Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_pT_A12
         (754 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF067219-15|AAC17023.2|  802|Caenorhabditis elegans Hypothetical...    29   4.7  
Z81484-11|CAB03969.2|  365|Caenorhabditis elegans Hypothetical p...    28   6.2  
U61947-2|AAB03135.1|  498|Caenorhabditis elegans Hypothetical pr...    28   6.2  
Z81069-8|CAB02996.2|  600|Caenorhabditis elegans Hypothetical pr...    28   8.2  
AL021448-4|CAA16278.2|  600|Caenorhabditis elegans Hypothetical ...    28   8.2  

>AF067219-15|AAC17023.2|  802|Caenorhabditis elegans Hypothetical
           protein R12E2.2 protein.
          Length = 802

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 10/19 (52%), Positives = 16/19 (84%)
 Frame = +3

Query: 675 SLPSLPRNDPVLPSDGSTD 731
           SLP  P+++P+LP+ GST+
Sbjct: 462 SLPPKPKSEPILPAGGSTN 480


>Z81484-11|CAB03969.2|  365|Caenorhabditis elegans Hypothetical
           protein C47A10.4 protein.
          Length = 365

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 15/32 (46%), Positives = 19/32 (59%)
 Frame = -3

Query: 602 SD*HQASAGLDFEAVD*NYHYYFFALPTILSI 507
           SD  Q+ +GL F A    YHY FF + T+L I
Sbjct: 107 SDGLQSRSGLLFWAALLRYHYMFFGVHTLLCI 138


>U61947-2|AAB03135.1|  498|Caenorhabditis elegans Hypothetical
           protein C06G3.6 protein.
          Length = 498

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 14/52 (26%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
 Frame = -1

Query: 727 VDPSEGN-TGSFLGKEGKDFEFSHIRNKVEFAECSANTNDDENPTDIKPLQD 575
           V+ +E N  GS    E    + + I   +E  ECS+ ++DD+   D   +++
Sbjct: 442 VETAESNYPGSIFSDEDSLSDLAEILKDIEEYECSSESSDDQEKDDFDVVEE 493


>Z81069-8|CAB02996.2|  600|Caenorhabditis elegans Hypothetical
           protein Y2H9A.4 protein.
          Length = 600

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 21/60 (35%), Positives = 26/60 (43%), Gaps = 1/60 (1%)
 Frame = +3

Query: 546 IISVYSFEIQSCRGLMSVGFSSSFVLAEHSANSTLF-LM*ENSKSLPSLPRNDPVLPSDG 722
           ++S Y F   SC G    GF     L       TLF L+  N K    +P +DP  P DG
Sbjct: 146 VLSFYLFLAMSCFGACRSGFIKFICLP-----ITLFKLIFYNQKGYIPIPSSDPENPPDG 200


>AL021448-4|CAA16278.2|  600|Caenorhabditis elegans Hypothetical
           protein Y2H9A.4 protein.
          Length = 600

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 21/60 (35%), Positives = 26/60 (43%), Gaps = 1/60 (1%)
 Frame = +3

Query: 546 IISVYSFEIQSCRGLMSVGFSSSFVLAEHSANSTLF-LM*ENSKSLPSLPRNDPVLPSDG 722
           ++S Y F   SC G    GF     L       TLF L+  N K    +P +DP  P DG
Sbjct: 146 VLSFYLFLAMSCFGACRSGFIKFICLP-----ITLFKLIFYNQKGYIPIPSSDPENPPDG 200


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,247,328
Number of Sequences: 27780
Number of extensions: 306889
Number of successful extensions: 680
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 665
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 680
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1788025660
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)