Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_pT_A14
         (381 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF026212-1|AAF99971.1|  807|Caenorhabditis elegans Hypothetical ...    29   1.5  
AF022968-5|AAB69885.2| 1080|Caenorhabditis elegans Adenylyl cycl...    28   2.6  
U64857-11|AAC25864.2|  313|Caenorhabditis elegans Hypothetical p...    27   4.5  

>AF026212-1|AAF99971.1|  807|Caenorhabditis elegans Hypothetical
           protein F52G3.3 protein.
          Length = 807

 Score = 28.7 bits (61), Expect = 1.5
 Identities = 17/61 (27%), Positives = 31/61 (50%), Gaps = 3/61 (4%)
 Frame = -2

Query: 227 FFFFHKLHFMQNIFYTLQYLPRYEIL---LLCIVATVVH*ISNSVAMYV*HSEHVADMYF 57
           FFFF+K+ F  + F+ L ++ ++ IL    +  +  V   IS +  +      H +D+ F
Sbjct: 388 FFFFYKIFFPNSKFHPLLFVFQHSILHFKFILKIIFVFRSISRNCGVQFFQKMHQSDLPF 447

Query: 56  G 54
           G
Sbjct: 448 G 448


>AF022968-5|AAB69885.2| 1080|Caenorhabditis elegans Adenylyl cyclase
           protein 2 protein.
          Length = 1080

 Score = 27.9 bits (59), Expect = 2.6
 Identities = 19/57 (33%), Positives = 30/57 (52%)
 Frame = -1

Query: 288 CVLSVLV*EINILWSYHYQ*FFFLS*VTFYAEYFLHVAIFTEI*NITTMHCCNCSSL 118
           C+ SV+  +  IL   H + FF ++     A + L VAI  +  N+ T+  C+C SL
Sbjct: 157 CIASVI--QFFIL-PRHRRIFFVVAVSWIVANFLLIVAINWDALNVNTLFMCSCLSL 210


>U64857-11|AAC25864.2|  313|Caenorhabditis elegans Hypothetical
           protein C37C3.9 protein.
          Length = 313

 Score = 27.1 bits (57), Expect = 4.5
 Identities = 10/25 (40%), Positives = 17/25 (68%)
 Frame = -1

Query: 99  NVCIALRACC*YVLWIVKKHYIDYI 25
           NVC  LR C  Y++  +K++ +DY+
Sbjct: 129 NVCTVLRLCDKYLMTNLKQNCVDYL 153


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,940,361
Number of Sequences: 27780
Number of extensions: 151426
Number of successful extensions: 330
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 327
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 330
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 567749674
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)