Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P04_pT_A08
(771 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41557-3|AAA83304.1| 415|Caenorhabditis elegans Hypothetical pr... 167 8e-42
Z68004-1|CAA91981.1| 435|Caenorhabditis elegans Hypothetical pr... 142 2e-34
Z22179-9|CAD90178.1| 428|Caenorhabditis elegans Hypothetical pr... 33 0.30
Z22179-8|CAA80170.2| 431|Caenorhabditis elegans Hypothetical pr... 33 0.30
Z22179-7|CAA80167.2| 429|Caenorhabditis elegans Hypothetical pr... 33 0.30
Z84574-5|CAB06541.1| 846|Caenorhabditis elegans Hypothetical pr... 31 0.69
AL117195-11|CAB55019.1| 185|Caenorhabditis elegans Hypothetical... 31 0.91
Z95559-15|CAB63361.1| 917|Caenorhabditis elegans Hypothetical p... 29 4.8
U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical pr... 28 8.5
U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical pr... 28 8.5
>U41557-3|AAA83304.1| 415|Caenorhabditis elegans Hypothetical
protein C50F7.4 protein.
Length = 415
Score = 167 bits (406), Expect = 8e-42
Identities = 77/134 (57%), Positives = 103/134 (76%)
Frame = -2
Query: 770 DPREREANSLNXVYIEMDGSIGCMVNGAGLAMATMDIITLNGGKPANFLDLGGGVGQSQV 591
DPRE +A+ N YI MDG+I C+VNGAGLAMATMD+I L+GG+PANFLD+GG V + V
Sbjct: 267 DPREVDAHQFNLNYIGMDGNIACLVNGAGLAMATMDLIKLHGGEPANFLDVGGAVTEDAV 326
Query: 590 SAALKILESDPKVKTIFVNVFGGIVNCATIANGIVSACRENPPKHPLVIRLEGTNSGEAR 411
A++I+ SDP+VK + +N+FGGIVNCATIANG+VSA + P+V+RLEGTN A+
Sbjct: 327 FNAVRIITSDPRVKCVLINIFGGIVNCATIANGVVSAVNKIGLNVPMVVRLEGTNVDAAK 386
Query: 410 KILEQSGLPVKIIN 369
+I+++SGL + N
Sbjct: 387 QIMKKSGLKILTAN 400
>Z68004-1|CAA91981.1| 435|Caenorhabditis elegans Hypothetical
protein F47B10.1 protein.
Length = 435
Score = 142 bits (345), Expect = 2e-34
Identities = 71/131 (54%), Positives = 91/131 (69%), Gaps = 1/131 (0%)
Frame = -2
Query: 770 DPREREANSLNXVYIEMDGSIGCMVNGAGLAMATMDIITLNGGKPANFLDLGGGVGQSQV 591
D E A + N YI +DG+IGCMVNGAGLAMATMDII L+GG+PANFLD+GGG QV
Sbjct: 269 DELEIRAAAANLNYIRLDGTIGCMVNGAGLAMATMDIIKLHGGEPANFLDVGGGATVEQV 328
Query: 590 SAALKILESD-PKVKTIFVNVFGGIVNCATIANGIVSACRENPPKHPLVIRLEGTNSGEA 414
+ A KI+ +D KV I VN+FGGI+ C IA GI+ A RE K P+V+RL+GT +A
Sbjct: 329 TEAFKIITADKDKVSAILVNIFGGIMRCDVIAQGIIQAARELDLKIPIVVRLQGTKVEDA 388
Query: 413 RKILEQSGLPV 381
+ ++ S L +
Sbjct: 389 KALIATSQLRI 399
>Z22179-9|CAD90178.1| 428|Caenorhabditis elegans Hypothetical
protein F58A4.7c protein.
Length = 428
Score = 32.7 bits (71), Expect = 0.30
Identities = 15/32 (46%), Positives = 23/32 (71%)
Frame = +1
Query: 640 LPPFSVMISIVAMASPAPLTMXPILPSISMYT 735
LPP SV IS ++++P+PLT PI+ S ++ T
Sbjct: 317 LPPISVEISSPSLSTPSPLTAAPIIFSTAVPT 348
>Z22179-8|CAA80170.2| 431|Caenorhabditis elegans Hypothetical
protein F58A4.7b protein.
Length = 431
Score = 32.7 bits (71), Expect = 0.30
Identities = 15/32 (46%), Positives = 23/32 (71%)
Frame = +1
Query: 640 LPPFSVMISIVAMASPAPLTMXPILPSISMYT 735
LPP SV IS ++++P+PLT PI+ S ++ T
Sbjct: 319 LPPISVEISSPSLSTPSPLTAAPIIFSTAVPT 350
>Z22179-7|CAA80167.2| 429|Caenorhabditis elegans Hypothetical
protein F58A4.7a protein.
Length = 429
Score = 32.7 bits (71), Expect = 0.30
Identities = 15/32 (46%), Positives = 23/32 (71%)
Frame = +1
Query: 640 LPPFSVMISIVAMASPAPLTMXPILPSISMYT 735
LPP SV IS ++++P+PLT PI+ S ++ T
Sbjct: 317 LPPISVEISSPSLSTPSPLTAAPIIFSTAVPT 348
>Z84574-5|CAB06541.1| 846|Caenorhabditis elegans Hypothetical
protein F33E2.6 protein.
Length = 846
Score = 31.5 bits (68), Expect = 0.69
Identities = 18/67 (26%), Positives = 33/67 (49%)
Frame = +1
Query: 508 AQLTIPPKTLTKIVFTLGSDSKIFKAAETCDCPTPPPRSRKLAGLPPFSVMISIVAMASP 687
A +T+PP+T + ++ + + +T T PPR+ LPP +V + A +
Sbjct: 595 APMTVPPRTEPPMTEAPRTEVPMTEPPKTEPPRTAPPRTEVSMTLPPETVPPNTEAPRTE 654
Query: 688 APLTMXP 708
P+T+ P
Sbjct: 655 VPMTVPP 661
Score = 29.9 bits (64), Expect = 2.1
Identities = 27/98 (27%), Positives = 43/98 (43%), Gaps = 5/98 (5%)
Frame = +1
Query: 421 PELVPSSLMTRGCFGGFSLHAETIPFAMVAQLTIPPKT---LTKIVFTLGSDSKI--FKA 585
PE VP + ++ T P A T+PPKT +T++ T S +++ +
Sbjct: 641 PETVPPNTEAPRTEVPMTVPPRTEPPKTEAPRTVPPKTEAPMTEVPMTGPSRTEVPMTEP 700
Query: 586 AETCDCPTPPPRSRKLAGLPPFSVMISIVAMASPAPLT 699
+T T PPR+ LPP +V A + P+T
Sbjct: 701 PKTEQPRTAPPRTEVSMTLPPETVPPKTEAPRTEVPMT 738
>AL117195-11|CAB55019.1| 185|Caenorhabditis elegans Hypothetical
protein Y57A10A.16 protein.
Length = 185
Score = 31.1 bits (67), Expect = 0.91
Identities = 17/37 (45%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = -2
Query: 575 ILESDPKVKT-IFVNVFGGIVNCATIANGIVSACREN 468
++E DP V T I V G++NCA A GIV A E+
Sbjct: 112 LIEKDPMVNTYISVPRDKGVLNCAAFAAGIVEAILES 148
>Z95559-15|CAB63361.1| 917|Caenorhabditis elegans Hypothetical
protein Y41E3.11 protein.
Length = 917
Score = 28.7 bits (61), Expect = 4.8
Identities = 20/68 (29%), Positives = 31/68 (45%), Gaps = 3/68 (4%)
Frame = +1
Query: 514 LTIPPKTLTKIVFTLGSDSKIFKAAETCDCPT---PPPRSRKLAGLPPFSVMISIVAMAS 684
++IPP ++ +V + +F T P PPP AG+PP +M M++
Sbjct: 836 MSIPPPSM--MVQHMRQPPVVFPIDVTVPPPNFSAPPPMLPASAGIPPHLLMYHHHQMSA 893
Query: 685 PAPLTMXP 708
P P T P
Sbjct: 894 PPPPTTTP 901
>U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical
protein R144.4a protein.
Length = 360
Score = 27.9 bits (59), Expect = 8.5
Identities = 26/90 (28%), Positives = 38/90 (42%), Gaps = 10/90 (11%)
Frame = +1
Query: 523 PPKTLTKIVFTLGSDSKIFKAAETCD-CPTPPPR---------SRKLAGLPPFSVMISIV 672
PP T + + S + + T D P PPPR + A LPP S +
Sbjct: 240 PPPVPTPSIAQMSSRFQSPAISRTLDDAPPPPPRIASKTSVAPTSSRAPLPPSSSFAPSI 299
Query: 673 AMASPAPLTMXPILPSISMYTXLREFASLS 762
+ ASPAP P + S Y ++ A++S
Sbjct: 300 S-ASPAPAPPPPPPQAASPYPGMKSTATVS 328
>U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical
protein R144.4b protein.
Length = 362
Score = 27.9 bits (59), Expect = 8.5
Identities = 26/90 (28%), Positives = 38/90 (42%), Gaps = 10/90 (11%)
Frame = +1
Query: 523 PPKTLTKIVFTLGSDSKIFKAAETCD-CPTPPPR---------SRKLAGLPPFSVMISIV 672
PP T + + S + + T D P PPPR + A LPP S +
Sbjct: 242 PPPVPTPSIAQMSSRFQSPAISRTLDDAPPPPPRIASKTSVAPTSSRAPLPPSSSFAPSI 301
Query: 673 AMASPAPLTMXPILPSISMYTXLREFASLS 762
+ ASPAP P + S Y ++ A++S
Sbjct: 302 S-ASPAPAPPPPPPQAASPYPGMKSTATVS 330
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,251,576
Number of Sequences: 27780
Number of extensions: 363365
Number of successful extensions: 849
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 798
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 847
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1851132448
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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