+
Sbjct: 615 IGPSSRYLMGDITGLSMSSNDFPTFRCQ---EINIGMATGIRAISVTHCGE 662
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,217,964
Number of Sequences: 27780
Number of extensions: 439734
Number of successful extensions: 1219
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1145
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1214
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1882685842
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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