Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P04_pT_A05
(620 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_06_0292 - 32886148-32886354,32886997-32887154,32887265-328873... 51 6e-07
03_06_0293 - 32889813-32890019,32890144-32890301,32891310-328914... 48 5e-06
07_01_0553 - 4119782-4119988,4120160-4120320,4120861-4121155 46 3e-05
07_01_0554 - 4121692-4121895,4121991-4122148,4123241-4123354,412... 42 3e-04
03_05_1105 + 30438140-30438350,30438448-30438926 40 0.001
05_04_0254 - 19444409-19444621,19444724-19444887,19444974-194450... 40 0.002
11_06_0192 + 21128298-21128829,21129341-21129407,21131169-211312... 38 0.006
07_01_0313 + 2216498-2216953 34 0.079
04_03_0630 - 18182681-18182931,18183397-18183463,18184899-181849... 34 0.10
01_06_0046 + 25943183-25943590 32 0.32
07_01_0312 + 2214050-2214556 31 0.74
07_01_0077 + 566895-567127,567207-567331,571204-571340,571437-57... 31 0.97
06_03_0526 + 21771519-21771607,21771685-21771810,21771890-217720... 31 0.97
05_03_0392 - 13432385-13432622,13432734-13433104 31 0.97
03_01_0092 - 731069-731434,731569-733080 31 0.97
12_02_0223 + 15868889-15869182 30 1.3
03_04_0042 - 16743440-16743454,16743907-16744002,16744257-167444... 30 1.3
11_02_0082 - 8088169-8088284,8088613-8088697,8090344-8090442,809... 29 2.3
02_05_0607 - 30315982-30316215,30316688-30316831,30316902-303169... 29 2.3
01_06_1153 - 34942608-34942975,34943082-34943330,34943516-349436... 29 2.3
11_01_0059 - 444991-446908,447595-448218,448431-448861,450974-45... 29 3.0
03_01_0417 - 3197956-3198438,3198550-3200001,3200116-3200277,320... 29 3.0
01_05_0710 + 24492337-24493053 29 3.0
11_06_0491 - 24298220-24299058,24299085-24299519,24299606-24299747 29 3.9
07_03_0561 + 19485218-19485242,19485323-19486467,19487354-194874... 29 3.9
02_01_0491 + 3548602-3548901 29 3.9
07_01_0979 - 8270980-8271654,8271984-8272088 28 5.2
07_01_0310 + 2209084-2209554 28 5.2
02_05_1147 - 34447519-34448042,34448126-34449092,34449458-344496... 28 5.2
01_06_1396 + 37014872-37015220,37015276-37015460,37015539-370158... 28 5.2
11_06_0492 - 24304313-24305263,24305375-24305721,24305793-24305931 28 6.9
08_02_1072 + 24114656-24114997,24115100-24115333,24115487-241155... 28 6.9
07_03_1398 - 26271034-26271131,26271314-26271425,26271750-262717... 28 6.9
03_06_0145 - 31973924-31975837 28 6.9
01_05_0650 + 23925913-23926025,23926128-23926388,23927431-239274... 28 6.9
11_06_0493 - 24310412-24311362,24311437-24311783,24311857-24311989 27 9.1
02_05_1322 - 35698314-35698322,35698537-35698619,35699685-35699823 27 9.1
02_01_0313 + 2097302-2097657,2099389-2100502 27 9.1
>03_06_0292 -
32886148-32886354,32886997-32887154,32887265-32887378,
32887660-32887924
Length = 247
Score = 51.2 bits (117), Expect = 6e-07
Identities = 38/133 (28%), Positives = 61/133 (45%), Gaps = 2/133 (1%)
Frame = -3
Query: 459 GPILMRAAWYTAGVVGGLSTIAV-CAPSGEFLNMRAPLAMGLGAV-FAASLAGMFLPPTX 286
G ++ +AA TA +V GL+ A G P V F ++ +FLP
Sbjct: 127 GTVIFQAAGMTAAIVIGLTCYTFWAAKRGYDFEFLGPFLFAATLVLFLYAIITIFLP--- 183
Query: 285 XXXXXXXXXXXXXXLIVFGGFLLYDTQSIIKRAEMHPPYGFKPYDPINSAISVYLDVLNI 106
++F GF++YDT ++IKR Y + Y + +AI++YLD++N+
Sbjct: 184 -MGRTGKLVYGCVAALIFSGFIIYDTDNLIKR------YTYDEY--VAAAITLYLDIINL 234
Query: 105 FMRIAMILSGAGG 67
FM + L A G
Sbjct: 235 FMALVTALQAADG 247
>03_06_0293 -
32889813-32890019,32890144-32890301,32891310-32891423,
32891531-32891777
Length = 241
Score = 48.4 bits (110), Expect = 5e-06
Identities = 41/141 (29%), Positives = 63/141 (44%), Gaps = 2/141 (1%)
Frame = -3
Query: 489 AVIAPICFLGGPILMRAAWYTAGVVGGLSTIAV-CAPSGEFLNMRAP-LAMGLGAVFAAS 316
AV + G ++ AA TA VV L+ A G N P L + + S
Sbjct: 111 AVGMTCAYTSGKVIFEAAALTAVVVISLTAYTFWAAKRGHDFNFLGPFLFSAVMVLILFS 170
Query: 315 LAGMFLPPTXXXXXXXXXXXXXXXLIVFGGFLLYDTQSIIKRAEMHPPYGFKPYDPINSA 136
L +F P +VF G+++YDT +IIKR Y + Y + +A
Sbjct: 171 LIQIFFP----LGKISEMIYGGLASLVFSGYIIYDTDNIIKR------YTYDEY--VWAA 218
Query: 135 ISVYLDVLNIFMRIAMILSGA 73
+S+YLDV+N+F+ + +L A
Sbjct: 219 VSLYLDVINLFLALLRVLRAA 239
>07_01_0553 - 4119782-4119988,4120160-4120320,4120861-4121155
Length = 220
Score = 45.6 bits (103), Expect = 3e-05
Identities = 39/139 (28%), Positives = 62/139 (44%), Gaps = 1/139 (0%)
Frame = -3
Query: 486 VIAPICFLGGPILMRAAWYTAGVVGGLSTIAV-CAPSGEFLNMRAPLAMGLGAVFAASLA 310
++AP+ + G ++ AA T G+V GL+ A G + P + V
Sbjct: 93 IVAPL--IAGIAIIEAASLTFGLVFGLTLYTFWAAKRGHDFSFLRPFLVAAFLVLVLYGL 150
Query: 309 GMFLPPTXXXXXXXXXXXXXXXLIVFGGFLLYDTQSIIKRAEMHPPYGFKPYDPINSAIS 130
L PT +VF GF++YDT ++IKR + + Y + +AIS
Sbjct: 151 IQMLVPTGKVATTVYGCVAA---LVFSGFIIYDTDNLIKR------HAYDEY--VTAAIS 199
Query: 129 VYLDVLNIFMRIAMILSGA 73
+YLD +NIF+ I L +
Sbjct: 200 LYLDTVNIFIAIFTALDAS 218
>07_01_0554 -
4121692-4121895,4121991-4122148,4123241-4123354,
4123824-4124082
Length = 244
Score = 42.3 bits (95), Expect = 3e-04
Identities = 36/140 (25%), Positives = 59/140 (42%), Gaps = 1/140 (0%)
Frame = -3
Query: 489 AVIAPICFLGGPILMRAAWYTAGVVGGLSTIAV-CAPSGEFLNMRAPLAMGLGAVFAASL 313
AV F G +++ +A T VV L+ A G + P L A L
Sbjct: 115 AVGMTCAFTSGKVILESAILTTVVVFSLTAYTFWAAKRGRDFSFLGPF---LFASLIVLL 171
Query: 312 AGMFLPPTXXXXXXXXXXXXXXXLIVFGGFLLYDTQSIIKRAEMHPPYGFKPYDPINSAI 133
F+ ++F G+++YDT +IIKR Y + Y + +A+
Sbjct: 172 VFAFIQILFPLGRISQMIYGGIASLIFSGYIVYDTDNIIKR------YTYDQY--VWAAV 223
Query: 132 SVYLDVLNIFMRIAMILSGA 73
S+YLDV+N+F+ + + A
Sbjct: 224 SLYLDVINLFLSLMTLFRAA 243
>03_05_1105 + 30438140-30438350,30438448-30438926
Length = 229
Score = 40.3 bits (90), Expect = 0.001
Identities = 35/134 (26%), Positives = 61/134 (45%), Gaps = 2/134 (1%)
Frame = -3
Query: 489 AVIAPICFLGGPILMRAAWYTAGVVGGLSTIAV-CAPSGEFLNMRAP-LAMGLGAVFAAS 316
AV F G +++ +A TA VV L+ A G + P L + + +
Sbjct: 99 AVGLTCAFTKGEVILESAILTAAVVVSLTAYTFWAARRGHDFSFLGPFLFAAVMILMVFA 158
Query: 315 LAGMFLPPTXXXXXXXXXXXXXXXLIVFGGFLLYDTQSIIKRAEMHPPYGFKPYDPINSA 136
L +F P +VF G+++YDT ++IKR Y + Y + +A
Sbjct: 159 LIQVFFP----LGRVSLMIYGGLAALVFCGYIVYDTDNLIKR------YSYDEY--VWAA 206
Query: 135 ISVYLDVLNIFMRI 94
+++YLDV+N+F+ +
Sbjct: 207 VALYLDVINLFLSL 220
>05_04_0254 -
19444409-19444621,19444724-19444887,19444974-19445087,
19446086-19446395
Length = 266
Score = 39.9 bits (89), Expect = 0.002
Identities = 35/126 (27%), Positives = 59/126 (46%), Gaps = 4/126 (3%)
Frame = -3
Query: 459 GPILMRAAWYTAGVVGGLSTIAVCAPS-GEFLNMRAPL---AMGLGAVFAASLAGMFLPP 292
G I++ A T+ VV L+ A G+ P+ A+ L V + A +F P
Sbjct: 142 GKIVLEALILTSAVVASLTAYTFWASKKGKEFGYLGPILFSALVLLVVISFIQASVFFP- 200
Query: 291 TXXXXXXXXXXXXXXXLIVFGGFLLYDTQSIIKRAEMHPPYGFKPYDPINSAISVYLDVL 112
+VF GF++YDT+++IKR + + Y I +++ +YLD+L
Sbjct: 201 ---LGSGPVALFGGLGALVFSGFIIYDTENLIKR------HTYDDY--IWASVELYLDIL 249
Query: 111 NIFMRI 94
N+F+ I
Sbjct: 250 NLFLYI 255
>11_06_0192 +
21128298-21128829,21129341-21129407,21131169-21131211,
21131301-21131367,21131613-21131770,21131863-21132057
Length = 353
Score = 37.9 bits (84), Expect = 0.006
Identities = 33/121 (27%), Positives = 53/121 (43%), Gaps = 1/121 (0%)
Frame = -3
Query: 459 GPILMRAAWYTAGVVGGLSTIAV-CAPSGEFLNMRAPLAMGLGAVFAASLAGMFLPPTXX 283
G ++++AA TA V GL+ A G P L A LA + +
Sbjct: 237 GKVVLQAAILTAVAVIGLTIFTFWAAHRGHDFTFMYPF---LAASLLVLLAYLIIQICFP 293
Query: 282 XXXXXXXXXXXXXLIVFGGFLLYDTQSIIKRAEMHPPYGFKPYDPINSAISVYLDVLNIF 103
++F F+++DT +IKR + + Y + +AIS+YLDV+N+F
Sbjct: 294 LGRAGMTIYGCLATVLFSAFIVFDTNQLIKR------HTYNEY--VIAAISLYLDVINLF 345
Query: 102 M 100
M
Sbjct: 346 M 346
>07_01_0313 + 2216498-2216953
Length = 151
Score = 34.3 bits (75), Expect = 0.079
Identities = 23/84 (27%), Positives = 39/84 (46%), Gaps = 6/84 (7%)
Frame = +2
Query: 374 SPDGAHTAIVLRP-PTTPAVYQAARIRIGPPRKQIGAMTAPIIP-VCAIHANCLAPNPGV 547
+P A A+ P PT P + A + PP + +T P +P + + A + P P V
Sbjct: 38 APAAAIPAVPAMPKPTIPTIVPAVTL---PPIPAVPKVTLPPMPAIPTVPAVTMPPMPAV 94
Query: 548 YSIPLTTMPE----PIIXPNVTIM 607
++P T+P P + PN ++
Sbjct: 95 PAVPAVTLPPMPAVPTVPPNTVVV 118
Score = 28.3 bits (60), Expect = 5.2
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = +2
Query: 473 IGAMTAPIIPVCAIHANCLAPNPGVYSIPLTTMPEPIIXPNVTIMDIHP 619
+ A+T P IP A+ L P P + ++P TMP P V + + P
Sbjct: 58 VPAVTLPPIP--AVPKVTLPPMPAIPTVPAVTMPPMPAVPAVPAVTLPP 104
>04_03_0630 -
18182681-18182931,18183397-18183463,18184899-18184964,
18185057-18185178,18185263-18185425,18186082-18186329,
18186418-18186751,18186857-18187000,18187079-18187144
Length = 486
Score = 33.9 bits (74), Expect = 0.10
Identities = 30/106 (28%), Positives = 44/106 (41%)
Frame = +2
Query: 224 NPPNTIKPPYKLSEYNPAPRALVGGRNIPARDAANTAPRPIASGARMFKNSPDGAHTAIV 403
NPPN + P + E P P + N A A T P P + + +P ++ +IV
Sbjct: 210 NPPNNTEGP--VVEETPIPEVIDEVPNNVAV-AMPTPPAPAPAPVPQ-EEAPKKSYASIV 265
Query: 404 LRPPTTPAVYQAARIRIGPPRKQIGAMTAPIIPVCAIHANCLAPNP 541
P A R PP+++ AP+ PV A +PNP
Sbjct: 266 KVMKEIPPQISAIPSRPAPPKQEKQVAPAPVAPVA--DAPTFSPNP 309
>01_06_0046 + 25943183-25943590
Length = 135
Score = 32.3 bits (70), Expect = 0.32
Identities = 27/86 (31%), Positives = 35/86 (40%), Gaps = 1/86 (1%)
Frame = +2
Query: 71 PAPDKIMAILMNIFRTSR*TDMAELIGSYGLNP*GGCISARLIIDC-VSYNKNPPNTIKP 247
PAP ++AIL T+ + + G +P GG DC V Y PP + P
Sbjct: 5 PAPVLVLAILAVAASTAAAAAIEGEVKCGGCSPCGGA-------DCPVLYPSPPPPALPP 57
Query: 248 PYKLSEYNPAPRALVGGRNIPARDAA 325
P Y+P P A G P AA
Sbjct: 58 PPPYYYYSPPPPAYYPGSYCPPPPAA 83
>07_01_0312 + 2214050-2214556
Length = 168
Score = 31.1 bits (67), Expect = 0.74
Identities = 30/101 (29%), Positives = 36/101 (35%), Gaps = 1/101 (0%)
Frame = +2
Query: 305 IPARDAANTAPRPIASGARMFKNSPDGAHTAIVLRP-PTTPAVYQAARIRIGPPRKQIGA 481
IPA AA P P P A + L P P PAV + P A
Sbjct: 56 IPAVPAATLPPMPAVPTVPNAALPPMPAVPKVALPPMPAVPAVPTVPAVPAVP-----AA 110
Query: 482 MTAPIIPVCAIHANCLAPNPGVYSIPLTTMPEPIIXPNVTI 604
P+ V A+ L P P V + L MP P VT+
Sbjct: 111 SLPPMPAVPAVPNAVLPPMPAVPKVTLPPMPSMPAVPKVTL 151
>07_01_0077 +
566895-567127,567207-567331,571204-571340,571437-571542,
571635-571885,572018-572128,572209-572320,572626-572716,
573168-573507,573678-573900,573946-574204,574274-574481,
574572-574622,574712-574870,574956-575120,575322-575399,
575732-576031,576107-576259,576871-576918,577019-577188,
577738-577852,578462-578623,578789-578893,578969-579199,
579277-579410,579484-579738,579822-580110,580214-580306,
580395-580520,580646-580897
Length = 1693
Score = 30.7 bits (66), Expect = 0.97
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = -2
Query: 376 RVLEHACSTCYGSRSCVCCISGWDVSTTY*CSWC 275
++L++ C C G R CV +S ++ Y C C
Sbjct: 563 KILKNKCCICLGGRDCVGAVSQENLQCDYACPLC 596
>06_03_0526 +
21771519-21771607,21771685-21771810,21771890-21772010,
21772123-21772851,21772954-21773349,21774594-21774665,
21774741-21774803,21775236-21775337
Length = 565
Score = 30.7 bits (66), Expect = 0.97
Identities = 17/61 (27%), Positives = 28/61 (45%)
Frame = +2
Query: 188 ARLIIDCVSYNKNPPNTIKPPYKLSEYNPAPRALVGGRNIPARDAANTAPRPIASGARMF 367
A+ ++ +S PP +PP + + + +PR + A + PRP A G RM
Sbjct: 220 AQAMLAVISTPAPPPPLWRPPRRRARSSSSPRRATAFKAYNAALSPRARPRPGAPGQRMI 279
Query: 368 K 370
K
Sbjct: 280 K 280
>05_03_0392 - 13432385-13432622,13432734-13433104
Length = 202
Score = 30.7 bits (66), Expect = 0.97
Identities = 11/38 (28%), Positives = 18/38 (47%)
Frame = -3
Query: 606 IIVTLGXMIGSGMVVRGMEYTPGFGAKQLAWMAHTGIM 493
++V G ++G G V G EY G + W H ++
Sbjct: 21 VVVDRGEVVGGGGKVEGREYVGGLAGHLVVWAPHIALL 58
>03_01_0092 - 731069-731434,731569-733080
Length = 625
Score = 30.7 bits (66), Expect = 0.97
Identities = 15/45 (33%), Positives = 20/45 (44%)
Frame = +2
Query: 386 AHTAIVLRPPTTPAVYQAARIRIGPPRKQIGAMTAPIIPVCAIHA 520
A + + PP TPA A R+ PP + AP PV + A
Sbjct: 62 APAPVAVAPPATPAGLSALRVHASPPPPPVKQHAAPPPPVMDVAA 106
>12_02_0223 + 15868889-15869182
Length = 97
Score = 30.3 bits (65), Expect = 1.3
Identities = 9/13 (69%), Positives = 12/13 (92%)
Frame = -2
Query: 130 CLSGCSEYIHENC 92
CL+GCS+Y H+NC
Sbjct: 84 CLTGCSDYCHKNC 96
>03_04_0042 -
16743440-16743454,16743907-16744002,16744257-16744475,
16744830-16744910,16745092-16745187,16745981-16746045,
16746131-16746217,16746522-16746720
Length = 285
Score = 30.3 bits (65), Expect = 1.3
Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +2
Query: 272 PAPRALVGGRNIPARDAANTAPRP-IASGARMFKNSPDGAHTAIVLR 409
P P AL+ GR+ R P P +AS AR+ + A TA+V+R
Sbjct: 2 PPPTALLPGRSAAPRPPPPPPPPPQLASAARLSRRPLFNAATAVVVR 48
>11_02_0082 -
8088169-8088284,8088613-8088697,8090344-8090442,
8090537-8090609,8090694-8090804,8090901-8091074,
8091184-8091574,8091662-8092283,8092379-8093251,
8093294-8093800
Length = 1016
Score = 29.5 bits (63), Expect = 2.3
Identities = 22/79 (27%), Positives = 30/79 (37%)
Frame = +2
Query: 305 IPARDAANTAPRPIASGARMFKNSPDGAHTAIVLRPPTTPAVYQAARIRIGPPRKQIGAM 484
+P R AA+ AP P A + +P H + P PA + PPR
Sbjct: 529 LPGRQAASRAPSPPAPPSPPQDPAPSPPHDPLAPSLPQAPAATPPQDPALTPPRAP--TP 586
Query: 485 TAPIIPVCAIHANCLAPNP 541
T P P+ A + P P
Sbjct: 587 TPPQAPLPAPSKSRAPPTP 605
>02_05_0607 -
30315982-30316215,30316688-30316831,30316902-30316989,
30317829-30317934,30318398-30318552,30318630-30318699,
30319940-30320106,30320827-30320894,30322764-30322867,
30322937-30323107,30323113-30323238,30323496-30323663,
30323725-30323908,30324139-30324534
Length = 726
Score = 29.5 bits (63), Expect = 2.3
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = -3
Query: 444 RAAWYTAGVVGGLSTIAVCAPSGEFLNMRAPLAMGLGAVFAASL 313
R + +T G+ GG IAV SG R+PL++ + A L
Sbjct: 410 RVSKWTLGLQGGGEQIAVIRASGSITRTRSPLSVPSSGIIAEQL 453
>01_06_1153 -
34942608-34942975,34943082-34943330,34943516-34943625,
34944698-34944771,34945237-34945306,34945848-34945947,
34946045-34946120,34946572-34946646,34947067-34947156,
34947238-34947354,34947457-34947567,34947649-34947788,
34947962-34948043,34948224-34948303,34948938-34949046,
34949295-34949417,34949972-34950044,34950338-34950489,
34951029-34951127,34952258-34952383
Length = 807
Score = 29.5 bits (63), Expect = 2.3
Identities = 21/72 (29%), Positives = 29/72 (40%), Gaps = 3/72 (4%)
Frame = +2
Query: 251 YKLSEYNPAPRALVGGRNIPARDAANTAPRPIASGARMFKNSPDG---AHTAIVLRPPTT 421
+ LS NP R LV GRN R P ++ PDG HT ++ P T
Sbjct: 51 FSLSGSNPQDRHLVAGRNGVKRLRTVRHPNILSFLHSTEAEVPDGPAMKHTIYIVTEPVT 110
Query: 422 PAVYQAARIRIG 457
P + + +G
Sbjct: 111 PLSEKLKELNLG 122
>11_01_0059 -
444991-446908,447595-448218,448431-448861,450974-452293
Length = 1430
Score = 29.1 bits (62), Expect = 3.0
Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 4/55 (7%)
Frame = +2
Query: 410 PPTTPAVYQAARIRI----GPPRKQIGAMTAPIIPVCAIHANCLAPNPGVYSIPL 562
PP T + A +R+ G + A+T+ + + A+ +CL PNP +IP+
Sbjct: 806 PPLTVKLLHARLLRLDLLAGLSSLLLRALTSSALHLHALRVHCLLPNPSHLTIPI 860
>03_01_0417 -
3197956-3198438,3198550-3200001,3200116-3200277,
3200351-3201133
Length = 959
Score = 29.1 bits (62), Expect = 3.0
Identities = 17/80 (21%), Positives = 36/80 (45%), Gaps = 1/80 (1%)
Frame = +2
Query: 221 KNPPNTIKPPYKLSEYNPAPRALVGGRNIPARDAANTAPRPIAS-GARMFKNSPDGAHTA 397
++ P + P+ + P LVG + NT+ P+ R+F ++P+ ++
Sbjct: 39 EDAPVVVTVPFPFIDGKPKS-VLVGETSADTISIENTSSEPVNLWSVRIFSSNPEDSYVL 97
Query: 398 IVLRPPTTPAVYQAARIRIG 457
+++PP +A R +G
Sbjct: 98 SMMKPPLNDTDEEAKRNFLG 117
>01_05_0710 + 24492337-24493053
Length = 238
Score = 29.1 bits (62), Expect = 3.0
Identities = 33/115 (28%), Positives = 44/115 (38%), Gaps = 6/115 (5%)
Frame = +2
Query: 173 GGCISARLIIDCVSYNKNPPNTIKPPYKLSEYNP------APRALVGGRNIPARDAANTA 334
GG I R++ + P + PPY LS + PR LV N+PA TA
Sbjct: 18 GGAIPHRVLRGACT---TAPASRPPPYPLSPSDLDAVSALLPR-LVSAGNVPAAGRLLTA 73
Query: 335 PRPIASGARMFKNSPDGAHTAIVLRPPTTPAVYQAARIRIGPPRKQIGAMTAPII 499
+ SP AH A + P TPA IR P R + P++
Sbjct: 74 ALLLPGSTERLPFSPLAAHLASM--PTLTPAFALLTAIRHHPLRPSPLPLATPLL 126
>11_06_0491 - 24298220-24299058,24299085-24299519,24299606-24299747
Length = 471
Score = 28.7 bits (61), Expect = 3.9
Identities = 19/48 (39%), Positives = 27/48 (56%)
Frame = -3
Query: 441 AAWYTAGVVGGLSTIAVCAPSGEFLNMRAPLAMGLGAVFAASLAGMFL 298
AA + A V+G T+ + + FL M LAM LGA +AA +A F+
Sbjct: 87 AAGWAADVLGRRGTLVL---ANAFL-MAGALAMSLGATYAALMAARFV 130
>07_03_0561 +
19485218-19485242,19485323-19486467,19487354-19487476,
19487553-19487626,19487886-19487946,19488285-19488370,
19488795-19488864,19489026-19489122,19489342-19489481,
19490225-19490308,19490313-19490346,19491833-19491951
Length = 685
Score = 28.7 bits (61), Expect = 3.9
Identities = 16/41 (39%), Positives = 22/41 (53%)
Frame = +2
Query: 392 TAIVLRPPTTPAVYQAARIRIGPPRKQIGAMTAPIIPVCAI 514
TA LRPP P +AA G P++ +G T + PV A+
Sbjct: 200 TARRLRPPAPPPRRRAASSSQGQPKRWVGC-TLVVCPVVAV 239
>02_01_0491 + 3548602-3548901
Length = 99
Score = 28.7 bits (61), Expect = 3.9
Identities = 23/67 (34%), Positives = 32/67 (47%)
Frame = -3
Query: 582 IGSGMVVRGMEYTPGFGAKQLAWMAHTGIMGAVIAPICFLGGPILMRAAWYTAGVVGGLS 403
+G G T G GA L W A ++GAV P + +L+ A+ AGV L
Sbjct: 16 LGGGAPFLFRSRTIGVGAIFLMWGASAIVLGAVPEPAIPI-AHMLLSFAFLMAGV--ALL 72
Query: 402 TIAVCAP 382
T++V AP
Sbjct: 73 TLSVAAP 79
>07_01_0979 - 8270980-8271654,8271984-8272088
Length = 259
Score = 28.3 bits (60), Expect = 5.2
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -2
Query: 490 SCHCSNLLPWWPNP 449
SCHC + WW NP
Sbjct: 245 SCHCQRVKHWWRNP 258
>07_01_0310 + 2209084-2209554
Length = 156
Score = 28.3 bits (60), Expect = 5.2
Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
Frame = +2
Query: 395 AIVLRP-PTTPAVYQAARIRIGPPRKQIGAMTAPIIP-VCAIHANCLAPNPGVYSIPLTT 568
A+ L P P PAV A PP + A+ ++P + A+ L P P + ++P T
Sbjct: 83 AVALPPMPAVPAVPTATL----PPMPAVPAVPNAVLPPIPAVPKVTLPPMPSIPAVPKVT 138
Query: 569 MP 574
+P
Sbjct: 139 LP 140
>02_05_1147 -
34447519-34448042,34448126-34449092,34449458-34449657,
34449867-34450051,34450130-34450228,34450316-34450357,
34450516-34450860,34450956-34451101,34451213-34451296,
34451424-34451502,34451596-34451675,34451824-34451875,
34451992-34452026
Length = 945
Score = 28.3 bits (60), Expect = 5.2
Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 3/66 (4%)
Frame = +2
Query: 410 PPTTPAVYQAARIRIGPPRKQIGAMTAPIIPVCAIHA---NCLAPNPGVYSIPLTTMPEP 580
PPT P V PR + + P+ P A+++ + P+P + S+ L ++P+P
Sbjct: 363 PPTHPEVNGFDEF---DPRGSVPDTSPPVNPSQAVNSLEMDLFGPDP-INSLALVSVPQP 418
Query: 581 IIXPNV 598
PNV
Sbjct: 419 TASPNV 424
>01_06_1396 +
37014872-37015220,37015276-37015460,37015539-37015892,
37016250-37016525
Length = 387
Score = 28.3 bits (60), Expect = 5.2
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +2
Query: 233 NTIKPPYKLSEYNPAPRALVGGRNIPARDAANTAPRPIASG 355
+ I+P L +++ P L G N+ A+D +TA ASG
Sbjct: 291 DAIQPQLALDKHHKIPDELSGEANMAAQDGNHTATAAAASG 331
>11_06_0492 - 24304313-24305263,24305375-24305721,24305793-24305931
Length = 478
Score = 27.9 bits (59), Expect = 6.9
Identities = 19/48 (39%), Positives = 26/48 (54%)
Frame = -3
Query: 441 AAWYTAGVVGGLSTIAVCAPSGEFLNMRAPLAMGLGAVFAASLAGMFL 298
AA + A +G TI + + FL M LAM LGA +AA +A F+
Sbjct: 86 AAGWAADTLGRRGTIVL---ANAFL-MAGALAMSLGATYAALMAARFV 129
>08_02_1072 +
24114656-24114997,24115100-24115333,24115487-24115552,
24115661-24115729,24115826-24115903,24116025-24116219,
24116551-24116664
Length = 365
Score = 27.9 bits (59), Expect = 6.9
Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 4/60 (6%)
Frame = -3
Query: 459 GPILMRAAWYTAGVVGGLSTIA----VCAPSGEFLNMRAPLAMGLGAVFAASLAGMFLPP 292
G + M W+ + GG S A V P+ + L + ++ GA AAS AG LPP
Sbjct: 20 GGMAMAWQWHGGQMSGGSSCAAAPPPVQQPAMDSLAWSSTVSPSTGAATAASGAGFLLPP 79
>07_03_1398 -
26271034-26271131,26271314-26271425,26271750-26271793,
26272158-26272485,26272569-26272982
Length = 331
Score = 27.9 bits (59), Expect = 6.9
Identities = 14/43 (32%), Positives = 18/43 (41%)
Frame = +2
Query: 377 PDGAHTAIVLRPPTTPAVYQAARIRIGPPRKQIGAMTAPIIPV 505
P H PP Y A+R+RIG K+ TA + V
Sbjct: 122 PVRRHARAHFGPPVDVKAYDASRVRIGSSGKETTTATAAAVEV 164
>03_06_0145 - 31973924-31975837
Length = 637
Score = 27.9 bits (59), Expect = 6.9
Identities = 20/66 (30%), Positives = 31/66 (46%)
Frame = +2
Query: 305 IPARDAANTAPRPIASGARMFKNSPDGAHTAIVLRPPTTPAVYQAARIRIGPPRKQIGAM 484
+P + AP P + + + DG H + + PP TPAV A+R PP ++
Sbjct: 362 VPPLTTVSAAPPPPPTTSEV-----DGEHESSIRSPP-TPAVVAASRATNPPPPRR-RTS 414
Query: 485 TAPIIP 502
AP +P
Sbjct: 415 RAPRLP 420
>01_05_0650 +
23925913-23926025,23926128-23926388,23927431-23927449,
23927526-23927745,23927871-23928052,23928158-23928447,
23928621-23928750,23928888-23929235
Length = 520
Score = 27.9 bits (59), Expect = 6.9
Identities = 24/74 (32%), Positives = 32/74 (43%), Gaps = 6/74 (8%)
Frame = -3
Query: 504 TGIMGAVIAPICFLGGPILMRAAWYTAG---VVGGLSTIAVCA---PSGEFLNMRAPLAM 343
TGI + F GGP M W+ AG + GLS +C+ SG A L+
Sbjct: 54 TGITTLYNTGLSF-GGPATMTFGWFVAGAFTMTVGLSMAEICSSFPTSGGLYYWSARLSG 112
Query: 342 GLGAVFAASLAGMF 301
A FA+ + G F
Sbjct: 113 KRWAPFASWITGWF 126
>11_06_0493 - 24310412-24311362,24311437-24311783,24311857-24311989
Length = 476
Score = 27.5 bits (58), Expect = 9.1
Identities = 18/48 (37%), Positives = 27/48 (56%)
Frame = -3
Query: 441 AAWYTAGVVGGLSTIAVCAPSGEFLNMRAPLAMGLGAVFAASLAGMFL 298
AA + A V+G T+ + + +L M LAM LGA +AA +A F+
Sbjct: 84 AAGWAADVLGRRGTLVL---ANAYL-MAGALAMSLGATYAALMAARFV 127
>02_05_1322 - 35698314-35698322,35698537-35698619,35699685-35699823
Length = 76
Score = 27.5 bits (58), Expect = 9.1
Identities = 20/69 (28%), Positives = 32/69 (46%)
Frame = +1
Query: 10 AGQHNASNPIVIFRLLPPVATSSRQDHGNSHEYIQNIQINRYGRIDWVIWFESVGWMHLG 189
AG H NP+ V + + D N E+I NI +N D+++ FE+ L
Sbjct: 4 AGGHGMGNPV-------NVGIAVQADWEN-REFISNISLNVRRLFDFLLRFEATTKSKLA 55
Query: 190 AFNNRLRIV 216
+ N +L I+
Sbjct: 56 SLNEKLDIL 64
>02_01_0313 + 2097302-2097657,2099389-2100502
Length = 489
Score = 27.5 bits (58), Expect = 9.1
Identities = 7/16 (43%), Positives = 9/16 (56%)
Frame = -2
Query: 580 WFWHGSKRNGVHTWIW 533
W+WHG V W+W
Sbjct: 5 WWWHGRAAAAVACWVW 20
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,854,093
Number of Sequences: 37544
Number of extensions: 479853
Number of successful extensions: 1590
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 1510
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1578
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1502076244
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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